RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PIK3C2GO75747 1445 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 KIF16BQ96L93 1317 aa4.96□□□□□ -1.62
HMGB1P50-201ENST00000605814 KANK1Q14678 1352 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 CTIFO43310 598 aaKnown RBP4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 NFICP08651 508 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 MAOBP27338 520 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 ADMP35318 185 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 PCDH1Q08174 1060 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 HDAC1Q13547 482 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 POU4F3Q15319 338 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 PKN1Q16512 942 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 PIBF1Q8WXW3 757 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 CLEC4MQ9H2X3 399 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 CHMP4BQ9H444 224 aaKnown RBP4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 CWC22Q9HCG8 908 aaKnown RBP4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 LATS2Q9NRM7 1088 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 SERPINA10Q9UK55 444 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 SLC5A6Q9Y289 635 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 DAGLAQ9Y4D2 1042 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 ACTL7BQ9Y614 415 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 MORC2Q9Y6X9 1032 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 ABCC5O15440 1437 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 PTPRGP23470 1445 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 DAPK1P53355 1430 aa4.95□□□□□ -1.62
HMGB1P50-201ENST00000605814 ADGRL2O95490 1459 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 METTL12A8MUP2 240 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 BAG4O95429 457 aaKnown RBP4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 DLGAP3O95886 979 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 ABL1P00519 1130 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 TPM3P06753 285 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 C8AP07357 584 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 SLFN14P0C7P3 912 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 ASPAP45381 313 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 XPCQ01831 940 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 KIAA2012Q0VF49 1180 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 MTMR3Q13615 1198 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 ATP2B3Q16720 1220 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 LRSAM1Q6UWE0 723 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 ARHGAP27Q6ZUM4 889 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 ZNF765Q7L2R6 523 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 SHISA5Q8N114 240 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 STK11IPQ8N1F8 1099 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 EZH1Q92800 747 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 LIN7BQ9HAP6 207 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 DIAPH3Q9NSV4 1193 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 LMBRD1Q9NUN5 540 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 FAM53CQ9NYF3 392 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 CALCOCO1Q9P1Z2 691 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 ZC3H7BQ9UGR2 993 aaKnown RBP4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 KIF3AQ9Y496 699 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 DDX49Q9Y6V7 483 aaKnown RBP4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 RAD50Q92878 1312 aa4.94□□□□□ -1.62
HMGB1P50-201ENST00000605814 KDM5DQ9BY66 1539 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 A0A096LPE4 126 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 A0A1W2PPZ6 126 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 POLR3DP05423 398 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 CT47B1P0C2W7 299 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 SRPK2P78362 688 aaKnown RBP4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 JAG1P78504 1218 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 CBX1P83916 185 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 NOLC1Q14978 699 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 ZSCAN23Q3MJ62 389 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 CYP27C1Q4G0S4 372 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 DNTTIP2Q5QJE6 756 aaKnown RBP4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 CEP170Q5SW79 1584 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 POU5F2Q8N7G0 328 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 FAM184AQ8NB25 1140 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 RGS22Q8NE09 1264 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 TIGD1Q96MW7 591 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 PIDD1Q9HB75 910 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 LGR6Q9HBX8 967 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 PRDM10Q9NQV6 1147 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 GEMIN8Q9NWZ8 242 aaKnown RBP4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 CFAP65Q6ZU64 1925 aaKnown RBP4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 GRIN2AQ12879 1464 aa4.93□□□□□ -1.62
HMGB1P50-201ENST00000605814 ABCA10Q8WWZ4 1543 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 BCAR3O75815 825 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 PPP2R1AP30153 589 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 WDR43Q15061 677 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 CBLL1Q75N03 491 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 WDR63Q8IWG1 891 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 TESK2Q96S53 571 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 KIF2CQ99661 725 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 SEMA6CQ9H3T2 930 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 PANK3Q9H999 370 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 PAK6Q9NQU5 681 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 FAM105AQ9NUU6 356 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 SLAIN2Q9P270 581 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 BCCIPQ9P287 314 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 DDX41Q9UJV9 622 aaKnown RBP4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 TRPM1Q7Z4N2 1603 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 SCAF11Q99590 1463 aaKnown RBP4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 ADGBQ8N7X0 1667 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 MAGI3Q5TCQ9 1506 aa4.92□□□□□ -1.62
HMGB1P50-201ENST00000605814 REREQ9P2R6 1566 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 NUP160Q12769 1436 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 CLGNO14967 610 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 MBD3O95983 291 aa4.91□□□□□ -1.62
HMGB1P50-201ENST00000605814 ITGB5P18084 799 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms