RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YPR027CQ12079 277 aa1.83□□□□□ -2.12
TRM3YDL112W RNR2P09938 399 aaKnown RBP1.83□□□□□ -2.12
TRM3YDL112W GLN4P13188 809 aaKnown RBP1.83□□□□□ -2.12
TRM3YDL112W HOG1P32485 435 aa1.83□□□□□ -2.12
TRM3YDL112W ECM32P32644 1121 aaKnown RBP1.83□□□□□ -2.12
TRM3YDL112W CSE2P33308 149 aa1.83□□□□□ -2.12
TRM3YDL112W APT2P36973 181 aa1.83□□□□□ -2.12
TRM3YDL112W MPT5P39016 859 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
TRM3YDL112W PCF11P39081 626 aaPredicted RBP1.83□□□□□ -2.12
TRM3YDL112W BTT1P40314 149 aaPredicted RBP1.83□□□□□ -2.12
TRM3YDL112W MAF1P41910 395 aa1.83□□□□□ -2.12
TRM3YDL112W MRX6P48564 524 aa1.83□□□□□ -2.12
TRM3YDL112W TAM41P53230 385 aa1.83□□□□□ -2.12
TRM3YDL112W SNP1Q00916 300 aaPredicted RBP1.83□□□□□ -2.12
TRM3YDL112W DCS2Q12123 353 aa1.83□□□□□ -2.12
TRM3YDL112W CDC6P09119 513 aa1.83□□□□□ -2.12
TRM3YDL112W ISY1P21374 235 aaPredicted RBP1.83□□□□□ -2.12
TRM3YDL112W STE11P23561 717 aa1.83□□□□□ -2.12
TRM3YDL112W DSS4P32601 143 aa1.83□□□□□ -2.12
TRM3YDL112W UBP13P38187 747 aa1.83□□□□□ -2.12
TRM3YDL112W YIR016WP40572 265 aa1.83□□□□□ -2.12
TRM3YDL112W VTC2P43585 828 aa1.83□□□□□ -2.12
TRM3YDL112W PMT3P47190 753 aa1.83□□□□□ -2.12
TRM3YDL112W PEX14P53112 341 aa1.83□□□□□ -2.12
TRM3YDL112W DIP5P53388 608 aa1.83□□□□□ -2.12
TRM3YDL112W SPC98P53540 846 aa1.83□□□□□ -2.12
TRM3YDL112W CBK1P53894 756 aa1.83□□□□□ -2.12
TRM3YDL112W ARK1P53974 638 aa1.83□□□□□ -2.12
TRM3YDL112W GPD1Q00055 391 aaKnown RBP1.83□□□□□ -2.12
TRM3YDL112W CEG1Q01159 459 aaPredicted RBP1.83□□□□□ -2.12
TRM3YDL112W UGO1Q03327 502 aa1.83□□□□□ -2.12
TRM3YDL112W BSP1Q06604 576 aa1.83□□□□□ -2.12
TRM3YDL112W CSR1Q06705 408 aaKnown RBP1.83□□□□□ -2.12
TRM3YDL112W CIR2Q08822 631 aa1.83□□□□□ -2.12
TRM3YDL112W LEA1Q08963 238 aaPredicted RBP1.83□□□□□ -2.12
TRM3YDL112W PGA3Q12746 312 aaKnown RBP1.83□□□□□ -2.12
TRM3YDL112W CTF3Q12748 733 aa1.83□□□□□ -2.12
TRM3YDL112W CUP1-1P0CX80 61 aa1.82□□□□□ -2.12
TRM3YDL112W CUP1-2P0CX81 61 aa1.82□□□□□ -2.12
TRM3YDL112W GPI10P30777 616 aa1.82□□□□□ -2.12
TRM3YDL112W HIR1P32479 840 aa1.82□□□□□ -2.12
TRM3YDL112W YKL023WP36103 277 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W HEL1P36113 551 aa1.82□□□□□ -2.12
TRM3YDL112W MRPL40P36534 297 aa1.82□□□□□ -2.12
TRM3YDL112W ATG12P38316 186 aa1.82□□□□□ -2.12
TRM3YDL112W RPP1P38786 293 aa1.82□□□□□ -2.12
TRM3YDL112W FTR1P40088 404 aa1.82□□□□□ -2.12
TRM3YDL112W IES1P43579 692 aa1.82□□□□□ -2.12
TRM3YDL112W SCD6P45978 349 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
TRM3YDL112W ASN1P49089 572 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W RPS21BQ3E754 87 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W MET3P08536 511 aa1.82□□□□□ -2.12
TRM3YDL112W HRR25P29295 494 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W RAD16P31244 790 aa1.82□□□□□ -2.12
TRM3YDL112W NGG1P32494 702 aa1.82□□□□□ -2.12
TRM3YDL112W COY1P34237 679 aa1.82□□□□□ -2.12
TRM3YDL112W SHE3P38272 425 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W FHL1P39521 936 aa1.82□□□□□ -2.12
TRM3YDL112W SAD1P43589 448 aa1.82□□□□□ -2.12
TRM3YDL112W ZIP2P53061 704 aa1.82□□□□□ -2.12
TRM3YDL112W TDA7P53882 636 aaPredicted RBP1.82□□□□□ -2.12
TRM3YDL112W PGA2P53903 129 aa1.82□□□□□ -2.12
TRM3YDL112W SMD2Q06217 110 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W TRE2Q08693 809 aa1.82□□□□□ -2.12
TRM3YDL112W TAF10Q12030 206 aa1.82□□□□□ -2.12
TRM3YDL112W CET1O13297 549 aaPredicted RBP1.82□□□□□ -2.12
TRM3YDL112W FRS2P15625 503 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W COX11P19516 300 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W VPS3P23643 1011 aa1.82□□□□□ -2.12
TRM3YDL112W PEX34P25584 144 aa1.82□□□□□ -2.12
TRM3YDL112W CSE1P33307 960 aa1.82□□□□□ -2.12
TRM3YDL112W GCS1P35197 352 aa1.82□□□□□ -2.12
TRM3YDL112W SHM2P37291 469 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W YMC2P38087 329 aa1.82□□□□□ -2.12
TRM3YDL112W VID24P38263 362 aa1.82□□□□□ -2.12
TRM3YDL112W KAP123P40069 1113 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W MUP1P50276 574 aa1.82□□□□□ -2.12
TRM3YDL112W MAL11P53048 616 aa1.82□□□□□ -2.12
TRM3YDL112W RSC1P53236 928 aa1.82□□□□□ -2.12
TRM3YDL112W IMP4P53941 290 aaKnown RBP1.82□□□□□ -2.12
TRM3YDL112W MUS81Q04149 632 aaPredicted RBP1.82□□□□□ -2.12
TRM3YDL112W NBL1Q3E7Y6 73 aa1.82□□□□□ -2.12
TRM3YDL112W ASP3-2P0CX77 362 aa1.82□□□□□ -2.12
TRM3YDL112W ASP3-3P0CX78 362 aa1.82□□□□□ -2.12
TRM3YDL112W ASP3-4P0CX79 362 aa1.82□□□□□ -2.12
TRM3YDL112W ASP3-1P0CZ17 362 aa1.82□□□□□ -2.12
TRM3YDL112W PCL2P25693 308 aa1.82□□□□□ -2.12
TRM3YDL112W TOM20P35180 183 aa1.82□□□□□ -2.12
TRM3YDL112W SIT1P39980 628 aa1.82□□□□□ -2.12
TRM3YDL112W TAN1P53072 289 aaPredicted RBP1.82□□□□□ -2.12
TRM3YDL112W TMN2Q04562 672 aa1.82□□□□□ -2.12
TRM3YDL112W VHS3Q08438 674 aa1.82□□□□□ -2.12
TRM3YDL112W RPS14AP06367 137 aaKnown RBP1.81□□□□□ -2.12
TRM3YDL112W MAS1P10507 462 aa1.81□□□□□ -2.12
TRM3YDL112W SGF29P25554 259 aa1.81□□□□□ -2.12
TRM3YDL112W TKL2P33315 681 aa1.81□□□□□ -2.12
TRM3YDL112W ECM13P38195 257 aa1.81□□□□□ -2.12
TRM3YDL112W CTM1P38818 585 aa1.81□□□□□ -2.12
TRM3YDL112W RPS14BP39516 138 aaKnown RBP1.81□□□□□ -2.12
TRM3YDL112W DSE1P40077 573 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms