RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 FLT1P17948 1338 aa18.25■□□□□ 0.51
SF3A2-206ENST00000592314 GDF11O95390 407 aa18.25■□□□□ 0.51
SF3A2-206ENST00000592314 LDHCP07864 332 aa18.25■□□□□ 0.51
SF3A2-206ENST00000592314 BACE1P56817 501 aa18.25■□□□□ 0.51
SF3A2-206ENST00000592314 PABPC4Q13310 644 aaKnown RBP eCLIP18.25■□□□□ 0.51
SF3A2-206ENST00000592314 PORCNQ9H237 461 aa18.25■□□□□ 0.51
SF3A2-206ENST00000592314 C11orf49Q9H6J7 331 aa18.25■□□□□ 0.51
SF3A2-206ENST00000592314 SNRKQ9NRH2 765 aa18.25■□□□□ 0.51
SF3A2-206ENST00000592314 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
SF3A2-206ENST00000592314 GNAI3P08754 354 aa18.24■□□□□ 0.51
SF3A2-206ENST00000592314 HOXA7P31268 230 aaPredicted RBP18.24■□□□□ 0.51
SF3A2-206ENST00000592314 HERVK_113P62684 666 aa18.24■□□□□ 0.51
SF3A2-206ENST00000592314 CCL14Q16627 93 aa18.24■□□□□ 0.51
SF3A2-206ENST00000592314 METTL16Q86W50 562 aaKnown RBP18.24■□□□□ 0.51
SF3A2-206ENST00000592314 MAPKAPK5Q8IW41 473 aa18.24■□□□□ 0.51
SF3A2-206ENST00000592314 USP6NLQ92738 828 aa18.24■□□□□ 0.51
SF3A2-206ENST00000592314 RBPJLQ9UBG7 517 aa18.24■□□□□ 0.51
SF3A2-206ENST00000592314 COL6A1P12109 1028 aa18.23■□□□□ 0.51
SF3A2-206ENST00000592314 IRX3P78415 501 aaPredicted RBP18.23■□□□□ 0.51
SF3A2-206ENST00000592314 Q3C1V9 767 aa18.23■□□□□ 0.51
SF3A2-206ENST00000592314 GORABQ5T7V8 394 aa18.23■□□□□ 0.51
SF3A2-206ENST00000592314 TGFBRAP1Q8WUH2 860 aa18.23■□□□□ 0.51
SF3A2-206ENST00000592314 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
SF3A2-206ENST00000592314 LRP2BPQ9P2M1 347 aa18.23■□□□□ 0.51
SF3A2-206ENST00000592314 PI4KBQ9UBF8 816 aa18.23■□□□□ 0.51
SF3A2-206ENST00000592314 HDAC5Q9UQL6 1122 aa18.23■□□□□ 0.51
SF3A2-206ENST00000592314 CYP2E1P05181 493 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-206ENST00000592314 TRIM27P14373 513 aa18.22■□□□□ 0.51
SF3A2-206ENST00000592314 CCND3P30281 292 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-206ENST00000592314 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-206ENST00000592314 LHX8Q68G74 356 aa18.22■□□□□ 0.51
SF3A2-206ENST00000592314 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
SF3A2-206ENST00000592314 ZBTB21Q9ULJ3 1066 aa18.22■□□□□ 0.51
SF3A2-206ENST00000592314 LTBP2Q14767 1821 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 ASNSP08243 561 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 XRCC5P13010 732 aaKnown RBP18.21■□□□□ 0.51
SF3A2-206ENST00000592314 ERVK-9P63128 1117 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 ERVK-24P63145 666 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 LRIT3Q3SXY7 679 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 MORN1Q5T089 497 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 NAA16Q6N069 864 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-206ENST00000592314 DEFB123Q8N688 67 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 SOCS4Q8WXH5 440 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 DBNDD2Q9BQY9 259 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 DHX36Q9H2U1 1008 aaKnown RBP18.21■□□□□ 0.51
SF3A2-206ENST00000592314 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
SF3A2-206ENST00000592314 CNMDO75829 334 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 PPP4CP60510 307 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 DYNLL1P63167 89 aaKnown RBP18.2■□□□□ 0.5
SF3A2-206ENST00000592314 LRRC26Q2I0M4 334 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 GPR153Q6NV75 609 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 TDHQ8IZJ6 230 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 GPRC5AQ8NFJ5 357 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 NUDT12Q9BQG2 462 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 PAGR1Q9BTK6 254 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 PIH1D3Q9NQM4 214 aaKnown RBP18.2■□□□□ 0.5
SF3A2-206ENST00000592314 TMOD4Q9NZQ9 345 aa18.2■□□□□ 0.5
SF3A2-206ENST00000592314 SAP30BPQ9UHR5 308 aaKnown RBP18.2■□□□□ 0.5
SF3A2-206ENST00000592314 USP17L10C9JJH3 530 aa18.19■□□□□ 0.5
SF3A2-206ENST00000592314 GNAI2P04899 355 aa18.19■□□□□ 0.5
SF3A2-206ENST00000592314 UQCRFS1P1P0C7P4 283 aa18.19■□□□□ 0.5
SF3A2-206ENST00000592314 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
SF3A2-206ENST00000592314 TNNI3KQ59H18 835 aa18.19■□□□□ 0.5
SF3A2-206ENST00000592314 GPR142Q7Z601 462 aa18.19■□□□□ 0.5
SF3A2-206ENST00000592314 FLRT1Q9NZU1 646 aa18.19■□□□□ 0.5
SF3A2-206ENST00000592314 FPGT-TNNI3KV9GXZ4 949 aa18.19■□□□□ 0.5
SF3A2-206ENST00000592314 NAV1Q8NEY1 1877 aa18.18■□□□□ 0.5
SF3A2-206ENST00000592314 MAPK4P31152 587 aa18.18■□□□□ 0.5
SF3A2-206ENST00000592314 POLA2Q14181 598 aa18.18■□□□□ 0.5
SF3A2-206ENST00000592314 MTMR10Q9NXD2 777 aa18.18■□□□□ 0.5
SF3A2-206ENST00000592314 TLR7Q9NYK1 1049 aaKnown RBP18.18■□□□□ 0.5
SF3A2-206ENST00000592314 RLFQ13129 1914 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 C19orf81C9J6K1 198 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 BCAR3O75815 825 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 ZAP70P43403 619 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 HNRNPUQ00839 825 aaKnown RBP eCLIP18.17■□□□□ 0.5
SF3A2-206ENST00000592314 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
SF3A2-206ENST00000592314 TTC39AQ5SRH9 613 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 CRACR2BQ8N4Y2 399 aaPredicted RBP18.17■□□□□ 0.5
SF3A2-206ENST00000592314 CLUAP1Q96AJ1 413 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 APBA2Q99767 749 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 NOL10Q9BSC4 688 aaKnown RBP18.17■□□□□ 0.5
SF3A2-206ENST00000592314 UBE2OQ9C0C9 1292 aaKnown RBP18.17■□□□□ 0.5
SF3A2-206ENST00000592314 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 A0A0G2JMZ2 1700 aa18.17■□□□□ 0.5
SF3A2-206ENST00000592314 BAG3O95817 575 aa18.16■□□□□ 0.5
SF3A2-206ENST00000592314 GH2P01242 217 aa18.16■□□□□ 0.5
SF3A2-206ENST00000592314 PLCG2P16885 1265 aa18.16■□□□□ 0.5
SF3A2-206ENST00000592314 PDE3AQ14432 1141 aa18.16■□□□□ 0.5
SF3A2-206ENST00000592314 ZYXQ15942 572 aaKnown RBP18.16■□□□□ 0.5
SF3A2-206ENST00000592314 ZNF236Q9UL36 1845 aa18.16■□□□□ 0.5
SF3A2-206ENST00000592314 RGS2P41220 211 aa18.15■□□□□ 0.5
SF3A2-206ENST00000592314 MDM2Q00987 491 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-206ENST00000592314 ATF7IPQ6VMQ6 1270 aa18.15■□□□□ 0.5
SF3A2-206ENST00000592314 PLEKHH3Q7Z736 793 aa18.15■□□□□ 0.5
SF3A2-206ENST00000592314 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-206ENST00000592314 C12orf42Q96LP6 360 aa18.15■□□□□ 0.5
SF3A2-206ENST00000592314 GPR108Q9NPR9 543 aa18.15■□□□□ 0.5
SF3A2-206ENST00000592314 DBNLQ9UJU6 430 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms