RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Gm9112A2AI92 75 aa9□□□□□ -0.97
Shroom3-204ENSMUST00000168878 Tnp1P10856 55 aa8.99□□□□□ -0.97
Shroom3-204ENSMUST00000168878 Adgrg4B7ZCC9 3073 aa8.98□□□□□ -0.97
Shroom3-204ENSMUST00000168878 Zzef1Q5SSH7 2924 aa8.96□□□□□ -0.98
Shroom3-204ENSMUST00000168878 A930033H14RikG5E8X6 103 aa8.94□□□□□ -0.98
Shroom3-204ENSMUST00000168878 Celsr3Q91ZI0 3301 aa8.92□□□□□ -0.98
Shroom3-204ENSMUST00000168878 Wdfy4E9Q2M9 3149 aa8.9□□□□□ -0.98
Shroom3-204ENSMUST00000168878 Igfn1Q3KNY0 2849 aa8.89□□□□□ -0.99
Shroom3-204ENSMUST00000168878 FrylF8VQ05 3007 aa8.89□□□□□ -0.99
Shroom3-204ENSMUST00000168878 NbeaQ9EPN1 2936 aa8.89□□□□□ -0.99
Shroom3-204ENSMUST00000168878 2310079G19RikQ9D6L6 185 aa8.87□□□□□ -0.99
Shroom3-204ENSMUST00000168878 DspE9Q557 2883 aaKnown RBP8.85□□□□□ -0.99
Shroom3-204ENSMUST00000168878 2310057N15RikQ9D6T8 200 aa8.84□□□□□ -0.99
Shroom3-204ENSMUST00000168878 FryE9Q8I9 3020 aa8.84□□□□□ -0.99
Shroom3-204ENSMUST00000168878 B930094E09RikQ8C4T2 136 aa8.83□□□□□ -1
Shroom3-204ENSMUST00000168878 Dmxl2Q8BPN8 3032 aa8.81□□□□□ -1
Shroom3-204ENSMUST00000168878 FlncQ8VHX6 2726 aaKnown RBP8.81□□□□□ -1
Shroom3-204ENSMUST00000168878 Celsr2Q9R0M0 2920 aa8.8□□□□□ -1
Shroom3-204ENSMUST00000168878 Lama1P19137 3084 aa8.78□□□□□ -1
Shroom3-204ENSMUST00000168878 Pdzd2E9Q1M1 2796 aa8.76□□□□□ -1.01
Shroom3-204ENSMUST00000168878 Tenm4Q3UHK6 2771 aa8.74□□□□□ -1.01
Shroom3-204ENSMUST00000168878 Brca2P97929 3329 aa8.72□□□□□ -1.01
Shroom3-204ENSMUST00000168878 Tenm3Q9WTS6 2715 aa8.7□□□□□ -1.02
Shroom3-204ENSMUST00000168878 Gm17416Q30KP4 66 aa8.64□□□□□ -1.03
Shroom3-204ENSMUST00000168878 Chd9Q8BYH8 2885 aa8.64□□□□□ -1.03
Shroom3-204ENSMUST00000168878 Dchs2A0A0A6YW72 3346 aa8.63□□□□□ -1.03
Shroom3-204ENSMUST00000168878 Trank1Q8BV79 2999 aa8.58□□□□□ -1.04
Shroom3-204ENSMUST00000168878 Col6a3E9PWQ3 3284 aa8.55□□□□□ -1.04
Shroom3-204ENSMUST00000168878 Nf1Q04690 2841 aa8.54□□□□□ -1.04
Shroom3-204ENSMUST00000168878 Zfhx3Q61329 3726 aa8.52□□□□□ -1.04
Shroom3-204ENSMUST00000168878 LrbaQ9ESE1 2856 aa8.52□□□□□ -1.05
Shroom3-204ENSMUST00000168878 2210017I01RikA0A0A6YVV1 95 aa8.49□□□□□ -1.05
Shroom3-204ENSMUST00000168878 Gm17402F6Z0L5 76 aa8.46□□□□□ -1.06
Shroom3-204ENSMUST00000168878 VcanQ62059 3357 aa8.45□□□□□ -1.06
Shroom3-204ENSMUST00000168878 Tenm1Q9WTS4 2731 aa8.41□□□□□ -1.06
Shroom3-204ENSMUST00000168878 Helz2E9QAM5 2947 aaKnown RBP8.4□□□□□ -1.06
Shroom3-204ENSMUST00000168878 Gm9736A0A1W2P7N1 277 aa8.37□□□□□ -1.07
Shroom3-204ENSMUST00000168878 Dchs1E9PVD3 3291 aa8.36□□□□□ -1.07
Shroom3-204ENSMUST00000168878 Prm2P07978 107 aa8.33□□□□□ -1.08
Shroom3-204ENSMUST00000168878 Wdfy3Q6VNB8 3508 aa8.32□□□□□ -1.08
Shroom3-204ENSMUST00000168878 RelnQ60841 3461 aa8.28□□□□□ -1.08
Shroom3-204ENSMUST00000168878 Tenm2Q9WTS5 2764 aa8.28□□□□□ -1.08
Shroom3-204ENSMUST00000168878 Myo15aQ9QZZ4 3511 aa8.27□□□□□ -1.09
Shroom3-204ENSMUST00000168878 SpegQ62407 3262 aa8.25□□□□□ -1.09
Shroom3-204ENSMUST00000168878 Vps13cQ8BX70 3748 aa8.23□□□□□ -1.09
Shroom3-204ENSMUST00000168878 Gm11939A2A592 99 aa8.21□□□□□ -1.1
Shroom3-204ENSMUST00000168878 Akap9Q70FJ1 3797 aa8.16□□□□□ -1.1
Shroom3-204ENSMUST00000168878 Megf8P60882 2789 aa8.09□□□□□ -1.11
Shroom3-204ENSMUST00000168878 Gm19668J3QMD1 248 aa8.05□□□□□ -1.12
Shroom3-204ENSMUST00000168878 Muc5acE9QAQ8 3455 aa8.04□□□□□ -1.12
Shroom3-204ENSMUST00000168878 Gm9918Q8BUR5 174 aa8.02□□□□□ -1.13
Shroom3-204ENSMUST00000168878 DmdP11531 3678 aa8.01□□□□□ -1.13
Shroom3-204ENSMUST00000168878 Krtap3-2Q9D638 99 aa8.01□□□□□ -1.13
Shroom3-204ENSMUST00000168878 Krtap3-3Q9D7P0 99 aa8.01□□□□□ -1.13
Shroom3-204ENSMUST00000168878 Krtap13-1Q8K198 168 aa7.99□□□□□ -1.13
Shroom3-204ENSMUST00000168878 Krtap19-5O08632 62 aa7.93□□□□□ -1.14
Shroom3-204ENSMUST00000168878 OtogO55225 2910 aa7.92□□□□□ -1.14
Shroom3-204ENSMUST00000168878 Krtap3-1A2A591 98 aa7.92□□□□□ -1.14
Shroom3-204ENSMUST00000168878 4933428G20RikQ9D3X4 101 aa7.9□□□□□ -1.14
Shroom3-204ENSMUST00000168878 Gm10318A0A1W2P728 225 aa7.87□□□□□ -1.15
Shroom3-204ENSMUST00000168878 VwfQ8CIZ8 2813 aa7.87□□□□□ -1.15
Shroom3-204ENSMUST00000168878 Csmd1Q923L3 3564 aa7.8□□□□□ -1.16
Shroom3-204ENSMUST00000168878 Lama5Q61001 3718 aa7.75□□□□□ -1.17
Shroom3-204ENSMUST00000168878 Smg1Q8BKX6 3658 aaKnown RBP7.74□□□□□ -1.17
Shroom3-204ENSMUST00000168878 Crct1Q6PAI5 102 aa7.72□□□□□ -1.17
Shroom3-204ENSMUST00000168878 Fbn1Q61554 2873 aaKnown RBP7.7□□□□□ -1.18
Shroom3-204ENSMUST00000168878 Zfhx4Q9JJN2 3550 aa7.66□□□□□ -1.18
Shroom3-204ENSMUST00000168878 SpenQ62504 3644 aaKnown RBP7.57□□□□□ -1.2
Shroom3-204ENSMUST00000168878 Ank2Q8C8R3 3898 aa7.52□□□□□ -1.21
Shroom3-204ENSMUST00000168878 Gm884A2A9H6 3643 aa7.49□□□□□ -1.21
Shroom3-204ENSMUST00000168878 Sprr2a3Q4KL71 83 aa7.38□□□□□ -1.23
Shroom3-204ENSMUST00000168878 Sprr2a1Q9CQK8 83 aa7.38□□□□□ -1.23
Shroom3-204ENSMUST00000168878 Krtap1-5A2A590 122 aa7.36□□□□□ -1.23
Shroom3-204ENSMUST00000168878 Col7a1Q63870 2944 aa7.36□□□□□ -1.23
Shroom3-204ENSMUST00000168878 Krtap7-1Q9D3I6 87 aa7.33□□□□□ -1.24
Shroom3-204ENSMUST00000168878 Svep1A2AVA0 3567 aa7.31□□□□□ -1.24
Shroom3-204ENSMUST00000168878 Cmya5Q70KF4 3739 aa7.3□□□□□ -1.24
Shroom3-204ENSMUST00000168878 Muc6Q80T03 2850 aa7.23□□□□□ -1.25
Shroom3-204ENSMUST00000168878 Krtap19-9aF8WH65 55 aa7.18□□□□□ -1.26
Shroom3-204ENSMUST00000168878 Dnah14A0A140LIJ4 4489 aa7.16□□□□□ -1.26
Shroom3-204ENSMUST00000168878 Gm6358A0A087WPH4 74 aa7.14□□□□□ -1.27
Shroom3-204ENSMUST00000168878 Krtap1-4Q3V2D6 188 aa7.12□□□□□ -1.27
Shroom3-204ENSMUST00000168878 Csmd2V9GX34 3611 aa7.1□□□□□ -1.27
Shroom3-204ENSMUST00000168878 Huwe1Q7TMY8 4377 aaKnown RBP7.1□□□□□ -1.27
Shroom3-204ENSMUST00000168878 Dnah10D3YYQ8 4591 aa7.07□□□□□ -1.28
Shroom3-204ENSMUST00000168878 Dnah5Q8VHE6 4621 aa7.07□□□□□ -1.28
Shroom3-204ENSMUST00000168878 Muc4Q8JZM8 3443 aa7.05□□□□□ -1.28
Shroom3-204ENSMUST00000168878 Krtap19-9bQ99NG9 58 aa7.02□□□□□ -1.29
Shroom3-204ENSMUST00000168878 Gm19402J3QJV4 266 aa6.99□□□□□ -1.29
Shroom3-204ENSMUST00000168878 Stard9Q80TF6 4561 aa6.98□□□□□ -1.29
Shroom3-204ENSMUST00000168878 Krtap8-1O08633 61 aa6.96□□□□□ -1.3
Shroom3-204ENSMUST00000168878 Vps13dB1ART2 4390 aa6.91□□□□□ -1.3
Shroom3-204ENSMUST00000168878 LorP18165 486 aa6.87□□□□□ -1.31
Shroom3-204ENSMUST00000168878 LystP97412 3788 aa6.87□□□□□ -1.31
Shroom3-204ENSMUST00000168878 Krtap12-1Q9Z287 130 aa6.86□□□□□ -1.31
Shroom3-204ENSMUST00000168878 PlecQ9QXS1 4691 aaKnown RBP6.85□□□□□ -1.31
Shroom3-204ENSMUST00000168878 Dnah17Q69Z23 4481 aa6.84□□□□□ -1.32
Shroom3-204ENSMUST00000168878 Gm18596A0A1W2P860 280 aa6.83□□□□□ -1.32
Shroom3-204ENSMUST00000168878 CubnQ9JLB4 3623 aa6.6□□□□□ -1.35
Shroom3-204ENSMUST00000168878 Sprr2kO70562 68 aa6.57□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms