RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W ARO3P14843 370 aaKnown RBP5.9□□□□□ -1.46
VMS1YDR049W BUD5P25300 642 aaPredicted RBP5.9□□□□□ -1.46
VMS1YDR049W EMC1P25574 760 aa5.9□□□□□ -1.46
VMS1YDR049W KNS1P32350 737 aaPredicted RBP5.9□□□□□ -1.46
VMS1YDR049W AFG2P32794 780 aa5.9□□□□□ -1.46
VMS1YDR049W PNT1P38969 423 aa5.9□□□□□ -1.46
VMS1YDR049W LRO1P40345 661 aa5.9□□□□□ -1.46
VMS1YDR049W ROK1P45818 564 aaPredicted RBP5.9□□□□□ -1.46
VMS1YDR049W DCP2P53550 970 aaKnown RBP5.9□□□□□ -1.46
VMS1YDR049W UTP5Q04177 643 aaKnown RBP5.9□□□□□ -1.46
VMS1YDR049W ROY1Q04847 553 aa5.9□□□□□ -1.46
VMS1YDR049W BCP1Q06338 283 aa5.9□□□□□ -1.46
VMS1YDR049W LOT6Q07923 191 aa5.9□□□□□ -1.46
VMS1YDR049W RIM20Q12033 661 aa5.9□□□□□ -1.46
VMS1YDR049W RTK1Q12100 620 aaPredicted RBP5.9□□□□□ -1.46
VMS1YDR049W AFI1Q99222 893 aa5.9□□□□□ -1.46
VMS1YDR049W PDC6P26263 563 aaKnown RBP5.9□□□□□ -1.47
VMS1YDR049W COT1P32798 439 aa5.9□□□□□ -1.47
VMS1YDR049W TPO5P36029 618 aa5.9□□□□□ -1.47
VMS1YDR049W YBL029WP38201 376 aa5.9□□□□□ -1.47
VMS1YDR049W KSP1P38691 1029 aaKnown RBP5.9□□□□□ -1.47
VMS1YDR049W MSR1P38714 643 aa5.9□□□□□ -1.47
VMS1YDR049W TCD1P38756 429 aa5.9□□□□□ -1.47
VMS1YDR049W SSP120P39931 234 aaKnown RBP5.9□□□□□ -1.47
VMS1YDR049W MCM6P53091 1017 aaKnown RBP5.9□□□□□ -1.47
VMS1YDR049W MNT4P53745 580 aa5.9□□□□□ -1.47
VMS1YDR049W RCM1P53972 490 aa5.9□□□□□ -1.47
VMS1YDR049W MRPS17Q03246 237 aaPredicted RBP5.9□□□□□ -1.47
VMS1YDR049W LDB17Q12342 491 aa5.9□□□□□ -1.47
VMS1YDR049W ARG80P07249 177 aa5.89□□□□□ -1.47
VMS1YDR049W YEL076C-AP0CX16 216 aa5.89□□□□□ -1.47
VMS1YDR049W YLR464WP0CX17 216 aa5.89□□□□□ -1.47
VMS1YDR049W NFS1P25374 497 aa5.89□□□□□ -1.47
VMS1YDR049W DGR2P32330 852 aa5.89□□□□□ -1.47
VMS1YDR049W MRP20P32387 263 aa5.89□□□□□ -1.47
VMS1YDR049W FRD1P32614 470 aaKnown RBP5.89□□□□□ -1.47
VMS1YDR049W YKR051WP36142 418 aa5.89□□□□□ -1.47
VMS1YDR049W UGA2P38067 497 aa5.89□□□□□ -1.47
VMS1YDR049W MTW1P39731 289 aa5.89□□□□□ -1.47
VMS1YDR049W YEL076CP39971 216 aa5.89□□□□□ -1.47
VMS1YDR049W PFK26P40433 827 aaKnown RBP5.89□□□□□ -1.47
VMS1YDR049W MAD2P40958 196 aa5.89□□□□□ -1.47
VMS1YDR049W VMA13P41807 478 aaKnown RBP5.89□□□□□ -1.47
VMS1YDR049W PIB2P53191 635 aa5.89□□□□□ -1.47
VMS1YDR049W ORC4P54791 529 aa5.89□□□□□ -1.47
VMS1YDR049W ARX1Q03862 593 aaKnown RBP5.89□□□□□ -1.47
VMS1YDR049W PEX19Q07418 342 aa5.89□□□□□ -1.47
VMS1YDR049W ENT4Q07872 247 aa5.89□□□□□ -1.47
VMS1YDR049W MRPL23Q12487 163 aaPredicted RBP5.89□□□□□ -1.47
VMS1YDR049W RPL6BP05739 176 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W FUS3P16892 353 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W BOS1P25385 244 aa5.88□□□□□ -1.47
VMS1YDR049W CRM1P30822 1084 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W GLG1P36143 616 aa5.88□□□□□ -1.47
VMS1YDR049W ALG3P38179 458 aa5.88□□□□□ -1.47
VMS1YDR049W TOM71P38825 639 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W WSS1P38838 269 aa5.88□□□□□ -1.47
VMS1YDR049W REV7P38927 245 aa5.88□□□□□ -1.47
VMS1YDR049W SLN1P39928 1220 aaPredicted RBP5.88□□□□□ -1.47
VMS1YDR049W YRB2P40517 327 aa5.88□□□□□ -1.47
VMS1YDR049W BRE2P43132 505 aa5.88□□□□□ -1.47
VMS1YDR049W PPT1P53043 513 aa5.88□□□□□ -1.47
VMS1YDR049W RET3P53600 189 aa5.88□□□□□ -1.47
VMS1YDR049W MPP6P53725 186 aaPredicted RBP5.88□□□□□ -1.47
VMS1YDR049W RPL6AQ02326 176 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W RAD30Q04049 632 aa5.88□□□□□ -1.47
VMS1YDR049W URC2Q04411 772 aa5.88□□□□□ -1.47
VMS1YDR049W YIG1Q08956 461 aa5.88□□□□□ -1.47
VMS1YDR049W UBX3Q12229 455 aa5.88□□□□□ -1.47
VMS1YDR049W LAM4P38800 1345 aa5.88□□□□□ -1.47
VMS1YDR049W YLR302CO13544 120 aa5.88□□□□□ -1.47
VMS1YDR049W MOD5P07884 428 aa5.88□□□□□ -1.47
VMS1YDR049W TAL1P15019 335 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W RPI1P23250 407 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W RIT1P23796 513 aa5.88□□□□□ -1.47
VMS1YDR049W PAP1P29468 568 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W LTV1P34078 463 aa5.88□□□□□ -1.47
VMS1YDR049W UBP13P38187 747 aa5.88□□□□□ -1.47
VMS1YDR049W ULP2P40537 1034 aaPredicted RBP5.88□□□□□ -1.47
VMS1YDR049W MND2P40577 368 aa5.88□□□□□ -1.47
VMS1YDR049W IAH1P41734 238 aa5.88□□□□□ -1.47
VMS1YDR049W PTK2P47116 818 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W IMA1P53051 589 aa5.88□□□□□ -1.47
VMS1YDR049W KTR6P54070 446 aa5.88□□□□□ -1.47
VMS1YDR049W YPL062WQ02781 134 aa5.88□□□□□ -1.47
VMS1YDR049W RKM2Q03942 479 aa5.88□□□□□ -1.47
VMS1YDR049W SSL1Q04673 461 aaPredicted RBP5.88□□□□□ -1.47
VMS1YDR049W LEU9Q12166 604 aaKnown RBP5.88□□□□□ -1.47
VMS1YDR049W COX17Q12287 69 aa5.88□□□□□ -1.47
VMS1YDR049W HIR3P47171 1648 aa5.87□□□□□ -1.47
VMS1YDR049W TY1A-LR4P0C2I8 440 aaKnown RBP5.87□□□□□ -1.47
VMS1YDR049W TY1A-DR6P0CX70 440 aa5.87□□□□□ -1.47
VMS1YDR049W TY1A-ER1P0CX71 440 aa5.87□□□□□ -1.47
VMS1YDR049W TY1A-LR2P0CX72 440 aa5.87□□□□□ -1.47
VMS1YDR049W TY1A-PLP0CX73 440 aa5.87□□□□□ -1.47
VMS1YDR049W TY1A-JR1P0CX74 440 aa5.87□□□□□ -1.47
VMS1YDR049W TY1A-LR3P0CX75 440 aa5.87□□□□□ -1.47
VMS1YDR049W TY1A-ML2P0CX76 440 aa5.87□□□□□ -1.47
VMS1YDR049W PAT1P25644 796 aaKnown RBP5.87□□□□□ -1.47
VMS1YDR049W NEM1P38757 446 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms