RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	HPF1	Q05164	967 aa		5.91	□□□□□ -1.46
ATG12	YBR217W	HEL2	Q05580	639 aa	Known RBP	5.91	□□□□□ -1.46
ATG12	YBR217W	JIP5	Q06214	492 aa	Predicted RBP	5.91	□□□□□ -1.46
ATG12	YBR217W	CMS1	Q07897	291 aa	Known RBP	5.91	□□□□□ -1.46
ATG12	YBR217W	APL5	Q08951	932 aa	Known RBP	5.91	□□□□□ -1.46
ATG12	YBR217W	AVL9	Q12500	764 aa		5.91	□□□□□ -1.46
ATG12	YBR217W	SCH9	P11792	824 aa	Known RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	AAT2	P23542	418 aa	Known RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	MNE1	P24720	663 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	PMI40	P29952	429 aa	Known RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	CCR4	P31384	837 aa	Known RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	PYC2	P32327	1180 aa	Known RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	VHC1	P38329	1120 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	YHL041W	P38730	149 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	CSN12	P47130	423 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	YJR124C	P47159	448 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	COG7	P53195	279 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	IPI3	P53877	555 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	TEP1	P53916	434 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	VAC7	P53950	1165 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	RPL34A	P87262	121 aa	Predicted RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	UTP6	Q02354	440 aa	Known RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	SLU7	Q02775	382 aa	Known RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	RPC11	Q04307	110 aa	Predicted RBP	5.9	□□□□□ -1.46
ATG12	YBR217W	YPR114W	Q06107	315 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	TRE2	Q08693	809 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	ACM1	Q08981	209 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	SFI1	Q12369	946 aa		5.9	□□□□□ -1.46
ATG12	YBR217W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
ATG12	YBR217W	PMA2	P19657	947 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	GCG1	P32656	232 aa	Known RBP	5.89	□□□□□ -1.47
ATG12	YBR217W	DCW1	P36091	449 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	TFA2	P36145	328 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	ECM2	P38241	364 aa	Known RBP	5.89	□□□□□ -1.47
ATG12	YBR217W	POP4	P38336	279 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	YHR078W	P38799	552 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	SLX8	P40072	274 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	YJR061W	P40355	935 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	IST3	P40565	148 aa	Predicted RBP	5.89	□□□□□ -1.47
ATG12	YBR217W	MAD1	P40957	749 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	GLG2	P47011	380 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	NUP84	P52891	726 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	STR3	P53101	465 aa	Known RBP	5.89	□□□□□ -1.47
ATG12	YBR217W	YGL140C	P53120	1219 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	YNL035C	P53962	389 aa	Known RBP	5.89	□□□□□ -1.47
ATG12	YBR217W	SIW14	P53965	281 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	CDC14	Q00684	551 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	CLU1	Q03690	1277 aa	Known RBP	5.89	□□□□□ -1.47
ATG12	YBR217W	YMR160W	Q03823	816 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	VTI1	Q04338	217 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	LDB18	Q07887	179 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	BMT6	Q12291	365 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	LDB17	Q12342	491 aa		5.89	□□□□□ -1.47
ATG12	YBR217W	QCR6	P00127	147 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	MPH2	P0CD99	609 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	PRP9	P19736	530 aa	Known RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	CLN1	P20437	546 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	DCC1	P25559	380 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	GID7	P25569	745 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	MGT1	P26188	188 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	SCD5	P34758	872 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	KES1	P35844	434 aa	Known RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	BYE1	P36106	594 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	IRS4	P36115	615 aa	Known RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	SMF2	P38778	549 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	BAT1	P38891	393 aa	Known RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	TIF11	P38912	153 aa	Known RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	PCF11	P39081	626 aa	Predicted RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	TES1	P41903	349 aa	Known RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	NMD5	P46970	1048 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	IML2	P47031	731 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	TAH11	P47112	604 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	YPR003C	P53394	754 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	RSC4	Q02206	625 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	RLI1	Q03195	608 aa	Known RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	YMR178W	Q03219	274 aa	Known RBP	5.88	□□□□□ -1.47
ATG12	YBR217W	ESC2	Q06340	456 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	OPI10	Q08202	246 aa		5.88	□□□□□ -1.47
ATG12	YBR217W	ERR1	P0CX10	437 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	ERR2	P0CX11	437 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	CBF1	P17106	351 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	TSR4	P25040	408 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	DPB3	P27344	201 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	BRF1	P29056	596 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	NDI1	P32340	513 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	PMT1	P33775	817 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	SRX1	P36077	127 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	WSC4	P38739	605 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	CCT4	P39078	528 aa	Known RBP	5.87	□□□□□ -1.47
ATG12	YBR217W	SCC4	P40090	624 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	ERR3	P42222	437 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	YNL320W	P42840	284 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	BUD13	P46947	266 aa	Predicted RBP	5.87	□□□□□ -1.47
ATG12	YBR217W	SIP4	P46954	829 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	DAN4	P47179	1161 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	SAP4	P53036	818 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	CDC73	Q06697	393 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	SAM4	Q08985	325 aa	Known RBP	5.87	□□□□□ -1.47
ATG12	YBR217W	GNT1	Q12096	491 aa		5.87	□□□□□ -1.47
ATG12	YBR217W	Q0182	Q9ZZW1	134 aa		5.87	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms