RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W RPS7AP26786 190 aaKnown RBP2.89□□□□□ -1.95
PEP8YJL053W PRP45P28004 379 aaPredicted RBP2.89□□□□□ -1.95
PEP8YJL053W SWC3P31376 625 aa2.89□□□□□ -1.95
PEP8YJL053W SLX1P38324 304 aa2.89□□□□□ -1.95
PEP8YJL053W GND1P38720 489 aaKnown RBP2.89□□□□□ -1.95
PEP8YJL053W TES1P41903 349 aaKnown RBP2.89□□□□□ -1.95
PEP8YJL053W SKP2P42843 763 aa2.89□□□□□ -1.95
PEP8YJL053W MAD3P47074 515 aa2.89□□□□□ -1.95
PEP8YJL053W SAP4P53036 818 aa2.89□□□□□ -1.95
PEP8YJL053W AAC1P04710 309 aa2.88□□□□□ -1.95
PEP8YJL053W PGI1P12709 554 aaKnown RBP2.88□□□□□ -1.95
PEP8YJL053W STB5P38699 743 aa2.88□□□□□ -1.95
PEP8YJL053W YHL041WP38730 149 aa2.88□□□□□ -1.95
PEP8YJL053W STT3P39007 718 aaKnown RBP2.88□□□□□ -1.95
PEP8YJL053W LAS21P40367 830 aa2.88□□□□□ -1.95
PEP8YJL053W SAD1P43589 448 aa2.88□□□□□ -1.95
PEP8YJL053W POL31P46957 487 aa2.88□□□□□ -1.95
PEP8YJL053W COS12P53053 380 aa2.88□□□□□ -1.95
PEP8YJL053W HIM1Q06674 414 aa2.88□□□□□ -1.95
PEP8YJL053W BRE1Q07457 700 aaKnown RBP2.88□□□□□ -1.95
PEP8YJL053W ATX2Q12067 313 aa2.88□□□□□ -1.95
PEP8YJL053W MSS18P08593 268 aa2.87□□□□□ -1.95
PEP8YJL053W POL3P15436 1097 aa2.87□□□□□ -1.95
PEP8YJL053W SIR1P21691 654 aa2.87□□□□□ -1.95
PEP8YJL053W CDC5P32562 705 aa2.87□□□□□ -1.95
PEP8YJL053W MRS6P32864 603 aaKnown RBP2.87□□□□□ -1.95
PEP8YJL053W MRPL36P36531 177 aa2.87□□□□□ -1.95
PEP8YJL053W MAM1P40065 302 aa2.87□□□□□ -1.95
PEP8YJL053W VRG4P40107 337 aa2.87□□□□□ -1.95
PEP8YJL053W RAD26P40352 1085 aa2.87□□□□□ -1.95
PEP8YJL053W YIL152WP40455 235 aa2.87□□□□□ -1.95
PEP8YJL053W CAB2P40506 365 aa2.87□□□□□ -1.95
PEP8YJL053W ACS1Q01574 713 aa2.87□□□□□ -1.95
PEP8YJL053W YMR317WQ04893 1140 aa2.87□□□□□ -1.95
PEP8YJL053W IWR1Q07532 353 aaPredicted RBP2.87□□□□□ -1.95
PEP8YJL053W AHA1Q12449 350 aaKnown RBP2.87□□□□□ -1.95
PEP8YJL053W YER175W-AQ8TGU4 54 aa2.87□□□□□ -1.95
PEP8YJL053W YPK1P12688 680 aaKnown RBP2.86□□□□□ -1.95
PEP8YJL053W PDE1P22434 369 aa2.86□□□□□ -1.95
PEP8YJL053W YCR061WP25639 631 aa2.86□□□□□ -1.95
PEP8YJL053W DPB3P27344 201 aa2.86□□□□□ -1.95
PEP8YJL053W PRE2P30656 287 aaKnown RBP2.86□□□□□ -1.95
PEP8YJL053W GCD7P32502 381 aaPredicted RBP2.86□□□□□ -1.95
PEP8YJL053W YPT10P38146 199 aa2.86□□□□□ -1.95
PEP8YJL053W ACA1P39970 489 aa2.86□□□□□ -1.95
PEP8YJL053W YIL169CP40442 995 aa2.86□□□□□ -1.95
PEP8YJL053W COG2P53271 262 aa2.86□□□□□ -1.95
PEP8YJL053W CPR6P53691 371 aaKnown RBP2.86□□□□□ -1.95
PEP8YJL053W YPL108WQ02872 168 aaPredicted RBP2.86□□□□□ -1.95
PEP8YJL053W ATG21Q02887 496 aa2.86□□□□□ -1.95
PEP8YJL053W CRF1Q04930 467 aa2.86□□□□□ -1.95
PEP8YJL053W EIS1Q05050 843 aaKnown RBP2.86□□□□□ -1.95
PEP8YJL053W HRD3Q05787 833 aa2.86□□□□□ -1.95
PEP8YJL053W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
PEP8YJL053W YPT1P01123 206 aaKnown RBP2.85□□□□□ -1.95
PEP8YJL053W SEC18P18759 758 aaKnown RBP2.85□□□□□ -1.95
PEP8YJL053W MSM1P22438 575 aa2.85□□□□□ -1.95
PEP8YJL053W RIT1P23796 513 aa2.85□□□□□ -1.95
PEP8YJL053W MCM3P24279 971 aaKnown RBP2.85□□□□□ -1.95
PEP8YJL053W PWP2P25635 923 aaKnown RBP2.85□□□□□ -1.95
PEP8YJL053W FRD1P32614 470 aaKnown RBP2.85□□□□□ -1.95
PEP8YJL053W ESF2P53743 316 aaKnown RBP2.85□□□□□ -1.95
PEP8YJL053W YNL058CP53947 316 aa2.85□□□□□ -1.95
PEP8YJL053W MOT3P54785 490 aaKnown RBP2.85□□□□□ -1.95
PEP8YJL053W SNU56Q03782 492 aaKnown RBP2.85□□□□□ -1.95
PEP8YJL053W ATG16Q03818 150 aa2.85□□□□□ -1.95
PEP8YJL053W YMR034CQ05131 434 aaPredicted RBP2.85□□□□□ -1.95
PEP8YJL053W BLS1Q06071 122 aa2.85□□□□□ -1.95
PEP8YJL053W AIM6Q07716 390 aa2.85□□□□□ -1.95
PEP8YJL053W SIP1P32578 815 aa2.84□□□□□ -1.95
PEP8YJL053W VPS24P36095 224 aaKnown RBP2.84□□□□□ -1.95
PEP8YJL053W FSH1P38777 243 aaKnown RBP2.84□□□□□ -1.95
PEP8YJL053W SPC72P39723 622 aa2.84□□□□□ -1.95
PEP8YJL053W ARB1P40024 610 aaKnown RBP2.84□□□□□ -1.95
PEP8YJL053W SAP185P40856 1058 aa2.84□□□□□ -1.95
PEP8YJL053W IMA1P53051 589 aa2.84□□□□□ -1.95
PEP8YJL053W PSR2Q07949 397 aa2.84□□□□□ -1.95
PEP8YJL053W PCL8Q08966 492 aa2.84□□□□□ -1.95
PEP8YJL053W CHO2P05374 869 aaKnown RBP2.83□□□□□ -1.96
PEP8YJL053W ADE3P07245 946 aaKnown RBP2.83□□□□□ -1.96
PEP8YJL053W PET122P10355 254 aa2.83□□□□□ -1.96
PEP8YJL053W KGD2P19262 463 aaPredicted RBP2.83□□□□□ -1.96
PEP8YJL053W CLB4P24871 460 aa2.83□□□□□ -1.96
PEP8YJL053W RAD16P31244 790 aa2.83□□□□□ -1.96
PEP8YJL053W GDA1P32621 518 aa2.83□□□□□ -1.96
PEP8YJL053W RPF2P36160 344 aaKnown RBP2.83□□□□□ -1.96
PEP8YJL053W DHH1P39517 506 aaKnown RBP2.83□□□□□ -1.96
PEP8YJL053W CIR1P42940 261 aa2.83□□□□□ -1.96
PEP8YJL053W YNL092WP53934 400 aa2.83□□□□□ -1.96
PEP8YJL053W TRS130Q03660 1102 aa2.83□□□□□ -1.96
PEP8YJL053W SMA2Q04658 369 aa2.83□□□□□ -1.96
PEP8YJL053W CYK3Q07533 885 aa2.83□□□□□ -1.96
PEP8YJL053W YBR255C-AQ3E776 120 aa2.83□□□□□ -1.96
PEP8YJL053W PNO1Q99216 274 aaKnown RBP2.83□□□□□ -1.96
PEP8YJL053W ILS1P09436 1072 aaKnown RBP2.82□□□□□ -1.96
PEP8YJL053W PPZ1P26570 692 aa2.82□□□□□ -1.96
PEP8YJL053W NUP120P35729 1037 aa2.82□□□□□ -1.96
PEP8YJL053W NPR3P38742 1146 aa2.82□□□□□ -1.96
PEP8YJL053W FUN12P39730 1002 aaKnown RBP2.82□□□□□ -1.96
PEP8YJL053W PUG1P40100 303 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms