RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C HOS1Q12214 470 aa2.13□□□□□ -2.07
RTT101YJL047C VCX1Q99385 411 aa2.13□□□□□ -2.07
RTT101YJL047C CTT1P06115 562 aa2.12□□□□□ -2.07
RTT101YJL047C HMG2P12684 1045 aa2.12□□□□□ -2.07
RTT101YJL047C CPR2P23285 205 aa2.12□□□□□ -2.07
RTT101YJL047C MRPL25P23369 157 aa2.12□□□□□ -2.07
RTT101YJL047C MET22P32179 357 aa2.12□□□□□ -2.07
RTT101YJL047C TYE7P33122 291 aaPredicted RBP2.12□□□□□ -2.07
RTT101YJL047C UBP11P36026 717 aa2.12□□□□□ -2.07
RTT101YJL047C REG2P38232 338 aa2.12□□□□□ -2.07
RTT101YJL047C KSP1P38691 1029 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C STB5P38699 743 aa2.12□□□□□ -2.07
RTT101YJL047C VPS45P38932 577 aa2.12□□□□□ -2.07
RTT101YJL047C ARB1P40024 610 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C RRT14P40470 206 aa2.12□□□□□ -2.07
RTT101YJL047C PKP1P40530 394 aa2.12□□□□□ -2.07
RTT101YJL047C IST3P40565 148 aaPredicted RBP2.12□□□□□ -2.07
RTT101YJL047C ROK1P45818 564 aaPredicted RBP2.12□□□□□ -2.07
RTT101YJL047C ZAP1P47043 880 aa2.12□□□□□ -2.07
RTT101YJL047C KEL2P50090 882 aa2.12□□□□□ -2.07
RTT101YJL047C VPS4P52917 437 aa2.12□□□□□ -2.07
RTT101YJL047C PUS2P53167 370 aa2.12□□□□□ -2.07
RTT101YJL047C TNA1P53322 534 aa2.12□□□□□ -2.07
RTT101YJL047C TRS31Q03337 283 aa2.12□□□□□ -2.07
RTT101YJL047C EFR3Q03653 782 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C ADY4Q05955 493 aa2.12□□□□□ -2.07
RTT101YJL047C LUC7Q07508 261 aaPredicted RBP2.12□□□□□ -2.07
RTT101YJL047C RRT8Q08219 342 aa2.12□□□□□ -2.07
RTT101YJL047C HRK1Q08732 759 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C BUD7Q08754 746 aa2.12□□□□□ -2.07
RTT101YJL047C RIM20Q12033 661 aa2.12□□□□□ -2.07
RTT101YJL047C UPC2Q12151 913 aa2.12□□□□□ -2.07
RTT101YJL047C NBP2Q12163 236 aa2.12□□□□□ -2.07
RTT101YJL047C TPK2P06245 380 aa2.12□□□□□ -2.07
RTT101YJL047C YML002WP0CF17 737 aa2.12□□□□□ -2.07
RTT101YJL047C RPL1AP0CX43 217 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C RPL1BP0CX44 217 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C HOM2P13663 365 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C FRS1P15624 595 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C DIT1P21623 536 aa2.12□□□□□ -2.07
RTT101YJL047C PHO84P25297 587 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C DMC1P25453 334 aa2.12□□□□□ -2.07
RTT101YJL047C YPT7P32939 208 aa2.12□□□□□ -2.07
RTT101YJL047C COY1P34237 679 aa2.12□□□□□ -2.07
RTT101YJL047C WHI3P34761 661 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C KTR3P38130 404 aaPredicted RBP2.12□□□□□ -2.07
RTT101YJL047C CDS1P38221 457 aa2.12□□□□□ -2.07
RTT101YJL047C RRT2P38332 387 aa2.12□□□□□ -2.07
RTT101YJL047C CCT6P39079 546 aa2.12□□□□□ -2.07
RTT101YJL047C GID8P40208 455 aa2.12□□□□□ -2.07
RTT101YJL047C YIL108WP40483 696 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C MAF1P41910 395 aa2.12□□□□□ -2.07
RTT101YJL047C LEM3P42838 414 aa2.12□□□□□ -2.07
RTT101YJL047C TAH11P47112 604 aa2.12□□□□□ -2.07
RTT101YJL047C AAD10P47182 288 aa2.12□□□□□ -2.07
RTT101YJL047C TEL2P53038 688 aa2.12□□□□□ -2.07
RTT101YJL047C RAI1P53063 387 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C YBP2P53169 641 aa2.12□□□□□ -2.07
RTT101YJL047C LSB1P53281 241 aa2.12□□□□□ -2.07
RTT101YJL047C SQS1P53866 767 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C MUB1Q03162 620 aa2.12□□□□□ -2.07
RTT101YJL047C CWC21Q03375 135 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C DOT1Q04089 582 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C MRD1Q06106 887 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C SMD2Q06217 110 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C MCP2Q06567 569 aa2.12□□□□□ -2.07
RTT101YJL047C OPT2Q06593 877 aa2.12□□□□□ -2.07
RTT101YJL047C CLP1Q08685 445 aaPredicted RBP2.12□□□□□ -2.07
RTT101YJL047C TMA16Q08687 178 aa2.12□□□□□ -2.07
RTT101YJL047C RTC5Q12108 567 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C LEU9Q12166 604 aaKnown RBP2.12□□□□□ -2.07
RTT101YJL047C TY1A-BLQ12266 440 aa2.12□□□□□ -2.07
RTT101YJL047C CTF3Q12748 733 aa2.12□□□□□ -2.07
RTT101YJL047C ATP2P00830 511 aaKnown RBP2.11□□□□□ -2.07
RTT101YJL047C ADE2P21264 571 aaKnown RBP2.11□□□□□ -2.07
RTT101YJL047C PRE4P30657 266 aa2.11□□□□□ -2.07
RTT101YJL047C RPT5P33297 434 aaKnown RBP2.11□□□□□ -2.07
RTT101YJL047C GPT2P36148 743 aa2.11□□□□□ -2.07
RTT101YJL047C DAD2P36162 133 aa2.11□□□□□ -2.07
RTT101YJL047C MRPL40P36534 297 aa2.11□□□□□ -2.07
RTT101YJL047C CST26P38226 397 aa2.11□□□□□ -2.07
RTT101YJL047C OTU2P38747 307 aaKnown RBP2.11□□□□□ -2.07
RTT101YJL047C EPL1P43572 832 aa2.11□□□□□ -2.07
RTT101YJL047C SSY5P47002 699 aa2.11□□□□□ -2.07
RTT101YJL047C CUE3P53137 624 aaKnown RBP2.11□□□□□ -2.07
RTT101YJL047C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
RTT101YJL047C TPP1Q03796 238 aa2.11□□□□□ -2.07
RTT101YJL047C MGR3Q04472 501 aa2.11□□□□□ -2.07
RTT101YJL047C ECM18Q04623 453 aa2.11□□□□□ -2.07
RTT101YJL047C THI22Q06490 572 aa2.11□□□□□ -2.07
RTT101YJL047C TY3A-GQ12173 290 aa2.11□□□□□ -2.07
RTT101YJL047C OSW2Q12202 724 aa2.11□□□□□ -2.07
RTT101YJL047C HER1Q12276 1246 aa2.11□□□□□ -2.07
RTT101YJL047C YJR112W-AQ3E743 109 aa2.11□□□□□ -2.07
RTT101YJL047C TY3A-IQ99219 290 aa2.11□□□□□ -2.07
RTT101YJL047C YPT6Q99260 215 aa2.11□□□□□ -2.07
RTT101YJL047C PET122P10355 254 aa2.11□□□□□ -2.07
RTT101YJL047C PYC1P11154 1178 aaKnown RBP2.11□□□□□ -2.07
RTT101YJL047C MER1P16523 270 aa2.11□□□□□ -2.07
RTT101YJL047C SNT1P25357 1226 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms