RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	SLN1	P39928	1220 aa	Predicted RBP	4.12	□□□□□ -1.75
SPI1	YER150W	SSP120	P39931	234 aa	Known RBP	4.12	□□□□□ -1.75
SPI1	YER150W	MND2	P40577	368 aa		4.12	□□□□□ -1.75
SPI1	YER150W	CHS6	P40955	746 aa		4.12	□□□□□ -1.75
SPI1	YER150W	YRB1	P41920	201 aa	Known RBP	4.12	□□□□□ -1.75
SPI1	YER150W	YDL183C	P48569	320 aa		4.12	□□□□□ -1.75
SPI1	YER150W	NIT3	P49954	291 aa		4.12	□□□□□ -1.75
SPI1	YER150W	UBP15	P50101	1230 aa		4.12	□□□□□ -1.75
SPI1	YER150W	UBC9	P50623	157 aa	Predicted RBP	4.12	□□□□□ -1.75
SPI1	YER150W	ALT2	P52892	507 aa		4.12	□□□□□ -1.75
SPI1	YER150W	MSN5	P52918	1224 aa		4.12	□□□□□ -1.75
SPI1	YER150W	PGA2	P53903	129 aa		4.12	□□□□□ -1.75
SPI1	YER150W	RCM1	P53972	490 aa		4.12	□□□□□ -1.75
SPI1	YER150W	KTR6	P54070	446 aa		4.12	□□□□□ -1.75
SPI1	YER150W	RPL6A	Q02326	176 aa	Known RBP	4.12	□□□□□ -1.75
SPI1	YER150W	ATC1	Q04005	294 aa		4.12	□□□□□ -1.75
SPI1	YER150W	RPN7	Q06103	429 aa	Known RBP	4.12	□□□□□ -1.75
SPI1	YER150W	EMG1	Q06287	252 aa	Known RBP	4.12	□□□□□ -1.75
SPI1	YER150W	ATG26	Q06321	1198 aa		4.12	□□□□□ -1.75
SPI1	YER150W	VAC14	Q06708	880 aa		4.12	□□□□□ -1.75
SPI1	YER150W	DIB1	Q06819	143 aa	Predicted RBP	4.12	□□□□□ -1.75
SPI1	YER150W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SPI1	YER150W	YOR296W	Q08748	1289 aa		4.12	□□□□□ -1.75
SPI1	YER150W	RIM20	Q12033	661 aa		4.12	□□□□□ -1.75
SPI1	YER150W	GNT1	Q12096	491 aa		4.12	□□□□□ -1.75
SPI1	YER150W	SWT1	Q12104	458 aa		4.12	□□□□□ -1.75
SPI1	YER150W	YVC1	Q12324	675 aa		4.12	□□□□□ -1.75
SPI1	YER150W	LDB17	Q12342	491 aa		4.12	□□□□□ -1.75
SPI1	YER150W	CTF3	Q12748	733 aa		4.12	□□□□□ -1.75
SPI1	YER150W	PRB1	P09232	635 aa		4.11	□□□□□ -1.75
SPI1	YER150W	RPL1A	P0CX43	217 aa	Known RBP	4.11	□□□□□ -1.75
SPI1	YER150W	RPL1B	P0CX44	217 aa	Known RBP	4.11	□□□□□ -1.75
SPI1	YER150W	GCD2	P12754	651 aa	Predicted RBP	4.11	□□□□□ -1.75
SPI1	YER150W	CBS1	P14066	229 aa		4.11	□□□□□ -1.75
SPI1	YER150W	DAP2	P18962	818 aa		4.11	□□□□□ -1.75
SPI1	YER150W	BUD5	P25300	642 aa	Predicted RBP	4.11	□□□□□ -1.75
SPI1	YER150W	RDS1	P25611	832 aa		4.11	□□□□□ -1.75
SPI1	YER150W	CDC15	P27636	974 aa		4.11	□□□□□ -1.75
SPI1	YER150W	ERV1	P27882	189 aa		4.11	□□□□□ -1.75
SPI1	YER150W	CAP1	P28495	268 aa	Known RBP	4.11	□□□□□ -1.75
SPI1	YER150W	PAP1	P29468	568 aa	Known RBP	4.11	□□□□□ -1.75
SPI1	YER150W	MLF3	P32047	452 aa		4.11	□□□□□ -1.75
SPI1	YER150W	EFT1	P32324	842 aa	Known RBP	4.11	□□□□□ -1.75
SPI1	YER150W	SUA5	P32579	426 aa		4.11	□□□□□ -1.75
SPI1	YER150W	LTV1	P34078	463 aa		4.11	□□□□□ -1.75
SPI1	YER150W	MAC1	P35192	417 aa		4.11	□□□□□ -1.75
SPI1	YER150W	YKL077W	P36081	392 aa		4.11	□□□□□ -1.75
SPI1	YER150W	BSD2	P38356	321 aa		4.11	□□□□□ -1.75
SPI1	YER150W	MSC7	P38694	644 aa		4.11	□□□□□ -1.75
SPI1	YER150W	TMN3	P40071	706 aa		4.11	□□□□□ -1.75
SPI1	YER150W	LRO1	P40345	661 aa		4.11	□□□□□ -1.75
SPI1	YER150W	YIR007W	P40566	764 aa		4.11	□□□□□ -1.75
SPI1	YER150W	YGL242C	P53066	181 aa		4.11	□□□□□ -1.75
SPI1	YER150W	PIB2	P53191	635 aa		4.11	□□□□□ -1.75
SPI1	YER150W	MPP6	P53725	186 aa	Predicted RBP	4.11	□□□□□ -1.75
SPI1	YER150W	ORC4	P54791	529 aa		4.11	□□□□□ -1.75
SPI1	YER150W	MTD1	Q02046	320 aa	Known RBP	4.11	□□□□□ -1.75
SPI1	YER150W	ABZ2	Q03266	374 aa		4.11	□□□□□ -1.75
SPI1	YER150W	URC2	Q04411	772 aa		4.11	□□□□□ -1.75
SPI1	YER150W	SSL1	Q04673	461 aa	Predicted RBP	4.11	□□□□□ -1.75
SPI1	YER150W	HPF1	Q05164	967 aa		4.11	□□□□□ -1.75
SPI1	YER150W	HBT1	Q07653	1046 aa	Known RBP	4.11	□□□□□ -1.75
SPI1	YER150W	NGL1	Q08213	363 aa	Known RBP	4.11	□□□□□ -1.75
SPI1	YER150W	YPL277C	Q08989	487 aa		4.11	□□□□□ -1.75
SPI1	YER150W	ENV7	Q12003	364 aa		4.11	□□□□□ -1.75
SPI1	YER150W	CMC2	Q3E7A4	109 aa		4.11	□□□□□ -1.75
SPI1	YER150W	AFI1	Q99222	893 aa		4.11	□□□□□ -1.75
SPI1	YER150W	CBP2	P03874	630 aa	Predicted RBP	4.1	□□□□□ -1.75
SPI1	YER150W	GPA1	P08539	472 aa		4.1	□□□□□ -1.75
SPI1	YER150W	FBP1	P09201	348 aa		4.1	□□□□□ -1.75
SPI1	YER150W	TAL1	P15019	335 aa	Known RBP	4.1	□□□□□ -1.75
SPI1	YER150W	YCK1	P23291	538 aa		4.1	□□□□□ -1.75
SPI1	YER150W	CYS3	P31373	394 aa	Known RBP	4.1	□□□□□ -1.75
SPI1	YER150W	DGR2	P32330	852 aa		4.1	□□□□□ -1.75
SPI1	YER150W	HXT4	P32467	576 aa		4.1	□□□□□ -1.75
SPI1	YER150W	ERG1	P32476	496 aa	Known RBP	4.1	□□□□□ -1.75
SPI1	YER150W	TPO5	P36029	618 aa		4.1	□□□□□ -1.75
SPI1	YER150W	ADD66	P36040	267 aa		4.1	□□□□□ -1.75
SPI1	YER150W	YKR018C	P36114	725 aa		4.1	□□□□□ -1.75
SPI1	YER150W	MRPL37	P36532	105 aa		4.1	□□□□□ -1.75
SPI1	YER150W	GLY1	P37303	387 aa	Known RBP	4.1	□□□□□ -1.75
SPI1	YER150W	MAK5	P38112	773 aa	Predicted RBP	4.1	□□□□□ -1.75
SPI1	YER150W	BZZ1	P38822	633 aa		4.1	□□□□□ -1.75
SPI1	YER150W	PFK26	P40433	827 aa	Known RBP	4.1	□□□□□ -1.75
SPI1	YER150W	ASG1	P40467	964 aa		4.1	□□□□□ -1.75
SPI1	YER150W	MSS2	P40990	351 aa		4.1	□□□□□ -1.75
SPI1	YER150W	IAH1	P41734	238 aa		4.1	□□□□□ -1.75
SPI1	YER150W	IRC5	P43610	853 aa		4.1	□□□□□ -1.75
SPI1	YER150W	ALY2	P47029	1046 aa		4.1	□□□□□ -1.75
SPI1	YER150W	YGR111W	P53265	400 aa		4.1	□□□□□ -1.75
SPI1	YER150W	AQR1	P53943	586 aa		4.1	□□□□□ -1.75
SPI1	YER150W	MUK1	Q02866	612 aa		4.1	□□□□□ -1.75
SPI1	YER150W	ROY1	Q04847	553 aa		4.1	□□□□□ -1.75
SPI1	YER150W	YLR455W	Q06188	304 aa		4.1	□□□□□ -1.75
SPI1	YER150W	YIG1	Q08956	461 aa		4.1	□□□□□ -1.75
SPI1	YER150W	RKM1	Q08961	583 aa	Predicted RBP	4.1	□□□□□ -1.75
SPI1	YER150W	UBX3	Q12229	455 aa		4.1	□□□□□ -1.75
SPI1	YER150W	MED4	Q12343	284 aa		4.1	□□□□□ -1.75
SPI1	YER150W	MRPL23	Q12487	163 aa	Predicted RBP	4.1	□□□□□ -1.75
SPI1	YER150W	LAG2	Q92325	660 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms