RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Krtap10-4Q08EG8 221 aa5.47□□□□□ -1.53
Col28a1-201ENSMUST00000115537 2310050C09RikG5E8Z3 280 aa5.46□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Odf3bQ5M8M2 238 aa5.43□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Defb9Q8R2I6 67 aa5.43□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Gm21798J3QNU5 87 aa5.43□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Gpr15lA0A0B4J1N3 78 aa5.41□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Gm27235Q3UW50 83 aa5.41□□□□□ -1.54
Col28a1-201ENSMUST00000115537 Sprr1aQ62266 144 aa5.4□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Spaca4Q80ZQ0 127 aa5.4□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Gm2310J3QNJ2 377 aa5.4□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Gm10139O88245 57 aa5.39□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Cypt14J3QPF7 87 aa5.39□□□□□ -1.55
Col28a1-201ENSMUST00000115537 6030445D17RikE9Q8F9 148 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Anapc11Q9CPX9 84 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 2310034C09RikQ9D746 214 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Krtap10-10A0A1W2P7T6 217 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Krtap13O88375 197 aa5.37□□□□□ -1.55
Col28a1-201ENSMUST00000115537 4930507D05RikQ8C9C9 103 aa5.36□□□□□ -1.55
Col28a1-201ENSMUST00000115537 2310061N02RikQ9D6S9 174 aa5.34□□□□□ -1.55
Col28a1-201ENSMUST00000115537 Gm10065F6TJM2 114 aa5.32□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Pla2g10Q9QXX3 151 aa5.32□□□□□ -1.56
Col28a1-201ENSMUST00000115537 LystP97412 3788 aa5.32□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm17606F6ZL36 78 aa5.31□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm3880A0A1B0GSB3 72 aa5.3□□□□□ -1.56
Col28a1-201ENSMUST00000115537 CubnQ9JLB4 3623 aa5.29□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm2696A0A1W2P709 240 aa5.29□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Ank2Q8C8R3 3898 aa5.28□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm20538F6Z9R1 75 aa5.28□□□□□ -1.56
Col28a1-201ENSMUST00000115537 Gm21887J3QQ04 176 aa5.27□□□□□ -1.57
Col28a1-201ENSMUST00000115537 Rnase13Q5GAM7 153 aa5.27□□□□□ -1.57
Col28a1-201ENSMUST00000115537 NbdyA0A0N4SUI7 68 aa5.26□□□□□ -1.57
Col28a1-201ENSMUST00000115537 CriptO70333 101 aa5.23□□□□□ -1.57
Col28a1-201ENSMUST00000115537 Gm16253D3Z167 63 aa5.19□□□□□ -1.58
Col28a1-201ENSMUST00000115537 Tnp2P11378 117 aa5.13□□□□□ -1.59
Col28a1-201ENSMUST00000115537 Romo1P60603 79 aa5.13□□□□□ -1.59
Col28a1-201ENSMUST00000115537 Krtap29-1A2A5X4 342 aa5.12□□□□□ -1.59
Col28a1-201ENSMUST00000115537 Krtap14O08640 167 aa5.08□□□□□ -1.6
Col28a1-201ENSMUST00000115537 Gm9955Q8CEJ8 102 aa5.03□□□□□ -1.6
Col28a1-201ENSMUST00000115537 Sec61bQ9CQS8 96 aaKnown RBP5.02□□□□□ -1.61
Col28a1-201ENSMUST00000115537 Gm4491E0CX42 125 aa5.01□□□□□ -1.61
Col28a1-201ENSMUST00000115537 Xirp2Q4U4S6 3784 aa5.01□□□□□ -1.61
Col28a1-201ENSMUST00000115537 BsnO88737 3942 aa5□□□□□ -1.61
Col28a1-201ENSMUST00000115537 Krtap15-1Q9QZU5 150 aa4.97□□□□□ -1.61
Col28a1-201ENSMUST00000115537 Gm9918Q8BUR5 174 aa4.96□□□□□ -1.62
Col28a1-201ENSMUST00000115537 D6Ertd527eA0A0N4SWI3 464 aa4.95□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Ndufaf8A2AMZ4 74 aa4.95□□□□□ -1.62
Col28a1-201ENSMUST00000115537 TnxbO35452 4006 aa4.95□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Gm20537G3UYK7 97 aa4.94□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Hspg2Q05793 3707 aaKnown RBP4.93□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Gm10382Q3V0T5 144 aa4.93□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Rpl37Q9D823 97 aa4.93□□□□□ -1.62
Col28a1-201ENSMUST00000115537 2310079G19RikQ9D6L6 185 aa4.92□□□□□ -1.62
Col28a1-201ENSMUST00000115537 Dnah14A0A140LIJ4 4489 aa4.9□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Prm2P07978 107 aa4.89□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Cox6b2Q80ZN9 88 aa4.87□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Dnah10D3YYQ8 4591 aa4.87□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Gm5767A0A0J9YTU8 78 aa4.85□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Ryr1E9PZQ0 5035 aa4.85□□□□□ -1.63
Col28a1-201ENSMUST00000115537 Gm9112A2AI92 75 aa4.79□□□□□ -1.64
Col28a1-201ENSMUST00000115537 A930033H14RikG5E8X6 103 aa4.79□□□□□ -1.64
Col28a1-201ENSMUST00000115537 Gm5965D3Z724 196 aa4.79□□□□□ -1.64
Col28a1-201ENSMUST00000115537 Spink7Q6IE32 76 aa4.76□□□□□ -1.65
Col28a1-201ENSMUST00000115537 Fam229aB2KGE5 128 aa4.75□□□□□ -1.65
Col28a1-201ENSMUST00000115537 Gm9736A0A1W2P7N1 277 aa4.72□□□□□ -1.65
Col28a1-201ENSMUST00000115537 Huwe1Q7TMY8 4377 aaKnown RBP4.69□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Gm19426M0QWC7 77 aa4.68□□□□□ -1.66
Col28a1-201ENSMUST00000115537 2310057N15RikQ9D6T8 200 aa4.68□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Csmd3Q80T79 3707 aa4.68□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Rps29P62274 56 aa4.68□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Krtap3-2Q9D638 99 aa4.65□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Krtap3-3Q9D7P0 99 aa4.65□□□□□ -1.66
Col28a1-201ENSMUST00000115537 Krtap19-5O08632 62 aa4.65□□□□□ -1.67
Col28a1-201ENSMUST00000115537 Ryr3A2AGL3 4863 aa4.6□□□□□ -1.67
Col28a1-201ENSMUST00000115537 Camk2n1Q6QWF9 78 aa4.59□□□□□ -1.67
Col28a1-201ENSMUST00000115537 PlecQ9QXS1 4691 aaKnown RBP4.58□□□□□ -1.68
Col28a1-201ENSMUST00000115537 BC029722A0A0N4SW31 51 aa4.58□□□□□ -1.68
Col28a1-201ENSMUST00000115537 Gm11939A2A592 99 aa4.57□□□□□ -1.68
Col28a1-201ENSMUST00000115537 Dnah11E9Q7N9 4488 aa4.52□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Dnah5Q8VHE6 4621 aa4.52□□□□□ -1.69
Col28a1-201ENSMUST00000115537 PrkdcP97313 4128 aa4.51□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Dnah7bL7N1Y0 4068 aa4.51□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Kmt2aP55200 3966 aa4.48□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Vps13dB1ART2 4390 aa4.47□□□□□ -1.69
Col28a1-201ENSMUST00000115537 Gm40193A0A1B0GT39 78 aa4.46□□□□□ -1.7
Col28a1-201ENSMUST00000115537 2210017I01RikA0A0A6YVV1 95 aa4.46□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Stard9Q80TF6 4561 aa4.45□□□□□ -1.7
Col28a1-201ENSMUST00000115537 B930094E09RikQ8C4T2 136 aa4.45□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Dnah3Q8BW94 4083 aa4.44□□□□□ -1.7
Col28a1-201ENSMUST00000115537 HydinQ80W93 5154 aa4.42□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Kiaa1109A2AAE1 5005 aa4.42□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Dnah6E9Q0B6 4144 aa4.42□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Dnah17Q69Z23 4481 aa4.42□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Herc2Q4U2R1 4836 aa4.41□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Gm18596A0A1W2P860 280 aa4.4□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Mycbp2Q7TPH6 4711 aa4.4□□□□□ -1.7
Col28a1-201ENSMUST00000115537 Crct1Q6PAI5 102 aa4.4□□□□□ -1.71
Col28a1-201ENSMUST00000115537 Dnah9B1AR51 4484 aa4.4□□□□□ -1.71
Col28a1-201ENSMUST00000115537 Fras1Q80T14 4010 aa4.39□□□□□ -1.71
Col28a1-201ENSMUST00000115537 Gm10318A0A1W2P728 225 aa4.39□□□□□ -1.71
Col28a1-201ENSMUST00000115537 Dnah1E9Q8T7 4250 aa4.34□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 105 ms