RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	YHI9	P38765	294 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	SHU2	P38957	223 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	YHB1	P39676	399 aa	Known RBP	4.97	□□□□□ -1.61
ROT2	YBR229C	SNL1	P40548	159 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	MAF1	P41910	395 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	SET2	P46995	733 aa	Known RBP	4.97	□□□□□ -1.61
ROT2	YBR229C	TIF35	Q04067	274 aa	Known RBP	4.97	□□□□□ -1.61
ROT2	YBR229C	FAR10	Q06001	478 aa		4.97	□□□□□ -1.61
ROT2	YBR229C	CYS3	P31373	394 aa	Known RBP	4.96	□□□□□ -1.62
ROT2	YBR229C	AIM26	P32858	118 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	YKR015C	P36111	568 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	SLM4	P38247	162 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	PRM9	P39551	298 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	NOP9	P47077	666 aa	Known RBP	4.96	□□□□□ -1.62
ROT2	YBR229C	MET14	Q02196	202 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	MSC2	Q03455	724 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	YMR155W	Q03795	547 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	GLO2	Q05584	274 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	JIP5	Q06214	492 aa	Predicted RBP	4.96	□□□□□ -1.62
ROT2	YBR229C	GGA1	Q06336	557 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	NSE1	Q07913	336 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	ADE4	P04046	510 aa	Known RBP	4.96	□□□□□ -1.62
ROT2	YBR229C	TPK1	P06244	397 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	ATP12	P22135	325 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	GAC1	P28006	793 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	YHR182W	P38870	785 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	MEF2	P39677	819 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	MXR1	P40029	184 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	FMP32	P43557	207 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	DCP2	P53550	970 aa	Known RBP	4.96	□□□□□ -1.62
ROT2	YBR229C	ASI2	P53895	289 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	ASI1	P54074	624 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	TMA20	P89886	181 aa	Predicted RBP	4.96	□□□□□ -1.62
ROT2	YBR229C	HDA3	Q06623	655 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	CDA1	Q06702	301 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	YPR097W	Q06839	1073 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	AAD4	Q07747	329 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	RCL1	Q08096	367 aa	Predicted RBP	4.96	□□□□□ -1.62
ROT2	YBR229C	YOL019W	Q08157	551 aa		4.96	□□□□□ -1.62
ROT2	YBR229C	CHS5	Q12114	671 aa	Known RBP	4.96	□□□□□ -1.62
ROT2	YBR229C	ATP6	P00854	259 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	SEC63	P14906	663 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
ROT2	YBR229C	CCR4	P31384	837 aa	Known RBP	4.95	□□□□□ -1.62
ROT2	YBR229C	NDI1	P32340	513 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	HSP78	P33416	811 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	LHS1	P36016	881 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	YBR053C	P38235	358 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	FSH1	P38777	243 aa	Known RBP	4.95	□□□□□ -1.62
ROT2	YBR229C	LAM1	P38851	1228 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	UTP9	P38882	575 aa	Known RBP	4.95	□□□□□ -1.62
ROT2	YBR229C	ATM1	P40416	690 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	KTR6	P54070	446 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	DOS2	P54858	310 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	NHX1	Q04121	633 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	AIM32	Q04689	311 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	DYN3	Q04949	312 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	GRX8	Q05926	109 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	PUS5	Q06244	254 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	NHA1	Q99271	985 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	PHO87	P25360	923 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	CSM1	P25651	190 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	ATP7	P30902	174 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	RAD16	P31244	790 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	MNN1	P39106	762 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	HPM1	P40481	377 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	YIL089W	P40500	205 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	CAB2	P40506	365 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	ALT2	P52892	507 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	GET1	P53192	235 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	SLM2	P53955	656 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	RLI1	Q03195	608 aa	Known RBP	4.95	□□□□□ -1.62
ROT2	YBR229C	YDR179W-A	Q03983	463 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	DNL4	Q08387	944 aa	Predicted RBP	4.95	□□□□□ -1.62
ROT2	YBR229C	ATG34	Q12292	412 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	LDB17	Q12342	491 aa		4.95	□□□□□ -1.62
ROT2	YBR229C	SEC15	P22224	910 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	MRP8	P35719	219 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	GPT2	P36148	743 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	MRPL7	P36519	292 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	SHE3	P38272	425 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	NPT1	P39683	429 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	YJR061W	P40355	935 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	MPH1	P40562	993 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	ARC35	P53731	342 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	INA17	Q02888	182 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	VIK1	Q12045	647 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	CMR1	Q12510	522 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	MST1	P07236	462 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	VRP1	P37370	817 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	GRS1	P38088	690 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	RAD55	P38953	406 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	PIK1	P39104	1066 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	NUP60	P39705	539 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	YEL028W	P39989	153 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	MGS1	P40151	587 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	RSC8	P43609	557 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	YNL115C	P53925	644 aa		4.94	□□□□□ -1.62
ROT2	YBR229C	YNL010W	P53981	241 aa	Known RBP	4.94	□□□□□ -1.62
ROT2	YBR229C	NAN1	Q02931	896 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms