RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	RAD1	P06777	1100 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	RPL40A	P0CH08	128 aa	Known RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	RPL40B	P0CH09	128 aa	Known RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	URA7	P28274	579 aa	Known RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	UTR2	P32623	467 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	ADD66	P36040	267 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	YBP1	P38315	674 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	CRP1	P38845	465 aa	Known RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	PCF11	P39081	626 aa	Predicted RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	PIK1	P39104	1066 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	SMX2	P40204	77 aa	Known RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	ROK1	P45818	564 aa	Predicted RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	NUP84	P52891	726 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	RNT1	Q02555	471 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	RLI1	Q03195	608 aa	Known RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	CLU1	Q03690	1277 aa	Known RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	ARP9	Q05123	467 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	YCS4	Q06156	1176 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	JIP5	Q06214	492 aa	Predicted RBP	6.59	□□□□□ -1.35
VMA3	YEL027W	HOS1	Q12214	470 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	AFI1	Q99222	893 aa		6.59	□□□□□ -1.35
VMA3	YEL027W	ILS1	P09436	1072 aa	Known RBP	6.58	□□□□□ -1.36
VMA3	YEL027W	ERR1	P0CX10	437 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	ERR2	P0CX11	437 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	PYC1	P11154	1178 aa	Known RBP	6.58	□□□□□ -1.36
VMA3	YEL027W	MRPL25	P23369	157 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	PMI40	P29952	429 aa	Known RBP	6.58	□□□□□ -1.36
VMA3	YEL027W	MRS6	P32864	603 aa	Known RBP	6.58	□□□□□ -1.36
VMA3	YEL027W	PEX5	P35056	612 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	YHL041W	P38730	149 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	SMF2	P38778	549 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	CCT2	P39076	527 aa	Known RBP	6.58	□□□□□ -1.36
VMA3	YEL027W	ELO3	P40319	345 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	RRN7	P40992	514 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	ERR3	P42222	437 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	TAH11	P47112	604 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	RSM7	P47150	247 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	PEX13	P80667	386 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	MET14	Q02196	202 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	SMA1	Q02651	245 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	LCB5	Q06147	687 aa	Known RBP	6.58	□□□□□ -1.36
VMA3	YEL027W	RSB1	Q08417	382 aa		6.58	□□□□□ -1.36
VMA3	YEL027W	COX5A	P00424	153 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	RAD3	P06839	778 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	HSP60	P19882	572 aa	Known RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	GID7	P25569	745 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	KAR4	P25583	335 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	CDC20	P26309	610 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	YJU3	P28321	313 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	HEM12	P32347	362 aa	Predicted RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	KAR9	P32526	644 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	TYE7	P33122	291 aa	Predicted RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	MRPL40	P36534	297 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	DPH1	P40487	425 aa	Known RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	URB2	P47108	1174 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	DAN4	P47179	1161 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	ASN2	P49090	572 aa	Known RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	YNR063W	P53749	607 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	SLU7	Q02775	382 aa	Known RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	ADE13	Q05911	482 aa	Known RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	PEX15	Q08215	383 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	CUE5	Q08412	411 aa	Known RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	PGC1	Q08959	321 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	RUD3	Q12234	484 aa	Known RBP	6.57	□□□□□ -1.36
VMA3	YEL027W	TEL1	P38110	2787 aa		6.57	□□□□□ -1.36
VMA3	YEL027W	ENO1	P00924	437 aa	Known RBP	6.56	□□□□□ -1.36
VMA3	YEL027W	HSF1	P10961	833 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	MIH1	P23748	554 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	ILV6	P25605	309 aa	Known RBP	6.56	□□□□□ -1.36
VMA3	YEL027W	PYC2	P32327	1180 aa	Known RBP	6.56	□□□□□ -1.36
VMA3	YEL027W	NDI1	P32340	513 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	APM3	P38153	483 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	SAP1	P39955	897 aa	Known RBP	6.56	□□□□□ -1.36
VMA3	YEL027W	YJR061W	P40355	935 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	ALA1	P40825	983 aa	Known RBP	6.56	□□□□□ -1.36
VMA3	YEL027W	AIM23	P47015	356 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	TRF5	P48561	642 aa	Known RBP	6.56	□□□□□ -1.36
VMA3	YEL027W	ZIP2	P53061	704 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	YTP1	P53584	459 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	SIW14	P53965	281 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	CDC14	Q00684	551 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	RSC4	Q02206	625 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	USA1	Q03714	838 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	YMR160W	Q03823	816 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	UTP13	Q05946	817 aa	Known RBP	6.56	□□□□□ -1.36
VMA3	YEL027W	LDB18	Q07887	179 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	LDB17	Q12342	491 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	OCA6	Q12454	224 aa		6.56	□□□□□ -1.36
VMA3	YEL027W	ARG4	P04076	463 aa	Predicted RBP	6.55	□□□□□ -1.36
VMA3	YEL027W	RPB2	P08518	1224 aa	Known RBP	6.55	□□□□□ -1.36
VMA3	YEL027W	GPA2	P10823	449 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	DAL81	P21657	970 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	URA10	P30402	227 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	CCR4	P31384	837 aa	Known RBP	6.55	□□□□□ -1.36
VMA3	YEL027W	SMI1	P32566	505 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	SRP101	P32916	621 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	PXA2	P34230	853 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	OAF3	P36023	863 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	TGL4	P36165	910 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	IST3	P40565	148 aa	Predicted RBP	6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms