RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W MNE1P24720 663 aa2.62□□□□□ -1.99
HRD3YLR207W SWI4P25302 1093 aaKnown RBP2.62□□□□□ -1.99
HRD3YLR207W SET3P36124 751 aa2.62□□□□□ -1.99
HRD3YLR207W MEF2P39677 819 aa2.62□□□□□ -1.99
HRD3YLR207W YNL195CP40168 261 aa2.62□□□□□ -1.99
HRD3YLR207W GID8P40208 455 aa2.62□□□□□ -1.99
HRD3YLR207W YJR061WP40355 935 aa2.62□□□□□ -1.99
HRD3YLR207W BUD8P41698 603 aa2.62□□□□□ -1.99
HRD3YLR207W TAH11P47112 604 aa2.62□□□□□ -1.99
HRD3YLR207W NCS6P53088 359 aa2.62□□□□□ -1.99
HRD3YLR207W RRT6P53117 311 aaPredicted RBP2.62□□□□□ -1.99
HRD3YLR207W HEF3P53978 1044 aaKnown RBP2.62□□□□□ -1.99
HRD3YLR207W VPS36Q06696 566 aa2.62□□□□□ -1.99
HRD3YLR207W ACK1Q07622 623 aaPredicted RBP2.62□□□□□ -1.99
HRD3YLR207W HMI1Q12039 706 aa2.62□□□□□ -1.99
HRD3YLR207W RTK1Q12100 620 aaPredicted RBP2.62□□□□□ -1.99
HRD3YLR207W COX17Q12287 69 aa2.62□□□□□ -1.99
HRD3YLR207W POM34Q12445 299 aa2.62□□□□□ -1.99
HRD3YLR207W YOR111WQ99210 232 aa2.62□□□□□ -1.99
HRD3YLR207W YIL177CP40434 1758 aa2.62□□□□□ -1.99
HRD3YLR207W YJL225CP40889 1758 aa2.62□□□□□ -1.99
HRD3YLR207W YRF1-2P40105 1681 aa2.61□□□□□ -1.99
HRD3YLR207W ARG3P05150 338 aa2.61□□□□□ -1.99
HRD3YLR207W ADE3P07245 946 aaKnown RBP2.61□□□□□ -1.99
HRD3YLR207W HMG2P12684 1045 aa2.61□□□□□ -1.99
HRD3YLR207W NUP133P36161 1157 aa2.61□□□□□ -1.99
HRD3YLR207W YBR138CP38277 524 aa2.61□□□□□ -1.99
HRD3YLR207W YHR112CP38716 378 aa2.61□□□□□ -1.99
HRD3YLR207W UTP9P38882 575 aaKnown RBP2.61□□□□□ -1.99
HRD3YLR207W YJL068CP40363 299 aa2.61□□□□□ -1.99
HRD3YLR207W CAB2P40506 365 aa2.61□□□□□ -1.99
HRD3YLR207W RMD8P43620 662 aa2.61□□□□□ -1.99
HRD3YLR207W CHA4P43634 648 aa2.61□□□□□ -1.99
HRD3YLR207W BIT61P47041 543 aa2.61□□□□□ -1.99
HRD3YLR207W PEF1P53238 335 aa2.61□□□□□ -1.99
HRD3YLR207W YNL050CP53952 270 aa2.61□□□□□ -1.99
HRD3YLR207W CTF4Q01454 927 aa2.61□□□□□ -1.99
HRD3YLR207W ATG21Q02887 496 aa2.61□□□□□ -1.99
HRD3YLR207W RMT2Q03305 412 aa2.61□□□□□ -1.99
HRD3YLR207W CRD1Q07560 283 aa2.61□□□□□ -1.99
HRD3YLR207W YBR126W-AQ8TGU7 68 aa2.61□□□□□ -1.99
HRD3YLR207W ROM2P51862 1356 aaKnown RBP2.61□□□□□ -1.99
HRD3YLR207W PMS1P14242 873 aa2.61□□□□□ -1.99
HRD3YLR207W TRX1P22217 103 aaKnown RBP2.61□□□□□ -1.99
HRD3YLR207W GCD7P32502 381 aaPredicted RBP2.61□□□□□ -1.99
HRD3YLR207W POL12P38121 705 aaPredicted RBP2.61□□□□□ -1.99
HRD3YLR207W YBL029WP38201 376 aa2.61□□□□□ -1.99
HRD3YLR207W GDI1P39958 451 aaKnown RBP2.61□□□□□ -1.99
HRD3YLR207W FKH2P41813 862 aa2.61□□□□□ -1.99
HRD3YLR207W YNR071CP53757 342 aa2.61□□□□□ -1.99
HRD3YLR207W MRPL22P53881 309 aa2.61□□□□□ -1.99
HRD3YLR207W GCN5Q03330 439 aa2.61□□□□□ -1.99
HRD3YLR207W PRP3Q03338 469 aaPredicted RBP2.61□□□□□ -1.99
HRD3YLR207W YAP6Q03935 383 aa2.61□□□□□ -1.99
HRD3YLR207W AAD4Q07747 329 aa2.61□□□□□ -1.99
HRD3YLR207W PGC1Q08959 321 aa2.61□□□□□ -1.99
HRD3YLR207W TGL5Q12043 749 aa2.61□□□□□ -1.99
HRD3YLR207W SMF3Q12078 473 aaPredicted RBP2.61□□□□□ -1.99
HRD3YLR207W GPR1Q12361 961 aa2.61□□□□□ -1.99
HRD3YLR207W URA3P03962 267 aa2.6□□□□□ -1.99
HRD3YLR207W MET3P08536 511 aa2.6□□□□□ -1.99
HRD3YLR207W TUB3P09734 445 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W CDC24P11433 854 aaPredicted RBP2.6□□□□□ -1.99
HRD3YLR207W MDL1P33310 695 aa2.6□□□□□ -1.99
HRD3YLR207W SFB3P38810 929 aa2.6□□□□□ -1.99
HRD3YLR207W PLB1P39105 664 aa2.6□□□□□ -1.99
HRD3YLR207W VFA1P40080 203 aa2.6□□□□□ -1.99
HRD3YLR207W PIG2P40187 538 aa2.6□□□□□ -1.99
HRD3YLR207W MAD2P40958 196 aa2.6□□□□□ -1.99
HRD3YLR207W EAF6P47128 113 aa2.6□□□□□ -1.99
HRD3YLR207W DUO1P53168 247 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W ART5P53244 586 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W VPS62P53285 467 aa2.6□□□□□ -1.99
HRD3YLR207W OGG1P53397 376 aaPredicted RBP2.6□□□□□ -1.99
HRD3YLR207W ARE2P53629 642 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W VPS9P54787 451 aa2.6□□□□□ -1.99
HRD3YLR207W CIK1Q01649 594 aa2.6□□□□□ -1.99
HRD3YLR207W RCR2Q03446 210 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W VTI1Q04338 217 aa2.6□□□□□ -1.99
HRD3YLR207W DIN7Q12086 430 aa2.6□□□□□ -1.99
HRD3YLR207W LYS21Q12122 440 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W HSP42Q12329 375 aa2.6□□□□□ -1.99
HRD3YLR207W TPM1P17536 199 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W OLE1P21147 510 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W IME1P21190 360 aa2.6□□□□□ -1.99
HRD3YLR207W PRE4P30657 266 aa2.6□□□□□ -1.99
HRD3YLR207W CBF2P32504 956 aa2.6□□□□□ -1.99
HRD3YLR207W PUB1P32588 453 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
HRD3YLR207W SAC6P32599 642 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W RAD24P32641 659 aa2.6□□□□□ -1.99
HRD3YLR207W RMA1P36001 430 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W YKR073CP36153 106 aa2.6□□□□□ -1.99
HRD3YLR207W APE3P37302 537 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W FSH1P38777 243 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W NOP9P47077 666 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W PSP1P50896 841 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W TEL2P53038 688 aa2.6□□□□□ -1.99
HRD3YLR207W TEX1P53851 422 aaKnown RBP2.6□□□□□ -1.99
HRD3YLR207W SEC5P89102 971 aa2.6□□□□□ -1.99
HRD3YLR207W ACS1Q01574 713 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms