RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	TLG1	Q03322	224 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	PML1	Q07930	204 aa	Predicted RBP	3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	RCN2	Q12044	265 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	CEX1	Q12453	761 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	URK1	P27515	501 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	MGM1	P32266	881 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	SEC66	P33754	206 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	TDP1	P38319	544 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	PRP31	P49704	494 aa	Predicted RBP	3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	NCS6	P53088	359 aa		3.11	□□□□□ -1.91
YDR034C-D	YDR034C-D	PET122	P10355	254 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	STE12	P13574	688 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	ECM1	P39715	212 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	LRO1	P40345	661 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	ERG5	P54781	538 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	VPS64	Q03944	604 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	ROY1	Q04847	553 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	RPN5	Q12250	445 aa	Known RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	PWP1	P21304	576 aa	Known RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	CPR2	P23285	205 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	YSP3	P25036	478 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	GDI1	P39958	451 aa	Known RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	PCL7	P40186	285 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	SHE4	P51534	789 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	PUS2	P53167	370 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	GPN2	Q08726	347 aa	Predicted RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	HUA2	Q12134	243 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	TRX1	P22217	103 aa	Known RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	YSW1	P38280	609 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	SFB3	P38810	929 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	MTR3	P48240	250 aa	Predicted RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	BUD9	P53226	547 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	TEX1	P53851	422 aa	Known RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
YDR034C-D	YDR034C-D	CHS5	Q12114	671 aa	Known RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	ECM3	Q99252	613 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	FTH1	P38310	465 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	YIL161W	P40449	235 aa	Known RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	FMS1	P50264	508 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	REC102	Q02721	264 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	DPB4	Q04603	196 aa	Known RBP	3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	UAF30	Q08747	228 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	BUD7	Q08754	746 aa		3.1	□□□□□ -1.91
YDR034C-D	YDR034C-D	YLR302C	O13544	120 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	ATP2	P00830	511 aa	Known RBP	3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	MRPL36	P36531	177 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	UBP7	P40453	1071 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	JJJ3	P47138	172 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	LCL3	P53153	274 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	IMO32	P53219	342 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	YDR444W	Q04093	687 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	RTT109	Q07794	436 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	POM34	Q12445	299 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	YLR415C	O13578	112 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	SES1	P07284	462 aa	Known RBP	3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	AUR1	P36107	401 aa	Predicted RBP	3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	ZIM17	P42844	174 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	RPT6	Q01939	405 aa	Known RBP	3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	ATG21	Q02887	496 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	TAP42	Q04372	366 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	RNH1	Q04740	348 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	RRP43	P25359	394 aa	Predicted RBP	3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	YCR051W	P25631	222 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	YCR061W	P25639	631 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	DCG1	P32460	244 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	RIB7	P33312	244 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	WBP1	P33767	430 aa	Known RBP	3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	TOS1	P38288	455 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	INA17	Q02888	182 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	BMS1	Q08965	1183 aa	Known RBP	3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	PNO1	Q99216	274 aa	Known RBP	3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	YOR019W	Q99248	730 aa		3.09	□□□□□ -1.91
YDR034C-D	YDR034C-D	AI3	P03877	415 aa		3.09	□□□□□ -1.92
YDR034C-D	YDR034C-D	YCR015C	P25616	317 aa		3.09	□□□□□ -1.92
YDR034C-D	YDR034C-D	SFA1	P32771	386 aa		3.09	□□□□□ -1.92
YDR034C-D	YDR034C-D	BAP3	P41815	604 aa		3.09	□□□□□ -1.92
YDR034C-D	YDR034C-D	NBP2	Q12163	236 aa		3.09	□□□□□ -1.92
YDR034C-D	YDR034C-D	LPX1	Q12405	387 aa	Known RBP	3.09	□□□□□ -1.92
YDR034C-D	YDR034C-D	YJR112W-A	Q3E743	109 aa		3.09	□□□□□ -1.92
YDR034C-D	YDR034C-D	RPL1A	P0CX43	217 aa	Known RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	RPL1B	P0CX44	217 aa	Known RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
YDR034C-D	YDR034C-D	WHI3	P34761	661 aa	Known RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	CHA4	P43634	648 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	VBA4	Q04602	768 aa	Known RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	RQC1	Q05468	723 aa	Known RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	LEU9	Q12166	604 aa	Known RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	Q0010	Q9ZZX9	128 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	GEX1	P25596	615 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	YEL043W	P32618	956 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	YME1	P32795	747 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	ZRG8	P40021	1076 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	RTT105	P40063	208 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	ZAP1	P47043	880 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	OCA1	P50946	238 aa	Predicted RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	SQS1	P53866	767 aa	Known RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	PLB2	Q03674	706 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	RBA50	Q04418	439 aa		3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	DBP9	Q06218	594 aa	Known RBP	3.08	□□□□□ -1.92
YDR034C-D	YDR034C-D	LAT1	P12695	482 aa	Known RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms