RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 PPFIA4O75335 1185 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 RGS20O76081 388 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 ARAFP10398 606 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 NME1P15531 152 aaKnown RBP8.77□□□□□ -1.01
NPHP3-211ENST00000515289 RAB27AP51159 221 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 SIK1P57059 783 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 ATP11AP98196 1134 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 VPS72Q15906 364 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 KIAA1211LQ6NV74 962 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 ADAMTSL4Q6UY14 1074 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 DDX46Q7L014 1031 aaKnown RBP8.77□□□□□ -1.01
NPHP3-211ENST00000515289 PDZD3Q86UT5 571 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 CHPFQ8IZ52 775 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 PPM1KQ8N3J5 372 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 KLHL6Q8WZ60 621 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 CLUHP3Q96NS8 147 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 POP1Q99575 1024 aaKnown RBP8.77□□□□□ -1.01
NPHP3-211ENST00000515289 ZNF700Q9H0M5 742 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 TOR4AQ9NXH8 423 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 CACNA2D2Q9NY47 1150 aa8.77□□□□□ -1.01
NPHP3-211ENST00000515289 EHBP1L1Q8N3D4 1523 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 E2F8A0AVK6 867 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 DCDC2BA2VCK2 349 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 TTLL8A6PVC2 850 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 TNFRSF10CO14798 259 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 AKAP10O43572 662 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 TNP2Q05952 138 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 MAP7Q14244 749 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 LONRF3Q496Y0 759 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 OVOS1Q6IE37 1185 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 NLRC3Q7RTR2 1065 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 ATG4CQ96DT6 458 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 CDC6Q99741 560 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 STRN4Q9NRL3 753 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 ZIM2Q9NZV7 527 aa8.76□□□□□ -1.01
NPHP3-211ENST00000515289 EPRSP07814 1512 aaKnown RBP8.75□□□□□ -1.01
NPHP3-211ENST00000515289 GFRA2O00451 464 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 CAPN5O15484 640 aaPredicted RBP8.75□□□□□ -1.01
NPHP3-211ENST00000515289 SLC7A5Q01650 507 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 SAFB2Q14151 953 aaKnown RBP eCLIP8.75□□□□□ -1.01
NPHP3-211ENST00000515289 CNNM4Q6P4Q7 775 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 VN1R5Q7Z5H4 357 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 STRA8Q7Z7C7 330 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 C14orf80Q86SX3 495 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
NPHP3-211ENST00000515289 DDX1Q92499 740 aaKnown RBP8.75□□□□□ -1.01
NPHP3-211ENST00000515289 HPS1Q92902 700 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 BHMTQ93088 406 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 IPO9Q96P70 1041 aaKnown RBP8.75□□□□□ -1.01
NPHP3-211ENST00000515289 CAMKK2Q96RR4 588 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 CDH19Q9H159 772 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 CNNM2Q9H8M5 875 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 ARHGEF4Q9NR80 690 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 MARK1Q9P0L2 795 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 DACH1Q9UI36 760 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 PCDHB10Q9UN67 800 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 SOX13Q9UN79 622 aa8.75□□□□□ -1.01
NPHP3-211ENST00000515289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 TRBV23-1A0A0A0MS06 115 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 TRAV20A0A0B4J274 112 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 SMNDC1O75940 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 LDHAP00338 332 aaKnown RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 MAPTP10636 758 aaKnown RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 ZNF143P52747 638 aaPredicted RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 PIN1Q13526 163 aaPredicted RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 MTMR1Q13613 665 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 FAM209AQ5JX71 171 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 SYCP2LQ5T4T6 812 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 C6orf118Q5T5N4 469 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 CDCP2Q5VXM1 449 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 RNF219Q5W0B1 726 aaPredicted RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 AHI1Q8N157 1196 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 TTC8Q8TAM2 541 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 IL17RAQ96F46 866 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 GAS2L1Q99501 681 aaPredicted RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 MPHOSPH6Q99547 160 aaKnown RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 SLC30A3Q99726 388 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 BSDC1Q9NW68 430 aaPredicted RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 REV1Q9UBZ9 1251 aa8.74□□□□□ -1.01
NPHP3-211ENST00000515289 NUP153P49790 1475 aaKnown RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 CDK13Q14004 1512 aaKnown RBP8.74□□□□□ -1.01
NPHP3-211ENST00000515289 MTUS2Q5JR59 1369 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 A0A1W2PQU0 124 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 SLC22A31A6NKX4 558 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 J3QW42 95 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 NPTXRO95502 500 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 GHRHP01286 108 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 SELPP16109 830 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 SDSP20132 328 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 PAX3P23760 479 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 AP3B2Q13367 1082 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 BRD3Q15059 726 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 MAP1SQ66K74 1059 aaPredicted RBP8.73□□□□□ -1.01
NPHP3-211ENST00000515289 NXNQ6DKJ4 435 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 PPP4R4Q6NUP7 873 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 SCUBE1Q8IWY4 988 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 WDR66Q8TBY9 1149 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 SLC9A7Q96T83 725 aa8.73□□□□□ -1.01
NPHP3-211ENST00000515289 SLC5A4Q9NY91 659 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms