RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C WAR1Q03631 944 aa3.84□□□□□ -1.79
ATG27YJL178C ORM2Q06144 216 aa3.84□□□□□ -1.79
ATG27YJL178C HIM1Q06674 414 aa3.84□□□□□ -1.79
ATG27YJL178C AFT2Q08957 416 aa3.84□□□□□ -1.79
ATG27YJL178C NYV1Q12255 253 aa3.84□□□□□ -1.79
ATG27YJL178C SEC3P33332 1336 aaKnown RBP3.84□□□□□ -1.79
ATG27YJL178C GSY2P27472 705 aa3.83□□□□□ -1.8
ATG27YJL178C CDC5P32562 705 aa3.83□□□□□ -1.8
ATG27YJL178C RRP8P38961 392 aaKnown RBP3.83□□□□□ -1.8
ATG27YJL178C VFA1P40080 203 aa3.83□□□□□ -1.8
ATG27YJL178C QRI7P43122 407 aa3.83□□□□□ -1.8
ATG27YJL178C POL31P46957 487 aa3.83□□□□□ -1.8
ATG27YJL178C IDS2P46958 469 aa3.83□□□□□ -1.8
ATG27YJL178C YJL043WP47053 257 aa3.83□□□□□ -1.8
ATG27YJL178C YNL092WP53934 400 aa3.83□□□□□ -1.8
ATG27YJL178C TRS31Q03337 283 aa3.83□□□□□ -1.8
ATG27YJL178C MLC2Q06580 163 aa3.83□□□□□ -1.8
ATG27YJL178C PCL8Q08966 492 aa3.83□□□□□ -1.8
ATG27YJL178C YLR419WQ06698 1435 aaKnown RBP3.83□□□□□ -1.8
ATG27YJL178C MHP1P43638 1398 aa3.82□□□□□ -1.8
ATG27YJL178C RAD9P14737 1309 aa3.82□□□□□ -1.8
ATG27YJL178C ATP4P05626 244 aa3.82□□□□□ -1.8
ATG27YJL178C AQY1P0CD91 305 aa3.82□□□□□ -1.8
ATG27YJL178C YEF3P16521 1044 aaKnown RBP3.82□□□□□ -1.8
ATG27YJL178C PTP2P29461 750 aa3.82□□□□□ -1.8
ATG27YJL178C YLF2P38746 405 aa3.82□□□□□ -1.8
ATG27YJL178C YAP3P38749 330 aa3.82□□□□□ -1.8
ATG27YJL178C EXO1P39875 702 aa3.82□□□□□ -1.8
ATG27YJL178C RAD26P40352 1085 aa3.82□□□□□ -1.8
ATG27YJL178C TEP1P53916 434 aa3.82□□□□□ -1.8
ATG27YJL178C AAD4Q07747 329 aa3.82□□□□□ -1.8
ATG27YJL178C MSS18P08593 268 aa3.81□□□□□ -1.8
ATG27YJL178C PTP1P25044 335 aa3.81□□□□□ -1.8
ATG27YJL178C STT3P39007 718 aaKnown RBP3.81□□□□□ -1.8
ATG27YJL178C ARB1P40024 610 aaKnown RBP3.81□□□□□ -1.8
ATG27YJL178C ATP23P53722 227 aa3.81□□□□□ -1.8
ATG27YJL178C YML119WQ03208 357 aa3.81□□□□□ -1.8
ATG27YJL178C BRE1Q07457 700 aaKnown RBP3.81□□□□□ -1.8
ATG27YJL178C ICL2Q12031 575 aa3.81□□□□□ -1.8
ATG27YJL178C CTT1P06115 562 aa3.8□□□□□ -1.8
ATG27YJL178C PIF1P07271 859 aa3.8□□□□□ -1.8
ATG27YJL178C SEC18P18759 758 aaKnown RBP3.8□□□□□ -1.8
ATG27YJL178C SWI4P25302 1093 aaKnown RBP3.8□□□□□ -1.8
ATG27YJL178C GDA1P32621 518 aa3.8□□□□□ -1.8
ATG27YJL178C APM3P38153 483 aa3.8□□□□□ -1.8
ATG27YJL178C YHL041WP38730 149 aa3.8□□□□□ -1.8
ATG27YJL178C ARO9P38840 513 aaPredicted RBP3.8□□□□□ -1.8
ATG27YJL178C MAM1P40065 302 aa3.8□□□□□ -1.8
ATG27YJL178C LAS21P40367 830 aa3.8□□□□□ -1.8
ATG27YJL178C XBP1P40489 647 aa3.8□□□□□ -1.8
ATG27YJL178C ULP2P40537 1034 aaPredicted RBP3.8□□□□□ -1.8
ATG27YJL178C NET1P47035 1189 aa3.8□□□□□ -1.8
ATG27YJL178C SPN1Q06505 410 aaPredicted RBP3.8□□□□□ -1.8
ATG27YJL178C BSP1Q06604 576 aa3.8□□□□□ -1.8
ATG27YJL178C CRD1Q07560 283 aa3.8□□□□□ -1.8
ATG27YJL178C RDL1Q12305 139 aaKnown RBP3.8□□□□□ -1.8
ATG27YJL178C FRE7Q12333 620 aa3.8□□□□□ -1.8
ATG27YJL178C ICT1Q12385 394 aa3.8□□□□□ -1.8
ATG27YJL178C AHA1Q12449 350 aaKnown RBP3.8□□□□□ -1.8
ATG27YJL178C DNF3Q12674 1656 aa3.8□□□□□ -1.8
ATG27YJL178C BCK1Q01389 1478 aa3.79□□□□□ -1.8
ATG27YJL178C SPE2P21182 396 aa3.79□□□□□ -1.8
ATG27YJL178C AMD2P22580 549 aa3.79□□□□□ -1.8
ATG27YJL178C YJU2P28320 278 aaPredicted RBP3.79□□□□□ -1.8
ATG27YJL178C FRD1P32614 470 aaKnown RBP3.79□□□□□ -1.8
ATG27YJL178C BEM3P32873 1128 aa3.79□□□□□ -1.8
ATG27YJL178C PRS1P32895 427 aaKnown RBP3.79□□□□□ -1.8
ATG27YJL178C ESL2P36168 1195 aa3.79□□□□□ -1.8
ATG27YJL178C MTG2P38860 518 aa3.79□□□□□ -1.8
ATG27YJL178C VPS8P39702 1274 aa3.79□□□□□ -1.8
ATG27YJL178C BPL1P48445 690 aaPredicted RBP3.79□□□□□ -1.8
ATG27YJL178C TAN1P53072 289 aaPredicted RBP3.79□□□□□ -1.8
ATG27YJL178C YNL058CP53947 316 aa3.79□□□□□ -1.8
ATG27YJL178C VPS64Q03944 604 aa3.79□□□□□ -1.8
ATG27YJL178C PDS5Q04264 1277 aa3.79□□□□□ -1.8
ATG27YJL178C CRF1Q04930 467 aa3.79□□□□□ -1.8
ATG27YJL178C Q0010Q9ZZX9 128 aa3.79□□□□□ -1.8
ATG27YJL178C CHO2P05374 869 aaKnown RBP3.78□□□□□ -1.8
ATG27YJL178C APA1P16550 321 aaKnown RBP3.78□□□□□ -1.8
ATG27YJL178C YCR061WP25639 631 aa3.78□□□□□ -1.8
ATG27YJL178C MSH1P25846 959 aa3.78□□□□□ -1.8
ATG27YJL178C TMT1P32643 299 aa3.78□□□□□ -1.8
ATG27YJL178C SPC72P39723 622 aa3.78□□□□□ -1.8
ATG27YJL178C PSA1P41940 361 aaKnown RBP3.78□□□□□ -1.8
ATG27YJL178C SNO3P43544 222 aa3.78□□□□□ -1.8
ATG27YJL178C BST1P43571 1029 aa3.78□□□□□ -1.8
ATG27YJL178C SAE2P46946 345 aa3.78□□□□□ -1.8
ATG27YJL178C NMD5P46970 1048 aa3.78□□□□□ -1.8
ATG27YJL178C GLO1P50107 326 aa3.78□□□□□ -1.8
ATG27YJL178C COG2P53271 262 aa3.78□□□□□ -1.8
ATG27YJL178C ESF2P53743 316 aaKnown RBP3.78□□□□□ -1.8
ATG27YJL178C UBP16Q02863 499 aa3.78□□□□□ -1.8
ATG27YJL178C RAD33Q04231 177 aa3.78□□□□□ -1.8
ATG27YJL178C RRP6Q12149 733 aaKnown RBP3.78□□□□□ -1.8
ATG27YJL178C KRE5P22023 1365 aa3.77□□□□□ -1.81
ATG27YJL178C YML133CQ03099 1374 aa3.77□□□□□ -1.81
ATG27YJL178C YLL067CQ07888 1374 aa3.77□□□□□ -1.81
ATG27YJL178C YLL066CQ99208 1374 aa3.77□□□□□ -1.81
ATG27YJL178C BI2P03873 423 aa3.77□□□□□ -1.81
ATG27YJL178C ADE3P07245 946 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms