RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM27, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM27	YGR215W	SWC3	P31376	625 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	TMT1	P32643	299 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	ECM32	P32644	1121 aa	Known RBP	4.22	□□□□□ -1.73
RSM27	YGR215W	ERV46	P39727	415 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	FUN12	P39730	1002 aa	Known RBP	4.22	□□□□□ -1.73
RSM27	YGR215W	UBX6	P47049	396 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	CPR6	P53691	371 aa	Known RBP	4.22	□□□□□ -1.73
RSM27	YGR215W	YAT1	P80235	687 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	SEC5	P89102	971 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	YPL191C	Q08930	360 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	PFA4	Q12006	378 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	LYS21	Q12122	440 aa	Known RBP	4.22	□□□□□ -1.73
RSM27	YGR215W	SUL2	Q12325	893 aa		4.22	□□□□□ -1.73
RSM27	YGR215W	MIS1	P09440	975 aa	Known RBP	4.21	□□□□□ -1.74
RSM27	YGR215W	PET122	P10355	254 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	APA1	P16550	321 aa	Known RBP	4.21	□□□□□ -1.74
RSM27	YGR215W	PHO81	P17442	1178 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	COQ3	P27680	312 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	YBR138C	P38277	524 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	FLO5	P38894	1075 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	RAD26	P40352	1085 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	YIL024C	P40543	189 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	SKP2	P42843	763 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	YNL058C	P53947	316 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	EIS1	Q05050	843 aa	Known RBP	4.21	□□□□□ -1.74
RSM27	YGR215W	RRP6	Q12149	733 aa	Known RBP	4.21	□□□□□ -1.74
RSM27	YGR215W	RVB2	Q12464	471 aa	Known RBP	4.21	□□□□□ -1.74
RSM27	YGR215W	YBR255C-A	Q3E776	120 aa		4.21	□□□□□ -1.74
RSM27	YGR215W	CET1	O13297	549 aa	Predicted RBP	4.2	□□□□□ -1.74
RSM27	YGR215W	CLB4	P24871	460 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	PTC6	P25646	442 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	URK1	P27515	501 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	LAC1	P28496	418 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	GSH1	P32477	678 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	GCD7	P32502	381 aa	Predicted RBP	4.2	□□□□□ -1.74
RSM27	YGR215W	PUG1	P40100	303 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	UBP7	P40453	1071 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	ZAP1	P47043	880 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	YDR109C	Q04585	715 aa		4.2	□□□□□ -1.74
RSM27	YGR215W	JHD1	P40034	492 aa		4.19	□□□□□ -1.74
RSM27	YGR215W	NOP2	P40991	618 aa	Known RBP	4.19	□□□□□ -1.74
RSM27	YGR215W	COP1	P53622	1201 aa	Known RBP	4.19	□□□□□ -1.74
RSM27	YGR215W	GEP3	Q08622	556 aa		4.19	□□□□□ -1.74
RSM27	YGR215W	GAL4	P04386	881 aa		4.18	□□□□□ -1.74
RSM27	YGR215W	RPT2	P40327	437 aa	Known RBP	4.18	□□□□□ -1.74
RSM27	YGR215W	MNT3	P40549	630 aa		4.18	□□□□□ -1.74
RSM27	YGR215W	IOC4	Q04213	475 aa		4.18	□□□□□ -1.74
RSM27	YGR215W	LEA1	Q08963	238 aa	Predicted RBP	4.18	□□□□□ -1.74
RSM27	YGR215W	HER1	Q12276	1246 aa		4.18	□□□□□ -1.74
RSM27	YGR215W	RFA2	P26754	273 aa	Known RBP	4.17	□□□□□ -1.74
RSM27	YGR215W	ERR3	P42222	437 aa		4.17	□□□□□ -1.74
RSM27	YGR215W	IMA1	P53051	589 aa		4.17	□□□□□ -1.74
RSM27	YGR215W	YPR003C	P53394	754 aa		4.17	□□□□□ -1.74
RSM27	YGR215W	MPS1	P54199	764 aa		4.17	□□□□□ -1.74
RSM27	YGR215W	MTG1	Q03151	367 aa	Predicted RBP	4.17	□□□□□ -1.74
RSM27	YGR215W	TRS130	Q03660	1102 aa		4.17	□□□□□ -1.74
RSM27	YGR215W	THI3	Q07471	609 aa		4.17	□□□□□ -1.74
RSM27	YGR215W	NCP1	P16603	691 aa	Known RBP	4.16	□□□□□ -1.74
RSM27	YGR215W	MSS51	P32335	436 aa		4.16	□□□□□ -1.74
RSM27	YGR215W	RPT3	P33298	428 aa	Known RBP	4.16	□□□□□ -1.74
RSM27	YGR215W	HES1	P35843	434 aa		4.16	□□□□□ -1.74
RSM27	YGR215W	FSH1	P38777	243 aa	Known RBP	4.16	□□□□□ -1.74
RSM27	YGR215W	ACA1	P39970	489 aa		4.16	□□□□□ -1.74
RSM27	YGR215W	PSF2	P40359	213 aa		4.16	□□□□□ -1.74
RSM27	YGR215W	FAF1	P40546	346 aa	Predicted RBP	4.16	□□□□□ -1.74
RSM27	YGR215W	ORC5	P50874	479 aa		4.16	□□□□□ -1.74
RSM27	YGR215W	UBX4	P54730	416 aa		4.16	□□□□□ -1.74
RSM27	YGR215W	PGI1	P12709	554 aa	Known RBP	4.15	□□□□□ -1.75
RSM27	YGR215W	SCO2	P38072	301 aa		4.15	□□□□□ -1.75
RSM27	YGR215W	YMR124W	P39523	943 aa	Known RBP	4.15	□□□□□ -1.75
RSM27	YGR215W	SCW4	P53334	386 aa	Known RBP	4.15	□□□□□ -1.75
RSM27	YGR215W	ADE16	P54113	591 aa	Known RBP	4.15	□□□□□ -1.75
RSM27	YGR215W	GTB1	Q04924	702 aa		4.15	□□□□□ -1.75
RSM27	YGR215W	GET3	Q12154	354 aa	Known RBP	4.15	□□□□□ -1.75
RSM27	YGR215W	YPR089W	O13585	888 aa		4.14	□□□□□ -1.75
RSM27	YGR215W	BUD16	P39988	312 aa		4.14	□□□□□ -1.75
RSM27	YGR215W	CFD1	P40558	293 aa		4.14	□□□□□ -1.75
RSM27	YGR215W	ARC35	P53731	342 aa	Known RBP	4.14	□□□□□ -1.75
RSM27	YGR215W	ECM22	Q05958	814 aa	Predicted RBP	4.14	□□□□□ -1.75
RSM27	YGR215W	RRI1	Q12468	440 aa		4.14	□□□□□ -1.75
RSM27	YGR215W	ATP2	P00830	511 aa	Known RBP	4.13	□□□□□ -1.75
RSM27	YGR215W	NUC1	P08466	329 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	SUI3	P09064	285 aa	Known RBP	4.13	□□□□□ -1.75
RSM27	YGR215W	YER190C-B	P0CX94	160 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	YEL077W-A	P0CX95	160 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	YGR296C-B	P0CX96	160 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	YPL283W-B	P0CX97	160 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	YPR204C-A	P0CX98	160 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	BIK1	P11709	440 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	MSM1	P22438	575 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	PCI8	P40512	444 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	PAP2	P53632	584 aa	Known RBP	4.13	□□□□□ -1.75
RSM27	YGR215W	YNL144C	P53907	740 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	CIA1	Q05583	330 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	COX17	Q12287	69 aa		4.13	□□□□□ -1.75
RSM27	YGR215W	YML003W	P0CF16	290 aa		4.12	□□□□□ -1.75
RSM27	YGR215W	DBF20	P32328	564 aa		4.12	□□□□□ -1.75
RSM27	YGR215W	YJL107C	P42947	387 aa		4.12	□□□□□ -1.75
RSM27	YGR215W	MSY1	P48527	492 aa		4.12	□□□□□ -1.75
RSM27	YGR215W	YRB30	P53107	440 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms