RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C PUS6P53294 404 aa3.63□□□□□ -1.83
SSM4YIL030C COX20Q04935 205 aa3.63□□□□□ -1.83
SSM4YIL030C YDL073WQ07454 984 aa3.63□□□□□ -1.83
SSM4YIL030C YMR030W-AQ3E760 96 aa3.63□□□□□ -1.83
SSM4YIL030C YPR096CO13587 100 aa3.62□□□□□ -1.83
SSM4YIL030C REP1P03871 373 aa3.62□□□□□ -1.83
SSM4YIL030C PER1P25625 357 aa3.62□□□□□ -1.83
SSM4YIL030C RPT2P40327 437 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C COA1P40452 197 aa3.62□□□□□ -1.83
SSM4YIL030C YIL055CP40523 627 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C YJL218WP40892 196 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C DAN4P47179 1161 aa3.62□□□□□ -1.83
SSM4YIL030C ISM1P48526 1002 aa3.62□□□□□ -1.83
SSM4YIL030C CDC55Q00362 526 aa3.62□□□□□ -1.83
SSM4YIL030C SPO71Q03868 1245 aa3.62□□□□□ -1.83
SSM4YIL030C AIM33Q04516 312 aa3.62□□□□□ -1.83
SSM4YIL030C SYO1Q07395 620 aa3.62□□□□□ -1.83
SSM4YIL030C RHO2P06781 192 aa3.62□□□□□ -1.83
SSM4YIL030C FBP1P09201 348 aa3.62□□□□□ -1.83
SSM4YIL030C YER152CP10356 443 aa3.62□□□□□ -1.83
SSM4YIL030C PTC6P25646 442 aa3.62□□□□□ -1.83
SSM4YIL030C CYS3P31373 394 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C TOM20P35180 183 aa3.62□□□□□ -1.83
SSM4YIL030C MAE1P36013 669 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C STV1P37296 890 aa3.62□□□□□ -1.83
SSM4YIL030C ECM13P38195 257 aa3.62□□□□□ -1.83
SSM4YIL030C AVT6P40074 448 aa3.62□□□□□ -1.83
SSM4YIL030C SCC4P40090 624 aa3.62□□□□□ -1.83
SSM4YIL030C PEP8P40335 379 aa3.62□□□□□ -1.83
SSM4YIL030C YJL049WP47048 450 aa3.62□□□□□ -1.83
SSM4YIL030C GPD1Q00055 391 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C KRE28Q04431 385 aa3.62□□□□□ -1.83
SSM4YIL030C HSP31Q04432 237 aa3.62□□□□□ -1.83
SSM4YIL030C CDC123Q05791 360 aa3.62□□□□□ -1.83
SSM4YIL030C UBX5Q06682 500 aa3.62□□□□□ -1.83
SSM4YIL030C APC5Q08683 685 aa3.62□□□□□ -1.83
SSM4YIL030C MLH3Q12083 715 aa3.62□□□□□ -1.83
SSM4YIL030C ATG34Q12292 412 aa3.62□□□□□ -1.83
SSM4YIL030C CBP2P03874 630 aaPredicted RBP3.62□□□□□ -1.83
SSM4YIL030C CDC33P07260 213 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C GPA2P10823 449 aa3.62□□□□□ -1.83
SSM4YIL030C CDC24P11433 854 aaPredicted RBP3.62□□□□□ -1.83
SSM4YIL030C BUD31P25337 157 aaPredicted RBP3.62□□□□□ -1.83
SSM4YIL030C SNT1P25357 1226 aa3.62□□□□□ -1.83
SSM4YIL030C CBF5P33322 483 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SSM4YIL030C JNM1P36224 373 aa3.62□□□□□ -1.83
SSM4YIL030C PBP2P38151 413 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SSM4YIL030C SSP1P38871 571 aa3.62□□□□□ -1.83
SSM4YIL030C HOC1P47124 396 aa3.62□□□□□ -1.83
SSM4YIL030C STR3P53101 465 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C RBG2P53295 368 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C COP1P53622 1201 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C CPR6P53691 371 aaKnown RBP3.62□□□□□ -1.83
SSM4YIL030C FAR10Q06001 478 aa3.62□□□□□ -1.83
SSM4YIL030C YLR053CQ12026 108 aa3.62□□□□□ -1.83
SSM4YIL030C CSR2Q12734 1121 aa3.62□□□□□ -1.83
SSM4YIL030C TUF1P02992 437 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C HMG1P12683 1054 aa3.61□□□□□ -1.83
SSM4YIL030C VPS3P23643 1011 aa3.61□□□□□ -1.83
SSM4YIL030C CTR86P25355 563 aa3.61□□□□□ -1.83
SSM4YIL030C GPI10P30777 616 aa3.61□□□□□ -1.83
SSM4YIL030C PHA2P32452 334 aa3.61□□□□□ -1.83
SSM4YIL030C PDX3P38075 228 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C LYS9P38999 446 aa3.61□□□□□ -1.83
SSM4YIL030C YJR061WP40355 935 aa3.61□□□□□ -1.83
SSM4YIL030C YIR007WP40566 764 aa3.61□□□□□ -1.83
SSM4YIL030C KXD1P53158 218 aa3.61□□□□□ -1.83
SSM4YIL030C MNP1P53163 194 aaPredicted RBP3.61□□□□□ -1.83
SSM4YIL030C ADY3Q07732 790 aa3.61□□□□□ -1.83
SSM4YIL030C NGL1Q08213 363 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C GYP1Q08484 637 aa3.61□□□□□ -1.83
SSM4YIL030C JLP1Q12358 412 aa3.61□□□□□ -1.83
SSM4YIL030C LSO1Q3E827 93 aa3.61□□□□□ -1.83
SSM4YIL030C TUB2P02557 457 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C PMA2P19657 947 aa3.61□□□□□ -1.83
SSM4YIL030C SAT4P25333 603 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C TIM23P32897 222 aa3.61□□□□□ -1.83
SSM4YIL030C YHI9P38765 294 aa3.61□□□□□ -1.83
SSM4YIL030C RTT101P47050 842 aa3.61□□□□□ -1.83
SSM4YIL030C MCM6P53091 1017 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C GET1P53192 235 aa3.61□□□□□ -1.83
SSM4YIL030C TEP1P53916 434 aa3.61□□□□□ -1.83
SSM4YIL030C COG6P53959 839 aa3.61□□□□□ -1.83
SSM4YIL030C SDH1Q00711 640 aa3.61□□□□□ -1.83
SSM4YIL030C MMT1Q03218 510 aa3.61□□□□□ -1.83
SSM4YIL030C YDR124WQ04608 324 aa3.61□□□□□ -1.83
SSM4YIL030C NSL1Q12143 216 aa3.61□□□□□ -1.83
SSM4YIL030C YOL107WQ12239 342 aa3.61□□□□□ -1.83
SSM4YIL030C MED11Q99278 115 aa3.61□□□□□ -1.83
SSM4YIL030C HTA2P04912 132 aa3.61□□□□□ -1.83
SSM4YIL030C EMC1P25574 760 aa3.61□□□□□ -1.83
SSM4YIL030C ISF1P32488 338 aa3.61□□□□□ -1.83
SSM4YIL030C KDX1P36005 433 aa3.61□□□□□ -1.83
SSM4YIL030C MCR1P36060 302 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C MRX3P38172 270 aa3.61□□□□□ -1.83
SSM4YIL030C PCM1P38628 557 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C IPT1P38954 527 aa3.61□□□□□ -1.83
SSM4YIL030C IMA5P40884 581 aa3.61□□□□□ -1.83
SSM4YIL030C ROK1P45818 564 aaPredicted RBP3.61□□□□□ -1.83
SSM4YIL030C YGL176CP46945 554 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms