RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 TAF11Q15544 211 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 LDLRAD1Q5T700 205 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 TAS1R3Q7RTX0 852 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 CCDC24Q8N4L8 307 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 SUPT20HQ8NEM7 779 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 GIMAP1Q8WWP7 306 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 ZNF277Q9NRM2 450 aaPredicted RBP6.6□□□□□ -1.35
ITCH-201ENST00000262650 COMMD8Q9NX08 183 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 PAXBP1Q9Y5B6 917 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 SCN9AQ15858 1988 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 CCDC163A0A0D9SF12 145 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 PPEF1O14829 653 aaPredicted RBP6.6□□□□□ -1.35
ITCH-201ENST00000262650 HOXC13P31276 330 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 TMPOP42166 694 aaKnown RBP6.6□□□□□ -1.35
ITCH-201ENST00000262650 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
ITCH-201ENST00000262650 SH3D19Q5HYK7 790 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 CDC37L1Q7L3B6 337 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 ATRIPQ8WXE1 791 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 ARMC5Q96C12 935 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 VMP1Q96GC9 406 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 ISCA1Q9BUE6 129 aa6.6□□□□□ -1.35
ITCH-201ENST00000262650 POLR2AP24928 1970 aaKnown RBP6.59□□□□□ -1.35
ITCH-201ENST00000262650 TMEM110-MUSTN1A8MSY1 372 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 BOLA2-SMG1P6H3BVE0 249 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 ENPP1P22413 925 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 GPSM2P81274 684 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 RBL2Q08999 1139 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 SLFN5Q08AF3 891 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 CBLBQ13191 982 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 TOMM20Q15388 145 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 SF3B3Q15393 1217 aaKnown RBP6.59□□□□□ -1.35
ITCH-201ENST00000262650 C3orf67Q6ZVT6 689 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 HELQQ8TDG4 1101 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 FRAT1Q92837 279 aaPredicted RBP6.59□□□□□ -1.35
ITCH-201ENST00000262650 TMEM87BQ96K49 555 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 DDX21Q9NR30 783 aaKnown RBP eCLIP6.59□□□□□ -1.35
ITCH-201ENST00000262650 TRIM35Q9UPQ4 493 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 ABCC4O15439 1325 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 DNAJC6O75061 913 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 STIP1P31948 543 aaKnown RBP6.59□□□□□ -1.35
ITCH-201ENST00000262650 VEGFBP49765 207 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 TCIRG1Q13488 830 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 ALKBH2Q6NS38 261 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 NLRP10Q86W26 655 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 NELL1Q92832 810 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 JARID2Q92833 1246 aaPredicted RBP6.59□□□□□ -1.35
ITCH-201ENST00000262650 UTP14AQ9BVJ6 771 aaKnown RBP6.59□□□□□ -1.35
ITCH-201ENST00000262650 ENAMQ9NRM1 1142 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 MKS1Q9NXB0 559 aa6.59□□□□□ -1.35
ITCH-201ENST00000262650 A0A1W2PRQ8 180 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 MAGEA8P43361 318 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 TRAPPC10P48553 1259 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 CTCFP49711 727 aaPredicted RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 FXNQ16595 210 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 ANKRD45Q5TZF3 282 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 OLFM4Q6UX06 510 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 MPP4Q96JB8 637 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 MAP3K14Q99558 947 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 DHX36Q9H2U1 1008 aaKnown RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 MIS18AQ9NYP9 233 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 USP25Q9UHP3 1055 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 INTUQ9ULD6 942 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 TLL2Q9Y6L7 1015 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 MAPK8IP3Q9UPT6 1336 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 NPHP1O15259 732 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 RPL17P18621 184 aaKnown RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 GOLGA2Q08379 1002 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 INO80DQ53TQ3 878 aaPredicted RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 JAKMIP3Q5VZ66 844 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 NFXL1Q6ZNB6 911 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 USP48Q86UV5 1035 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 TNS4Q8IZW8 715 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 UHMK1Q8TAS1 419 aaKnown RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 NEK9Q8TD19 979 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 RPGRQ92834 1020 aaKnown RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 TBC1D20Q96BZ9 403 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 SERINC2Q96SA4 455 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 RWDD1Q9H446 243 aaPredicted RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 GPRC5DQ9NZD1 345 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 SPEF2Q9C093 1822 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 AKAP11Q9UKA4 1901 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 FOXN1O15353 648 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 HOXD10P28358 340 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 EIF6P56537 245 aaKnown RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 LMBRD2Q68DH5 695 aaPredicted RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 SAMD14Q8IZD0 417 aaPredicted RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 APPL2Q8NEU8 664 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 PLBD2Q8NHP8 589 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 XPO4Q9C0E2 1151 aaKnown RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 TSPYL1Q9H0U9 437 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 MED4Q9NPJ6 270 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 ADARB2Q9NS39 739 aaKnown RBP6.58□□□□□ -1.36
ITCH-201ENST00000262650 ZNRF3Q9ULT6 936 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 CHMP3Q9Y3E7 222 aa6.58□□□□□ -1.36
ITCH-201ENST00000262650 ARAP2Q8WZ64 1704 aa6.57□□□□□ -1.36
ITCH-201ENST00000262650 PLIN1O60240 522 aa6.57□□□□□ -1.36
ITCH-201ENST00000262650 ECEL1O95672 775 aa6.57□□□□□ -1.36
ITCH-201ENST00000262650 HSPA8P11142 646 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms