RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 TTC31Q49AM3 519 aaPredicted RBP11.97□□□□□ -0.49
RNF43-207ENST00000583753 RILPL1Q5EBL4 403 aa11.97□□□□□ -0.49
RNF43-207ENST00000583753 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
RNF43-207ENST00000583753 ATG9AQ7Z3C6 839 aa11.97□□□□□ -0.49
RNF43-207ENST00000583753 SRGAP1Q7Z6B7 1085 aa11.97□□□□□ -0.49
RNF43-207ENST00000583753 ANKRD13CQ8N6S4 541 aa11.97□□□□□ -0.49
RNF43-207ENST00000583753 ZCRB1Q8TBF4 217 aaKnown RBP11.97□□□□□ -0.49
RNF43-207ENST00000583753 GREM2Q9H772 168 aa11.97□□□□□ -0.49
RNF43-207ENST00000583753 ZMYM6O95789 1325 aa11.96□□□□□ -0.49
RNF43-207ENST00000583753 ANTXR2P58335 489 aa11.96□□□□□ -0.49
RNF43-207ENST00000583753 REXO1L1PQ8IX06 675 aa11.96□□□□□ -0.49
RNF43-207ENST00000583753 FAM204AQ9H8W3 233 aa11.96□□□□□ -0.49
RNF43-207ENST00000583753 HDAC6Q9UBN7 1215 aa11.96□□□□□ -0.49
RNF43-207ENST00000583753 LUC7L2Q9Y383 392 aaKnown RBP11.96□□□□□ -0.49
RNF43-207ENST00000583753 DIP2CQ9Y2E4 1556 aa11.96□□□□□ -0.49
RNF43-207ENST00000583753 SIGLEC1Q9BZZ2 1709 aa11.96□□□□□ -0.49
RNF43-207ENST00000583753 CLSTN1O94985 981 aa11.96□□□□□ -0.5
RNF43-207ENST00000583753 SLC5A1P13866 664 aa11.96□□□□□ -0.5
RNF43-207ENST00000583753 RFX5P48382 616 aaPredicted RBP11.96□□□□□ -0.5
RNF43-207ENST00000583753 TTF1Q15361 905 aaPredicted RBP11.96□□□□□ -0.5
RNF43-207ENST00000583753 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.5
RNF43-207ENST00000583753 IQCA1Q86XH1 822 aa11.96□□□□□ -0.5
RNF43-207ENST00000583753 CDC23Q9UJX2 597 aa11.96□□□□□ -0.5
RNF43-207ENST00000583753 AKR1B10O60218 316 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 KIAA0754O94854 1291 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 STARD3NLO95772 234 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 E2F4Q16254 413 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 CNGA4Q8IV77 575 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 RIN2Q8WYP3 895 aaPredicted RBP11.95□□□□□ -0.5
RNF43-207ENST00000583753 SYMPKQ92797 1274 aaKnown RBP11.95□□□□□ -0.5
RNF43-207ENST00000583753 L2HGDHQ9H9P8 463 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 PIH1D3Q9NQM4 214 aaKnown RBP11.95□□□□□ -0.5
RNF43-207ENST00000583753 IFT172Q9UG01 1749 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 TBC1D8O95759 1140 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 PIP4K2BP78356 416 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 MAP9Q49MG5 647 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 IFT81Q8WYA0 676 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 IVLP07476 585 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 MCAMP43121 646 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 LIG3P49916 1009 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 ODF2Q5BJF6 829 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
RNF43-207ENST00000583753 IFNL3Q8IZI9 196 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 KRT23Q9C075 422 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 ALDH8A1Q9H2A2 487 aaPredicted RBP11.95□□□□□ -0.5
RNF43-207ENST00000583753 MMRN2Q9H8L6 949 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 DLC1Q96QB1 1528 aa11.95□□□□□ -0.5
RNF43-207ENST00000583753 CCDC194A0A1B0GVG4 234 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 CYP27B1O15528 508 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 MB21D2Q8IYB1 491 aaPredicted RBP11.94□□□□□ -0.5
RNF43-207ENST00000583753 AFAP1L1Q8TED9 768 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 CTAGE1Q96RT6 745 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 TRIM10Q9UDY6 481 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 ACTN2P35609 894 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 KRT2P35908 639 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 NBPF14Q5TI25 921 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 NBPF10Q6P3W6 841 aaKnown RBP11.94□□□□□ -0.5
RNF43-207ENST00000583753 RAD9BQ6WBX8 426 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 NBPF15Q8N660 670 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 NELFBQ8WX92 580 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 CDK5RAP3Q96JB5 506 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.94□□□□□ -0.52e-8■■□□□ 14
RNF43-207ENST00000583753 TMEM131LA2VDJ0 1609 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 NEDD4P46934 1319 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 TSPY2A6NKD2 308 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 SH2B2O14492 632 aaPredicted RBP11.94□□□□□ -0.5
RNF43-207ENST00000583753 IGHMBP2P38935 993 aaKnown RBP11.94□□□□□ -0.5
RNF43-207ENST00000583753 USP5P45974 858 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 ATP2B2Q01814 1243 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 CYP27A1Q02318 531 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 HLTFQ14527 1009 aaKnown RBP eCLIP11.94□□□□□ -0.5
RNF43-207ENST00000583753 FAM47AQ5JRC9 791 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 SND1Q7KZF4 910 aaKnown RBP eCLIP11.94□□□□□ -0.5
RNF43-207ENST00000583753 CACNA2D4Q7Z3S7 1137 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
RNF43-207ENST00000583753 DEXIO95424 95 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 EPS15P42566 896 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 VSNL1P62760 191 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 FOXO4P98177 505 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 CASP8Q14790 479 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 BRD3Q15059 726 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 TRIM65Q6PJ69 517 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 ZNF654Q8IZM8 581 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 TC2NQ8N9U0 490 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 RASGRP4Q8TDF6 673 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 LCMT1Q9UIC8 334 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 MYO6Q9UM54 1294 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 STX8Q9UNK0 236 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 H3BQF6 201 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 CXCR5P32302 372 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 BCAMP50895 628 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 ATP1A2P50993 1020 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 PLCD1P51178 756 aa11.93□□□□□ -0.5
RNF43-207ENST00000583753 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms