RNA–Protein interactions for RNA: ENSMUST00000115274.1

Pdgfrb-202, Transcript of Platelet-derived growth factor receptor beta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdgfrb, Length 5,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfrb-202ENSMUST00000115274 Pkd1l1Q8R526 2615 aa5.51□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Itpr2Q9Z329 2701 aa5.5□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Smg1Q8BKX6 3658 aaKnown RBP5.49□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Csmd1Q923L3 3564 aa5.49□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Tex15F8VPN2 2785 aa5.49□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Prm2P07978 107 aa5.49□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Gm21887J3QQ04 176 aa5.48□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Sec61bQ9CQS8 96 aaKnown RBP5.47□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Gm10382Q3V0T5 144 aa5.47□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 2310050C09RikG5E8Z3 280 aa5.47□□□□□ -1.53
Pdgfrb-202ENSMUST00000115274 Krtap15-1Q9QZU5 150 aa5.46□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Krtap13O88375 197 aa5.45□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Gm9507D3Z5T3 223 aa5.45□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Celsr2Q9R0M0 2920 aa5.45□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 FlncQ8VHX6 2726 aaKnown RBP5.44□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Chd9Q8BYH8 2885 aa5.44□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Gm5767A0A0J9YTU8 78 aa5.41□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Krtap14O08640 167 aa5.41□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 ApcQ61315 2845 aa5.4□□□□□ -1.54
Pdgfrb-202ENSMUST00000115274 Ndufaf8A2AMZ4 74 aa5.4□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Tnp2P11378 117 aa5.38□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Cox6b2Q80ZN9 88 aa5.37□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Nf1Q04690 2841 aa5.37□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Rps29P62274 56 aa5.36□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Muc5acE9QAQ8 3455 aa5.36□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 TgO08710 2766 aa5.35□□□□□ -1.55
Pdgfrb-202ENSMUST00000115274 Gm19426M0QWC7 77 aa5.34□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Tenm3Q9WTS6 2715 aa5.34□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Krtap10-4Q08EG8 221 aa5.33□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Tenm4Q3UHK6 2771 aa5.32□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 FcgbpE9Q0B5 2583 aa5.31□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Helz2E9QAM5 2947 aaKnown RBP5.31□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 Svep1A2AVA0 3567 aa5.3□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 D6Ertd527eA0A0N4SWI3 464 aa5.3□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 BC029722A0A0N4SW31 51 aa5.29□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 LrbaQ9ESE1 2856 aa5.28□□□□□ -1.56
Pdgfrb-202ENSMUST00000115274 OtogO55225 2910 aa5.27□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Gm9112A2AI92 75 aa5.26□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Krtap10-10A0A1W2P7T6 217 aa5.24□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Srrm2Q8BTI8 2703 aaKnown RBP5.23□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Pdzd2E9Q1M1 2796 aa5.23□□□□□ -1.57
Pdgfrb-202ENSMUST00000115274 Cmya5Q70KF4 3739 aa5.19□□□□□ -1.58
Pdgfrb-202ENSMUST00000115274 Ank2Q8C8R3 3898 aa5.16□□□□□ -1.58
Pdgfrb-202ENSMUST00000115274 Gm2696A0A1W2P709 240 aa5.15□□□□□ -1.59
Pdgfrb-202ENSMUST00000115274 Gm20537G3UYK7 97 aa5.12□□□□□ -1.59
Pdgfrb-202ENSMUST00000115274 Gm40193A0A1B0GT39 78 aa5.07□□□□□ -1.6
Pdgfrb-202ENSMUST00000115274 Fbn1Q61554 2873 aaKnown RBP5.04□□□□□ -1.6
Pdgfrb-202ENSMUST00000115274 LystP97412 3788 aa5.03□□□□□ -1.6
Pdgfrb-202ENSMUST00000115274 A930033H14RikG5E8X6 103 aa5.02□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 2310057N15RikQ9D6T8 200 aa5.01□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 2310079G19RikQ9D6L6 185 aa5.01□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 Muc4Q8JZM8 3443 aa5.01□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 Gm5965D3Z724 196 aa5□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 Csmd2V9GX34 3611 aa4.98□□□□□ -1.61
Pdgfrb-202ENSMUST00000115274 B930094E09RikQ8C4T2 136 aa4.9□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 Tnp1P10856 55 aa4.89□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 Tenm1Q9WTS4 2731 aa4.88□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 BsnO88737 3942 aa4.88□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 Col7a1Q63870 2944 aa4.85□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 Tenm2Q9WTS5 2764 aa4.85□□□□□ -1.63
Pdgfrb-202ENSMUST00000115274 CubnQ9JLB4 3623 aa4.83□□□□□ -1.64
Pdgfrb-202ENSMUST00000115274 Xirp2Q4U4S6 3784 aa4.81□□□□□ -1.64
Pdgfrb-202ENSMUST00000115274 Gm9918Q8BUR5 174 aa4.81□□□□□ -1.64
Pdgfrb-202ENSMUST00000115274 Gm17416Q30KP4 66 aa4.8□□□□□ -1.64
Pdgfrb-202ENSMUST00000115274 Dnah14A0A140LIJ4 4489 aa4.77□□□□□ -1.65
Pdgfrb-202ENSMUST00000115274 VwfQ8CIZ8 2813 aa4.77□□□□□ -1.65
Pdgfrb-202ENSMUST00000115274 Huwe1Q7TMY8 4377 aaKnown RBP4.7□□□□□ -1.66
Pdgfrb-202ENSMUST00000115274 Gm9736A0A1W2P7N1 277 aa4.69□□□□□ -1.66
Pdgfrb-202ENSMUST00000115274 2210017I01RikA0A0A6YVV1 95 aa4.68□□□□□ -1.66
Pdgfrb-202ENSMUST00000115274 Gm17402F6Z0L5 76 aa4.68□□□□□ -1.66
Pdgfrb-202ENSMUST00000115274 Megf8P60882 2789 aa4.62□□□□□ -1.67
Pdgfrb-202ENSMUST00000115274 Gm11939A2A592 99 aa4.62□□□□□ -1.67
Pdgfrb-202ENSMUST00000115274 Krtap3-2Q9D638 99 aa4.59□□□□□ -1.67
Pdgfrb-202ENSMUST00000115274 Krtap3-3Q9D7P0 99 aa4.59□□□□□ -1.67
Pdgfrb-202ENSMUST00000115274 Krtap19-5O08632 62 aa4.59□□□□□ -1.68
Pdgfrb-202ENSMUST00000115274 Dnah17Q69Z23 4481 aa4.57□□□□□ -1.68
Pdgfrb-202ENSMUST00000115274 Hspg2Q05793 3707 aaKnown RBP4.54□□□□□ -1.68
Pdgfrb-202ENSMUST00000115274 Muc6Q80T03 2850 aa4.54□□□□□ -1.68
Pdgfrb-202ENSMUST00000115274 Dnah6E9Q0B6 4144 aa4.5□□□□□ -1.69
Pdgfrb-202ENSMUST00000115274 4933428G20RikQ9D3X4 101 aa4.46□□□□□ -1.69
Pdgfrb-202ENSMUST00000115274 TnxbO35452 4006 aa4.46□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Dnah10D3YYQ8 4591 aa4.46□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Kmt2aP55200 3966 aa4.45□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Dnah7bL7N1Y0 4068 aa4.45□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Dnah3Q8BW94 4083 aa4.44□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Dnah11E9Q7N9 4488 aa4.44□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Krtap3-1A2A591 98 aa4.43□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Krtap13-1Q8K198 168 aa4.42□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 Gm19668J3QMD1 248 aa4.4□□□□□ -1.7
Pdgfrb-202ENSMUST00000115274 PlecQ9QXS1 4691 aaKnown RBP4.39□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Krtap7-1Q9D3I6 87 aa4.36□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Dnah1E9Q8T7 4250 aa4.36□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Vps13dB1ART2 4390 aa4.35□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Dnah9B1AR51 4484 aa4.35□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Dync2h1Q45VK7 4306 aa4.35□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Dnah5Q8VHE6 4621 aa4.35□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 Csmd3Q80T79 3707 aa4.34□□□□□ -1.71
Pdgfrb-202ENSMUST00000115274 PrkdcP97313 4128 aa4.33□□□□□ -1.72
Pdgfrb-202ENSMUST00000115274 Gm10318A0A1W2P728 225 aa4.33□□□□□ -1.72
Pdgfrb-202ENSMUST00000115274 Crct1Q6PAI5 102 aa4.28□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 91.3 ms