RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Dnajb2Q9QYI5 324 aa8.89□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Fam50bQ9WTJ8 334 aa8.89□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ttc21aQ8C0S4 1314 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Gm10471E9Q1C7 252 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Nfatc2ipO09130 412 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 PgfP49764 158 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 CastP51125 788 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Nub1P54729 614 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ksr2Q3UVC0 959 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Cyp2c67Q569X9 491 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Kcnt1Q6ZPR4 1224 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Amer1Q7TS75 1132 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Fbxo33Q8VE08 562 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Lce1mQ9CR91 182 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Fam83dQ9D7I8 585 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Trim39Q9ESN2 488 aa8.88□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Adcy1O88444 1118 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Hoxc9P09633 260 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Cnga1P29974 684 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ezh1P70351 747 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Gas2l2Q5SSG4 860 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Laptm4aQ60961 233 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 AgerQ62151 402 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Trim46Q7TNM2 759 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Slc7a6osQ7TPE5 306 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Prpf40bQ80W14 870 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Htatsf1Q8BGC0 757 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Rtp1Q8C8C1 263 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Btbd7Q8CFE5 1130 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Dbr1Q923B1 550 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Q9CYS6 286 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Speer4bQ9D9F7 267 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Tspoap1Q7TNF8 1846 aa8.87□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Neurod4O09105 330 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Pik3cdO35904 1043 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Apaf1O88879 1249 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Hoxb7P09024 217 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ceacam1P31809 521 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Mex3cQ05A36 652 aaKnown RBP8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Foxo6Q70KY4 559 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Trim56Q80VI1 734 aaKnown RBP8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 McamQ8R2Y2 648 aaKnown RBP8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Psmd2Q8VDM4 908 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Alg1Q921Q3 482 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ceacam2Q925P2 520 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Rgs19Q9CX84 216 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Swt1Q9DBQ9 907 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Zfp646Q6NV66 1788 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Simc1E9Q6E9 1354 aa8.86□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Cntnap5aQ0V8T9 1304 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Phlpp2Q8BXA7 1320 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Map7O88735 730 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Pax1P09084 446 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ppp1r15aP17564 657 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Epha1Q60750 977 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ppp1r1bQ60829 194 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 TrhQ62361 256 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Cavin2Q63918 418 aaKnown RBP8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Trim6Q8BGE7 488 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Fbxo18Q8K2I9 1042 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 ApobrQ8VBT6 942 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 4933402E13RikQ9D4D2 429 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Sart3Q9JLI8 962 aaKnown RBP8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Deaf1Q9Z1T5 566 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Adcy9P51830 1353 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Msh6P54276 1358 aaKnown RBP8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Col4a5Q63ZW6 1691 aa8.85□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Gm13023A2A8N2 498 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Btnl6A2CG22 539 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Lrrc63A6H694 637 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Sec14l5B2RXM5 696 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Trim30dE9PWL0 497 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ncam1P13595 1115 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Nedd4P46935 887 aaKnown RBP8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Pbxip1Q3TVI8 727 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Dennd1bQ3U1T9 766 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Q4VA45 678 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Klhl23Q6GQU2 558 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 HelbQ6NVF4 1074 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Akr7a2Q8CG76 367 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Gpr153Q8K0Z9 631 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 CpzQ8R4V4 654 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Crb1Q8VHS2 1405 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ak5Q920P5 562 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Atxn3Q9CVD2 355 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Rfc5Q9D0F6 339 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 PrepQ9QUR6 710 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Adam11Q9R1V4 773 aa8.84□□□□□ -0.99
Ccdc47-202ENSMUST00000106865 Ric1Q69ZJ7 1422 aa8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Zfp605E9QAH2 694 aa8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Rabep1O35551 862 aa8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Hsp90ab1P11499 724 aaKnown RBP8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Samd11Q1RNF8 542 aa8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Srbd1Q497V5 1015 aaKnown RBP8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Ccnl1Q52KE7 532 aaKnown RBP8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Spred3Q6P6N5 408 aa8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 B4galnt4Q766D5 1034 aa8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Q922M7 232 aa8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Rbm33Q9CXK9 1231 aaKnown RBP8.83□□□□□ -1
Ccdc47-202ENSMUST00000106865 Wdr89Q9D0R9 386 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms