RNA–Protein interactions for RNA: ENSMUST00000212800.1

C78859-201, mousemouse

BASIC

Gene C78859, Length 5,943 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C78859-201ENSMUST00000212800 FryE9Q8I9 3020 aa4.74□□□□□ -1.65
C78859-201ENSMUST00000212800 VcanQ62059 3357 aa4.73□□□□□ -1.65
C78859-201ENSMUST00000212800 Ranbp2Q9ERU9 3053 aaKnown RBP4.72□□□□□ -1.65
C78859-201ENSMUST00000212800 Gm9507D3Z5T3 223 aa4.71□□□□□ -1.66
C78859-201ENSMUST00000212800 Gm21887J3QQ04 176 aa4.71□□□□□ -1.66
C78859-201ENSMUST00000212800 Myo15aQ9QZZ4 3511 aa4.7□□□□□ -1.66
C78859-201ENSMUST00000212800 SpegQ62407 3262 aa4.69□□□□□ -1.66
C78859-201ENSMUST00000212800 Pdzd2E9Q1M1 2796 aa4.68□□□□□ -1.66
C78859-201ENSMUST00000212800 FlncQ8VHX6 2726 aaKnown RBP4.68□□□□□ -1.66
C78859-201ENSMUST00000212800 Tnp1P10856 55 aa4.68□□□□□ -1.66
C78859-201ENSMUST00000212800 A930033H14RikG5E8X6 103 aa4.66□□□□□ -1.66
C78859-201ENSMUST00000212800 Gm9112A2AI92 75 aa4.65□□□□□ -1.66
C78859-201ENSMUST00000212800 Dmxl2Q8BPN8 3032 aa4.65□□□□□ -1.67
C78859-201ENSMUST00000212800 Vps13cQ8BX70 3748 aa4.64□□□□□ -1.67
C78859-201ENSMUST00000212800 NbeaQ9EPN1 2936 aa4.64□□□□□ -1.67
C78859-201ENSMUST00000212800 Krtap10-4Q08EG8 221 aa4.63□□□□□ -1.67
C78859-201ENSMUST00000212800 Celsr1O35161 3034 aa4.63□□□□□ -1.67
C78859-201ENSMUST00000212800 Zfhx4Q9JJN2 3550 aa4.63□□□□□ -1.67
C78859-201ENSMUST00000212800 DspE9Q557 2883 aaKnown RBP4.63□□□□□ -1.67
C78859-201ENSMUST00000212800 Gm20537G3UYK7 97 aa4.62□□□□□ -1.67
C78859-201ENSMUST00000212800 Gm884A2A9H6 3643 aa4.62□□□□□ -1.67
C78859-201ENSMUST00000212800 Celsr2Q9R0M0 2920 aa4.6□□□□□ -1.67
C78859-201ENSMUST00000212800 Zzef1Q5SSH7 2924 aa4.59□□□□□ -1.67
C78859-201ENSMUST00000212800 Tenm4Q3UHK6 2771 aa4.58□□□□□ -1.68
C78859-201ENSMUST00000212800 Celsr3Q91ZI0 3301 aa4.57□□□□□ -1.68
C78859-201ENSMUST00000212800 2310079G19RikQ9D6L6 185 aa4.57□□□□□ -1.68
C78859-201ENSMUST00000212800 Gm17416Q30KP4 66 aa4.57□□□□□ -1.68
C78859-201ENSMUST00000212800 Krtap10-10A0A1W2P7T6 217 aa4.56□□□□□ -1.68
C78859-201ENSMUST00000212800 Dchs1E9PVD3 3291 aa4.55□□□□□ -1.68
C78859-201ENSMUST00000212800 B930094E09RikQ8C4T2 136 aa4.55□□□□□ -1.68
C78859-201ENSMUST00000212800 RelnQ60841 3461 aa4.53□□□□□ -1.68
C78859-201ENSMUST00000212800 Gm5965D3Z724 196 aa4.53□□□□□ -1.68
C78859-201ENSMUST00000212800 Nf1Q04690 2841 aa4.52□□□□□ -1.69
C78859-201ENSMUST00000212800 Chd9Q8BYH8 2885 aa4.52□□□□□ -1.69
C78859-201ENSMUST00000212800 Tenm1Q9WTS4 2731 aa4.52□□□□□ -1.69
C78859-201ENSMUST00000212800 Trank1Q8BV79 2999 aa4.52□□□□□ -1.69
C78859-201ENSMUST00000212800 Gm17402F6Z0L5 76 aa4.5□□□□□ -1.69
C78859-201ENSMUST00000212800 Tenm3Q9WTS6 2715 aa4.5□□□□□ -1.69
C78859-201ENSMUST00000212800 Akap9Q70FJ1 3797 aa4.49□□□□□ -1.69
C78859-201ENSMUST00000212800 SpenQ62504 3644 aaKnown RBP4.49□□□□□ -1.69
C78859-201ENSMUST00000212800 Megf8P60882 2789 aa4.48□□□□□ -1.69
C78859-201ENSMUST00000212800 Muc5acE9QAQ8 3455 aa4.47□□□□□ -1.69
C78859-201ENSMUST00000212800 Adgrg4B7ZCC9 3073 aa4.47□□□□□ -1.69
C78859-201ENSMUST00000212800 Gm2696A0A1W2P709 240 aa4.47□□□□□ -1.69
C78859-201ENSMUST00000212800 2210017I01RikA0A0A6YVV1 95 aa4.45□□□□□ -1.7
C78859-201ENSMUST00000212800 LrbaQ9ESE1 2856 aa4.39□□□□□ -1.71
C78859-201ENSMUST00000212800 Lama5Q61001 3718 aa4.39□□□□□ -1.71
C78859-201ENSMUST00000212800 Helz2E9QAM5 2947 aaKnown RBP4.39□□□□□ -1.71
C78859-201ENSMUST00000212800 A0A1Y7VLE6 161 aa4.36□□□□□ -1.71
C78859-201ENSMUST00000212800 2310057N15RikQ9D6T8 200 aa4.36□□□□□ -1.71
C78859-201ENSMUST00000212800 Smg1Q8BKX6 3658 aaKnown RBP4.31□□□□□ -1.72
C78859-201ENSMUST00000212800 Tenm2Q9WTS5 2764 aa4.3□□□□□ -1.72
C78859-201ENSMUST00000212800 Cmya5Q70KF4 3739 aa4.24□□□□□ -1.73
C78859-201ENSMUST00000212800 Csmd1Q923L3 3564 aa4.24□□□□□ -1.73
C78859-201ENSMUST00000212800 Zfhx3Q61329 3726 aa4.24□□□□□ -1.73
C78859-201ENSMUST00000212800 Gm11939A2A592 99 aa4.22□□□□□ -1.73
C78859-201ENSMUST00000212800 OtogO55225 2910 aa4.22□□□□□ -1.73
C78859-201ENSMUST00000212800 LystP97412 3788 aa4.21□□□□□ -1.74
C78859-201ENSMUST00000212800 Prm2P07978 107 aa4.19□□□□□ -1.74
C78859-201ENSMUST00000212800 4933428G20RikQ9D3X4 101 aa4.18□□□□□ -1.74
C78859-201ENSMUST00000212800 Svep1A2AVA0 3567 aa4.17□□□□□ -1.74
C78859-201ENSMUST00000212800 Csmd2V9GX34 3611 aa4.16□□□□□ -1.74
C78859-201ENSMUST00000212800 Col7a1Q63870 2944 aa4.15□□□□□ -1.74
C78859-201ENSMUST00000212800 Ank2Q8C8R3 3898 aa4.15□□□□□ -1.75
C78859-201ENSMUST00000212800 Krtap3-2Q9D638 99 aa4.14□□□□□ -1.75
C78859-201ENSMUST00000212800 Krtap3-3Q9D7P0 99 aa4.14□□□□□ -1.75
C78859-201ENSMUST00000212800 Gm19668J3QMD1 248 aa4.14□□□□□ -1.75
C78859-201ENSMUST00000212800 VwfQ8CIZ8 2813 aa4.08□□□□□ -1.76
C78859-201ENSMUST00000212800 Gm9736A0A1W2P7N1 277 aa4.08□□□□□ -1.76
C78859-201ENSMUST00000212800 A0A1Y7VJH8 109 aa4.07□□□□□ -1.76
C78859-201ENSMUST00000212800 Krtap13-1Q8K198 168 aa4.07□□□□□ -1.76
C78859-201ENSMUST00000212800 Krtap3-1A2A591 98 aa4.06□□□□□ -1.76
C78859-201ENSMUST00000212800 Fbn1Q61554 2873 aaKnown RBP4.04□□□□□ -1.76
C78859-201ENSMUST00000212800 BsnO88737 3942 aa4.02□□□□□ -1.77
C78859-201ENSMUST00000212800 Krtap19-5O08632 62 aa4□□□□□ -1.77
C78859-201ENSMUST00000212800 Krtap28-10A0A1Y7VP58 119 aa3.99□□□□□ -1.77
C78859-201ENSMUST00000212800 Muc4Q8JZM8 3443 aa3.97□□□□□ -1.77
C78859-201ENSMUST00000212800 A030003K21RikA0A1Y7VIM3 128 aa3.96□□□□□ -1.78
C78859-201ENSMUST00000212800 CubnQ9JLB4 3623 aa3.94□□□□□ -1.78
C78859-201ENSMUST00000212800 Xirp2Q4U4S6 3784 aa3.93□□□□□ -1.78
C78859-201ENSMUST00000212800 Gm9918Q8BUR5 174 aa3.92□□□□□ -1.78
C78859-201ENSMUST00000212800 Krtap28-13A0A087WQP5 138 aa3.84□□□□□ -1.79
C78859-201ENSMUST00000212800 Sprr2a3Q4KL71 83 aa3.82□□□□□ -1.8
C78859-201ENSMUST00000212800 Sprr2a1Q9CQK8 83 aa3.82□□□□□ -1.8
C78859-201ENSMUST00000212800 Muc6Q80T03 2850 aa3.79□□□□□ -1.8
C78859-201ENSMUST00000212800 Krtap1-5A2A590 122 aa3.79□□□□□ -1.8
C78859-201ENSMUST00000212800 Krtap7-1Q9D3I6 87 aa3.77□□□□□ -1.81
C78859-201ENSMUST00000212800 A030005K14RikA0A1Y7VNY1 122 aa3.77□□□□□ -1.81
C78859-201ENSMUST00000212800 Hspg2Q05793 3707 aaKnown RBP3.75□□□□□ -1.81
C78859-201ENSMUST00000212800 Gm10318A0A1W2P728 225 aa3.74□□□□□ -1.81
C78859-201ENSMUST00000212800 Sprr2kO70562 68 aa3.74□□□□□ -1.81
C78859-201ENSMUST00000212800 Kmt2aP55200 3966 aa3.73□□□□□ -1.81
C78859-201ENSMUST00000212800 Gm6217A0A1Y7VJK9 128 aa3.72□□□□□ -1.81
C78859-201ENSMUST00000212800 Crct1Q6PAI5 102 aa3.72□□□□□ -1.81
C78859-201ENSMUST00000212800 Dnah14A0A140LIJ4 4489 aa3.7□□□□□ -1.82
C78859-201ENSMUST00000212800 Dnah3Q8BW94 4083 aa3.7□□□□□ -1.82
C78859-201ENSMUST00000212800 TnxbO35452 4006 aa3.69□□□□□ -1.82
C78859-201ENSMUST00000212800 A030005L19RikA0A1Y7VIU2 113 aa3.69□□□□□ -1.82
C78859-201ENSMUST00000212800 Dnah6E9Q0B6 4144 aa3.68□□□□□ -1.82
C78859-201ENSMUST00000212800 Krtap19-9aF8WH65 55 aa3.68□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 80.8 ms