RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W VPS62P53285 467 aa7.62□□□□□ -1.19
PEX28YHR150W DUS1P53759 423 aaKnown RBP7.62□□□□□ -1.19
PEX28YHR150W YNL115CP53925 644 aa7.62□□□□□ -1.19
PEX28YHR150W ATG26Q06321 1198 aa7.62□□□□□ -1.19
PEX28YHR150W RCL1Q08096 367 aaPredicted RBP7.62□□□□□ -1.19
PEX28YHR150W PEX15Q08215 383 aa7.62□□□□□ -1.19
PEX28YHR150W CIR2Q08822 631 aa7.62□□□□□ -1.19
PEX28YHR150W HRT3Q12347 344 aa7.62□□□□□ -1.19
PEX28YHR150W YMR030W-AQ3E760 96 aa7.62□□□□□ -1.19
PEX28YHR150W UBR2Q07963 1872 aa7.61□□□□□ -1.19
PEX28YHR150W PAB1P04147 577 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
PEX28YHR150W GAL80P04387 435 aa7.61□□□□□ -1.19
PEX28YHR150W TYR1P20049 452 aa7.61□□□□□ -1.19
PEX28YHR150W MSB1P21339 1137 aaKnown RBP7.61□□□□□ -1.19
PEX28YHR150W VPH2P32341 215 aa7.61□□□□□ -1.19
PEX28YHR150W AIM26P32858 118 aa7.61□□□□□ -1.19
PEX28YHR150W OTU2P38747 307 aaKnown RBP7.61□□□□□ -1.19
PEX28YHR150W XDJ1P39102 459 aa7.61□□□□□ -1.19
PEX28YHR150W CCT8P47079 568 aaKnown RBP7.61□□□□□ -1.19
PEX28YHR150W TEL2P53038 688 aa7.61□□□□□ -1.19
PEX28YHR150W SLG1P54867 378 aa7.61□□□□□ -1.19
PEX28YHR150W PRO2P54885 456 aaKnown RBP7.61□□□□□ -1.19
PEX28YHR150W NRT1Q08485 598 aa7.61□□□□□ -1.19
PEX28YHR150W PKH2Q12236 1081 aaKnown RBP7.61□□□□□ -1.19
PEX28YHR150W YDR524C-BQ3E6R4 66 aa7.61□□□□□ -1.19
PEX28YHR150W ATP2P00830 511 aaKnown RBP7.61□□□□□ -1.19
PEX28YHR150W ZIP1P31111 875 aa7.61□□□□□ -1.19
PEX28YHR150W PEX5P35056 612 aa7.61□□□□□ -1.19
PEX28YHR150W EAP1P36041 632 aaKnown RBP7.61□□□□□ -1.19
PEX28YHR150W PIK1P39104 1066 aa7.61□□□□□ -1.19
PEX28YHR150W TGL3P40308 642 aa7.61□□□□□ -1.19
PEX28YHR150W HPM1P40481 377 aa7.61□□□□□ -1.19
PEX28YHR150W IML2P47031 731 aa7.61□□□□□ -1.19
PEX28YHR150W DAN4P47179 1161 aa7.61□□□□□ -1.19
PEX28YHR150W YTP1P53584 459 aa7.61□□□□□ -1.19
PEX28YHR150W AAD4Q07747 329 aa7.61□□□□□ -1.19
PEX28YHR150W GPM2Q12008 311 aa7.61□□□□□ -1.19
PEX28YHR150W LDB17Q12342 491 aa7.61□□□□□ -1.19
PEX28YHR150W GCY1P14065 312 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
PEX28YHR150W RGR1P19263 1082 aa7.6□□□□□ -1.19
PEX28YHR150W PMI40P29952 429 aaKnown RBP7.6□□□□□ -1.19
PEX28YHR150W CCR4P31384 837 aaKnown RBP7.6□□□□□ -1.19
PEX28YHR150W TFC1P32367 649 aa7.6□□□□□ -1.19
PEX28YHR150W PUP2P32379 260 aa7.6□□□□□ -1.19
PEX28YHR150W GDA1P32621 518 aa7.6□□□□□ -1.19
PEX28YHR150W LDH1P38139 375 aa7.6□□□□□ -1.19
PEX28YHR150W ATG12P38316 186 aa7.6□□□□□ -1.19
PEX28YHR150W BIT2P38346 545 aa7.6□□□□□ -1.19
PEX28YHR150W PPE1P38796 400 aa7.6□□□□□ -1.19
PEX28YHR150W BZZ1P38822 633 aa7.6□□□□□ -1.19
PEX28YHR150W LAM1P38851 1228 aa7.6□□□□□ -1.19
PEX28YHR150W YAT2P40017 923 aa7.6□□□□□ -1.19
PEX28YHR150W MPH1P40562 993 aa7.6□□□□□ -1.19
PEX28YHR150W CDC1P40986 491 aa7.6□□□□□ -1.19
PEX28YHR150W MNN11P46985 422 aaKnown RBP7.6□□□□□ -1.19
PEX28YHR150W ASN2P49090 572 aaKnown RBP7.6□□□□□ -1.19
PEX28YHR150W BUD32P53323 261 aa7.6□□□□□ -1.19
PEX28YHR150W DCP2P53550 970 aaKnown RBP7.6□□□□□ -1.19
PEX28YHR150W ASI2P53895 289 aa7.6□□□□□ -1.19
PEX28YHR150W REX2P54964 269 aaKnown RBP7.6□□□□□ -1.19
PEX28YHR150W CSN9Q03981 162 aa7.6□□□□□ -1.19
PEX28YHR150W CDC123Q05791 360 aa7.6□□□□□ -1.19
PEX28YHR150W YPR097WQ06839 1073 aa7.6□□□□□ -1.19
PEX28YHR150W APC5Q08683 685 aa7.6□□□□□ -1.19
PEX28YHR150W MCH5Q08777 521 aa7.6□□□□□ -1.19
PEX28YHR150W YIG1Q08956 461 aa7.6□□□□□ -1.19
PEX28YHR150W NBP2Q12163 236 aa7.6□□□□□ -1.19
PEX28YHR150W DBP10Q12389 995 aaKnown RBP7.6□□□□□ -1.19
PEX28YHR150W EFG1Q3E705 233 aaKnown RBP7.6□□□□□ -1.19
PEX28YHR150W CAR1P00812 333 aaKnown RBP7.59□□□□□ -1.19
PEX28YHR150W TPK1P06244 397 aa7.59□□□□□ -1.19
PEX28YHR150W RHO2P06781 192 aa7.59□□□□□ -1.19
PEX28YHR150W SBP1P10080 294 aaKnown RBP7.59□□□□□ -1.19
PEX28YHR150W SPT16P32558 1035 aaKnown RBP7.59□□□□□ -1.19
PEX28YHR150W TKL2P33315 681 aa7.59□□□□□ -1.19
PEX28YHR150W YBR053CP38235 358 aa7.59□□□□□ -1.19
PEX28YHR150W NPT1P39683 429 aaKnown RBP7.59□□□□□ -1.19
PEX28YHR150W ATM1P40416 690 aa7.59□□□□□ -1.19
PEX28YHR150W NOP9P47077 666 aaKnown RBP7.59□□□□□ -1.19
PEX28YHR150W VMA10P48836 114 aaKnown RBP7.59□□□□□ -1.19
PEX28YHR150W PEX31P53203 462 aa7.59□□□□□ -1.19
PEX28YHR150W PXR1P53335 271 aaPredicted RBP7.59□□□□□ -1.19
PEX28YHR150W YNL011CP53980 444 aa7.59□□□□□ -1.19
PEX28YHR150W KTR6P54070 446 aa7.59□□□□□ -1.19
PEX28YHR150W VPS9P54787 451 aa7.59□□□□□ -1.19
PEX28YHR150W SPC2Q04969 178 aa7.59□□□□□ -1.19
PEX28YHR150W ATG17Q06410 417 aa7.59□□□□□ -1.19
PEX28YHR150W SAM3Q08986 587 aa7.59□□□□□ -1.19
PEX28YHR150W HOS1Q12214 470 aa7.59□□□□□ -1.19
PEX28YHR150W ARP7Q12406 477 aa7.59□□□□□ -1.19
PEX28YHR150W STE2D6VTK4 431 aa7.58□□□□□ -1.2
PEX28YHR150W ERG20P08524 352 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W HEM1P09950 548 aaPredicted RBP7.58□□□□□ -1.2
PEX28YHR150W HSC82P15108 705 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W KGD2P19262 463 aaPredicted RBP7.58□□□□□ -1.2
PEX28YHR150W POT1P27796 417 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
PEX28YHR150W HEM12P32347 362 aaPredicted RBP7.58□□□□□ -1.2
PEX28YHR150W DAL1P32375 460 aa7.58□□□□□ -1.2
PEX28YHR150W GCD11P32481 527 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W ASK1P35734 292 aa7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 91.6 ms