RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 COL6A1P12109 1028 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 ERVK-9P63128 1117 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 ERVK-24P63145 666 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
PFDN5-212ENST00000550880 SLFN5Q08AF3 891 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 RRP1BQ14684 758 aaKnown RBP13.63□□□□□ -0.23
PFDN5-212ENST00000550880 ATF7IPQ6VMQ6 1270 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 PLEKHH3Q7Z736 793 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 ZNF384Q8TF68 577 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 PRKAG2Q9UGJ0 569 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 DDX60LQ5H9U9 1706 aaKnown RBP13.63□□□□□ -0.23
PFDN5-212ENST00000550880 LOC285556D6RIA3 1793 aa13.63□□□□□ -0.23
PFDN5-212ENST00000550880 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
PFDN5-212ENST00000550880 CCNA1P78396 465 aa13.62□□□□□ -0.23
PFDN5-212ENST00000550880 LRRC26Q2I0M4 334 aa13.62□□□□□ -0.23
PFDN5-212ENST00000550880 MFSD14CQ5VZR4 134 aa13.62□□□□□ -0.23
PFDN5-212ENST00000550880 FAM109BQ6ICB4 259 aaPredicted RBP13.62□□□□□ -0.23
PFDN5-212ENST00000550880 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
PFDN5-212ENST00000550880 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
PFDN5-212ENST00000550880 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.62□□□□□ -0.23
PFDN5-212ENST00000550880 SH3RF3Q8TEJ3 882 aaPredicted RBP13.62□□□□□ -0.23
PFDN5-212ENST00000550880 APBA2Q99767 749 aa13.62□□□□□ -0.23
PFDN5-212ENST00000550880 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
PFDN5-212ENST00000550880 TXNRD2Q9NNW7 524 aa13.62□□□□□ -0.23
PFDN5-212ENST00000550880 RBPJLQ9UBG7 517 aa13.62□□□□□ -0.23
PFDN5-212ENST00000550880 HLA-DOAP06340 250 aa13.61□□□□□ -0.23
PFDN5-212ENST00000550880 ARID4AP29374 1257 aaPredicted RBP13.61□□□□□ -0.23
PFDN5-212ENST00000550880 CCND3P30281 292 aaPredicted RBP13.61□□□□□ -0.23
PFDN5-212ENST00000550880 G3BP1Q13283 466 aaKnown RBP eCLIP13.61□□□□□ -0.23
PFDN5-212ENST00000550880 LHX8Q68G74 356 aa13.61□□□□□ -0.23
PFDN5-212ENST00000550880 USP17L2Q6R6M4 530 aa13.61□□□□□ -0.23
PFDN5-212ENST00000550880 PI16Q6UXB8 463 aa13.61□□□□□ -0.23
PFDN5-212ENST00000550880 EDC3Q96F86 508 aaKnown RBP13.61□□□□□ -0.23
PFDN5-212ENST00000550880 MEIS3Q99687 375 aa13.61□□□□□ -0.23
PFDN5-212ENST00000550880 SENP6Q9GZR1 1112 aaPredicted RBP13.61□□□□□ -0.23
PFDN5-212ENST00000550880 AATFQ9NY61 560 aaKnown RBP eCLIP13.61□□□□□ -0.23
PFDN5-212ENST00000550880 MSCO60682 206 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 MAP2K5Q13163 448 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 Q3C1V9 767 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 MORN1Q5T089 497 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 TGFBRAP1Q8WUH2 860 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 USP6NLQ92738 828 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 COL25A1Q9BXS0 654 aaPredicted RBP13.6□□□□□ -0.23
PFDN5-212ENST00000550880 PORCNQ9H237 461 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 ZBTB21Q9ULJ3 1066 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 CUL9Q8IWT3 2517 aa13.6□□□□□ -0.23
PFDN5-212ENST00000550880 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 PEX10O60683 326 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 GDF11O95390 407 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 CNGA1P29973 690 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 PPP4CP60510 307 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 ATP2B2Q01814 1243 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 MTX1Q13505 466 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 CCL14Q16627 93 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 CCDC158Q5M9N0 1113 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 ZNF697Q5TEC3 545 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 WDR78Q5VTH9 848 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 METTL16Q86W50 562 aaKnown RBP13.59□□□□□ -0.23
PFDN5-212ENST00000550880 FEZ1Q99689 392 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 RABGAP1Q9Y3P9 1069 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 IVNS1ABPQ9Y6Y0 642 aa13.59□□□□□ -0.23
PFDN5-212ENST00000550880 ATAD5Q96QE3 1844 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L15C9J2P7 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L13C9JLJ4 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L11C9JVI0 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L18D6R9N7 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L22D6RA61 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L17D6RBQ6 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L19D6RCP7 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L20D6RJB6 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 IGSF3O75054 1194 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 MCAMP43121 646 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP14P54578 494 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 USP17L24Q0WX57 530 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 FAM161BQ96MY7 647 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 EMILIN3Q9NT22 766 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
PFDN5-212ENST00000550880 PALD1Q9ULE6 856 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 FLT1P17948 1338 aa13.58□□□□□ -0.24
PFDN5-212ENST00000550880 SLC15A5A6NIM6 579 aa13.57□□□□□ -0.24
PFDN5-212ENST00000550880 ARHGAP45Q92619 1136 aa13.57□□□□□ -0.24
PFDN5-212ENST00000550880 LPAR1Q92633 364 aa13.57□□□□□ -0.24
PFDN5-212ENST00000550880 PLXNB2O15031 1838 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 DNM1LO00429 736 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 GH2P01242 217 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 GNAI2P04899 355 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 PTPREP23469 700 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 ATN1P54259 1190 aaPredicted RBP13.56□□□□□ -0.24
PFDN5-212ENST00000550880 JAG1P78504 1218 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 DNAJC18Q9H819 358 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 SNRKQ9NRH2 765 aa13.56□□□□□ -0.24
PFDN5-212ENST00000550880 SAP30BPQ9UHR5 308 aaKnown RBP13.56□□□□□ -0.24
PFDN5-212ENST00000550880 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms