RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C YPT11P48559 417 aa3.68□□□□□ -1.82
TRS20YBR254C ORC5P50874 479 aa3.68□□□□□ -1.82
TRS20YBR254C YNL034WP53963 612 aa3.68□□□□□ -1.82
TRS20YBR254C ECM22Q05958 814 aaPredicted RBP3.68□□□□□ -1.82
TRS20YBR254C YPL191CQ08930 360 aa3.68□□□□□ -1.82
TRS20YBR254C PTC6P25646 442 aa3.67□□□□□ -1.82
TRS20YBR254C RPF2P36160 344 aaKnown RBP3.67□□□□□ -1.82
TRS20YBR254C IMA5P40884 581 aa3.67□□□□□ -1.82
TRS20YBR254C TES1P41903 349 aaKnown RBP3.67□□□□□ -1.82
TRS20YBR254C PUS4P48567 403 aaKnown RBP3.67□□□□□ -1.82
TRS20YBR254C YMR034CQ05131 434 aaPredicted RBP3.67□□□□□ -1.82
TRS20YBR254C DSE3Q08729 430 aa3.67□□□□□ -1.82
TRS20YBR254C SIP1P32578 815 aa3.66□□□□□ -1.82
TRS20YBR254C ARC40P38328 384 aaKnown RBP3.66□□□□□ -1.82
TRS20YBR254C ARN1P38731 627 aa3.66□□□□□ -1.82
TRS20YBR254C CCT4P39078 528 aaKnown RBP3.66□□□□□ -1.82
TRS20YBR254C PEX14P53112 341 aa3.66□□□□□ -1.82
TRS20YBR254C YPR003CP53394 754 aa3.66□□□□□ -1.82
TRS20YBR254C VPS64Q03944 604 aa3.66□□□□□ -1.82
TRS20YBR254C MLH2Q07980 695 aa3.66□□□□□ -1.82
TRS20YBR254C TAF5P38129 798 aa3.65□□□□□ -1.83
TRS20YBR254C SWD1P39706 426 aa3.65□□□□□ -1.83
TRS20YBR254C NPA3P47122 385 aa3.65□□□□□ -1.83
TRS20YBR254C ESF2P53743 316 aaKnown RBP3.65□□□□□ -1.83
TRS20YBR254C YNL144CP53907 740 aa3.65□□□□□ -1.83
TRS20YBR254C CRD1Q07560 283 aa3.65□□□□□ -1.83
TRS20YBR254C AIM6Q07716 390 aa3.65□□□□□ -1.83
TRS20YBR254C LEA1Q08963 238 aaPredicted RBP3.65□□□□□ -1.83
TRS20YBR254C RPL42AP0CX27 106 aaKnown RBP3.64□□□□□ -1.83
TRS20YBR254C RPL42BP0CX28 106 aaKnown RBP3.64□□□□□ -1.83
TRS20YBR254C YLF2P38746 405 aa3.64□□□□□ -1.83
TRS20YBR254C MET30P39014 640 aa3.64□□□□□ -1.83
TRS20YBR254C THI3Q07471 609 aa3.64□□□□□ -1.83
TRS20YBR254C AAD4Q07747 329 aa3.64□□□□□ -1.83
TRS20YBR254C YFL068WP0CX99 160 aa3.63□□□□□ -1.83
TRS20YBR254C YLL066W-AP0CY00 160 aa3.63□□□□□ -1.83
TRS20YBR254C YLL067W-AP0CY01 160 aa3.63□□□□□ -1.83
TRS20YBR254C PDE1P22434 369 aa3.63□□□□□ -1.83
TRS20YBR254C MSS51P32335 436 aa3.63□□□□□ -1.83
TRS20YBR254C SDS22P36047 338 aa3.63□□□□□ -1.83
TRS20YBR254C SAW1P39735 261 aa3.63□□□□□ -1.83
TRS20YBR254C CDC1P40986 491 aa3.63□□□□□ -1.83
TRS20YBR254C CNM67P53865 581 aaKnown RBP3.63□□□□□ -1.83
TRS20YBR254C GSH2Q08220 491 aa3.63□□□□□ -1.83
TRS20YBR254C NRT1Q08485 598 aa3.63□□□□□ -1.83
TRS20YBR254C ICL2Q12031 575 aa3.63□□□□□ -1.83
TRS20YBR254C YBR255C-AQ3E776 120 aa3.63□□□□□ -1.83
TRS20YBR254C COX1P00401 534 aa3.62□□□□□ -1.83
TRS20YBR254C VPS41P38959 992 aa3.62□□□□□ -1.83
TRS20YBR254C YIL169CP40442 995 aa3.62□□□□□ -1.83
TRS20YBR254C GIS2P53849 153 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
TRS20YBR254C PDR8Q06149 701 aa3.62□□□□□ -1.83
TRS20YBR254C LAC1P28496 418 aa3.61□□□□□ -1.83
TRS20YBR254C NIC96P34077 839 aa3.61□□□□□ -1.83
TRS20YBR254C PAF1P38351 445 aa3.61□□□□□ -1.83
TRS20YBR254C TPA1P40032 644 aaKnown RBP3.61□□□□□ -1.83
TRS20YBR254C ASK10P48361 1146 aa3.61□□□□□ -1.83
TRS20YBR254C DIG1Q03063 452 aaKnown RBP3.61□□□□□ -1.83
TRS20YBR254C GRS2Q06817 618 aa3.61□□□□□ -1.83
TRS20YBR254C SWC3P31376 625 aa3.6□□□□□ -1.83
TRS20YBR254C OCT1P35999 772 aa3.6□□□□□ -1.83
TRS20YBR254C YGL036WP53185 909 aaPredicted RBP3.6□□□□□ -1.83
TRS20YBR254C FOL1P53848 824 aa3.6□□□□□ -1.83
TRS20YBR254C CEG1Q01159 459 aaPredicted RBP3.6□□□□□ -1.83
TRS20YBR254C ECM16Q04217 1267 aaKnown RBP3.6□□□□□ -1.83
TRS20YBR254C YOR111WQ99210 232 aa3.6□□□□□ -1.83
TRS20YBR254C HES1P35843 434 aa3.59□□□□□ -1.83
TRS20YBR254C YGR079WP53249 370 aa3.59□□□□□ -1.83
TRS20YBR254C EAF7P53911 425 aaKnown RBP3.59□□□□□ -1.83
TRS20YBR254C PIG1Q06216 648 aa3.59□□□□□ -1.83
TRS20YBR254C YLR112WQ12130 139 aa3.59□□□□□ -1.83
TRS20YBR254C FRD1P32614 470 aaKnown RBP3.58□□□□□ -1.84
TRS20YBR254C FUN12P39730 1002 aaKnown RBP3.58□□□□□ -1.84
TRS20YBR254C VPS25P47142 202 aa3.58□□□□□ -1.84
TRS20YBR254C YTH1Q06102 208 aaPredicted RBP3.58□□□□□ -1.84
TRS20YBR254C MCH4Q08268 501 aa3.58□□□□□ -1.84
TRS20YBR254C ARP7Q12406 477 aa3.58□□□□□ -1.84
TRS20YBR254C QRI7P43122 407 aa3.57□□□□□ -1.84
TRS20YBR254C MAD3P47074 515 aa3.57□□□□□ -1.84
TRS20YBR254C YGL260WP53056 76 aa3.57□□□□□ -1.84
TRS20YBR254C YRB30P53107 440 aaPredicted RBP3.57□□□□□ -1.84
TRS20YBR254C BET4Q00618 327 aa3.57□□□□□ -1.84
TRS20YBR254C IZH1Q03419 316 aa3.57□□□□□ -1.84
TRS20YBR254C YDR109CQ04585 715 aa3.57□□□□□ -1.84
TRS20YBR254C FRE3Q08905 711 aa3.57□□□□□ -1.84
TRS20YBR254C YCR006CP25350 157 aa3.56□□□□□ -1.84
TRS20YBR254C MNN2P38069 597 aa3.56□□□□□ -1.84
TRS20YBR254C STT3P39007 718 aaKnown RBP3.56□□□□□ -1.84
TRS20YBR254C YND1P40009 630 aa3.56□□□□□ -1.84
TRS20YBR254C UBX6P47049 396 aa3.56□□□□□ -1.84
TRS20YBR254C YER145C-AA0A023PYF4 145 aa3.55□□□□□ -1.84
TRS20YBR254C PHO2P07269 559 aa3.55□□□□□ -1.84
TRS20YBR254C MRC1P25588 1096 aa3.55□□□□□ -1.84
TRS20YBR254C URK1P27515 501 aa3.55□□□□□ -1.84
TRS20YBR254C RTT107P38850 1070 aa3.55□□□□□ -1.84
TRS20YBR254C PCL6P40038 420 aa3.55□□□□□ -1.84
TRS20YBR254C SAD1P43589 448 aa3.55□□□□□ -1.84
TRS20YBR254C HOS2P53096 452 aaPredicted RBP3.55□□□□□ -1.84
TRS20YBR254C TAM41P53230 385 aa3.55□□□□□ -1.84
TRS20YBR254C YPL108WQ02872 168 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 106.9 ms