RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W KTR3P38130 404 aaPredicted RBP2.4□□□□□ -2.03
SMD1YGR074W YJR061WP40355 935 aa2.4□□□□□ -2.03
SMD1YGR074W OPT1P40897 799 aa2.4□□□□□ -2.03
SMD1YGR074W MEP3P53390 489 aa2.4□□□□□ -2.03
SMD1YGR074W YNL058CP53947 316 aa2.4□□□□□ -2.03
SMD1YGR074W USA1Q03714 838 aa2.4□□□□□ -2.03
SMD1YGR074W ATG23Q06671 453 aa2.4□□□□□ -2.03
SMD1YGR074W TRM8Q12009 286 aa2.4□□□□□ -2.03
SMD1YGR074W SWT1Q12104 458 aa2.4□□□□□ -2.03
SMD1YGR074W LYS21Q12122 440 aaKnown RBP2.4□□□□□ -2.03
SMD1YGR074W HUA2Q12134 243 aa2.4□□□□□ -2.03
SMD1YGR074W SUL2Q12325 893 aa2.4□□□□□ -2.03
SMD1YGR074W YBR255C-AQ3E776 120 aa2.4□□□□□ -2.03
SMD1YGR074W YOR111WQ99210 232 aa2.4□□□□□ -2.03
SMD1YGR074W YOL087CQ99247 1116 aa2.4□□□□□ -2.03
SMD1YGR074W TPK2P06245 380 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-LR1P0C2J4 438 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-FP0CX61 438 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-GR2P0CX62 438 aa2.39□□□□□ -2.03
SMD1YGR074W STE12P13574 688 aa2.39□□□□□ -2.03
SMD1YGR074W HSC82P15108 705 aaKnown RBP2.39□□□□□ -2.03
SMD1YGR074W STE4P18851 423 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-CP25383 438 aa2.39□□□□□ -2.03
SMD1YGR074W ORC2P32833 620 aa2.39□□□□□ -2.03
SMD1YGR074W TFC3P34111 1160 aa2.39□□□□□ -2.03
SMD1YGR074W NOP4P37838 685 aaKnown RBP2.39□□□□□ -2.03
SMD1YGR074W YBL029WP38201 376 aa2.39□□□□□ -2.03
SMD1YGR074W AXL2P38928 823 aa2.39□□□□□ -2.03
SMD1YGR074W YEL068CP39977 110 aa2.39□□□□□ -2.03
SMD1YGR074W PFK26P40433 827 aaKnown RBP2.39□□□□□ -2.03
SMD1YGR074W DJP1P40564 432 aa2.39□□□□□ -2.03
SMD1YGR074W PSP1P50896 841 aaKnown RBP2.39□□□□□ -2.03
SMD1YGR074W SCS3P53012 380 aa2.39□□□□□ -2.03
SMD1YGR074W COQ6P53318 479 aa2.39□□□□□ -2.03
SMD1YGR074W SNF12P53628 566 aa2.39□□□□□ -2.03
SMD1YGR074W FCP1Q03254 732 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-DR2Q03483 438 aa2.39□□□□□ -2.03
SMD1YGR074W WAR1Q03631 944 aa2.39□□□□□ -2.03
SMD1YGR074W TMA16Q08687 178 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-BQ12260 438 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-OR2Q12293 438 aa2.39□□□□□ -2.03
SMD1YGR074W RRI2Q12348 645 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-DR1Q12392 438 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-OR1Q12439 438 aa2.39□□□□□ -2.03
SMD1YGR074W TY2A-DR3Q99303 438 aa2.39□□□□□ -2.03
SMD1YGR074W YMR084WA2P2R3 262 aa2.38□□□□□ -2.03
SMD1YGR074W CPA2P03965 1118 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W CDC24P11433 854 aaPredicted RBP2.38□□□□□ -2.03
SMD1YGR074W KGD2P19262 463 aaPredicted RBP2.38□□□□□ -2.03
SMD1YGR074W RNR3P21672 869 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W URK1P27515 501 aa2.38□□□□□ -2.03
SMD1YGR074W MUD2P36084 527 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W MUP3P38734 546 aa2.38□□□□□ -2.03
SMD1YGR074W NOP16P40007 231 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W UBP7P40453 1071 aa2.38□□□□□ -2.03
SMD1YGR074W VPS4P52917 437 aa2.38□□□□□ -2.03
SMD1YGR074W DCP2P53550 970 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W CPR8P53728 308 aa2.38□□□□□ -2.03
SMD1YGR074W CSL4P53859 292 aaPredicted RBP2.38□□□□□ -2.03
SMD1YGR074W MDM1Q01846 1127 aa2.38□□□□□ -2.03
SMD1YGR074W RPS15Q01855 142 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W UBP16Q02863 499 aa2.38□□□□□ -2.03
SMD1YGR074W YDR109CQ04585 715 aa2.38□□□□□ -2.03
SMD1YGR074W RCO1Q04779 684 aa2.38□□□□□ -2.03
SMD1YGR074W SNO4Q04902 237 aa2.38□□□□□ -2.03
SMD1YGR074W MRI1Q06489 411 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W VAM6Q07468 1049 aa2.38□□□□□ -2.03
SMD1YGR074W SLK19Q08581 821 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W HSP33Q08914 237 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W HSP32Q08992 237 aa2.38□□□□□ -2.03
SMD1YGR074W TAF3Q12297 353 aa2.38□□□□□ -2.03
SMD1YGR074W AHA1Q12449 350 aaKnown RBP2.38□□□□□ -2.03
SMD1YGR074W RTP1Q12751 981 aa2.38□□□□□ -2.03
SMD1YGR074W BI2P03873 423 aa2.37□□□□□ -2.03
SMD1YGR074W CHO2P05374 869 aaKnown RBP2.37□□□□□ -2.03
SMD1YGR074W SEC53P07283 254 aaKnown RBP2.37□□□□□ -2.03
SMD1YGR074W ILV2P07342 687 aaKnown RBP2.37□□□□□ -2.03
SMD1YGR074W CDC16P09798 840 aa2.37□□□□□ -2.03
SMD1YGR074W MRP7P12687 371 aa2.37□□□□□ -2.03
SMD1YGR074W AAC3P18238 307 aa2.37□□□□□ -2.03
SMD1YGR074W SAN1P22470 610 aa2.37□□□□□ -2.03
SMD1YGR074W SAT4P25333 603 aaKnown RBP2.37□□□□□ -2.03
SMD1YGR074W LRE1P25579 583 aaKnown RBP2.37□□□□□ -2.03
SMD1YGR074W LAC1P28496 418 aa2.37□□□□□ -2.03
SMD1YGR074W IMP2'P32351 346 aa2.37□□□□□ -2.03
SMD1YGR074W CBF2P32504 956 aa2.37□□□□□ -2.03
SMD1YGR074W PAH1P32567 862 aa2.37□□□□□ -2.03
SMD1YGR074W YMC2P38087 329 aa2.37□□□□□ -2.03
SMD1YGR074W ARO9P38840 513 aaPredicted RBP2.37□□□□□ -2.03
SMD1YGR074W DPH1P40487 425 aaKnown RBP2.37□□□□□ -2.03
SMD1YGR074W LYS14P40971 790 aa2.37□□□□□ -2.03
SMD1YGR074W CIR1P42940 261 aa2.37□□□□□ -2.03
SMD1YGR074W GAT1P43574 510 aa2.37□□□□□ -2.03
SMD1YGR074W ARC1P46672 376 aaKnown RBP2.37□□□□□ -2.03
SMD1YGR074W BNA1P47096 177 aa2.37□□□□□ -2.03
SMD1YGR074W TAM41P53230 385 aa2.37□□□□□ -2.03
SMD1YGR074W YGR079WP53249 370 aa2.37□□□□□ -2.03
SMD1YGR074W REG1Q00816 1014 aa2.37□□□□□ -2.03
SMD1YGR074W SPC19Q03954 165 aa2.37□□□□□ -2.03
SMD1YGR074W GTB1Q04924 702 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms