RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 CriptO70333 101 aa4.59□□□□□ -1.67
Chm-202ENSMUST00000113388 Defb42Q8BVB5 75 aa4.58□□□□□ -1.68
Chm-202ENSMUST00000113388 TgO08710 2766 aa4.57□□□□□ -1.68
Chm-202ENSMUST00000113388 Gm10772F7AIG4 85 aa4.57□□□□□ -1.68
Chm-202ENSMUST00000113388 Odf3bQ5M8M2 238 aa4.55□□□□□ -1.68
Chm-202ENSMUST00000113388 Prol1E9PYQ4 312 aa4.55□□□□□ -1.68
Chm-202ENSMUST00000113388 Gm9507D3Z5T3 223 aa4.54□□□□□ -1.68
Chm-202ENSMUST00000113388 Dmac1Q9CQ00 111 aa4.53□□□□□ -1.68
Chm-202ENSMUST00000113388 Gm9112A2AI92 75 aa4.53□□□□□ -1.68
Chm-202ENSMUST00000113388 Sprr1bQ62267 153 aa4.52□□□□□ -1.69
Chm-202ENSMUST00000113388 Fras1Q80T14 4010 aa4.51□□□□□ -1.69
Chm-202ENSMUST00000113388 A0A1Y7VLE6 161 aa4.5□□□□□ -1.69
Chm-202ENSMUST00000113388 Gm21798J3QNU5 87 aa4.5□□□□□ -1.69
Chm-202ENSMUST00000113388 Krtap26-1Q9D7N2 215 aa4.5□□□□□ -1.69
Chm-202ENSMUST00000113388 Csmd3Q80T79 3707 aa4.49□□□□□ -1.69
Chm-202ENSMUST00000113388 Huwe1Q7TMY8 4377 aaKnown RBP4.49□□□□□ -1.69
Chm-202ENSMUST00000113388 Gm17606F6ZL36 78 aa4.49□□□□□ -1.69
Chm-202ENSMUST00000113388 Ly6g6cQ9Z1Q4 126 aa4.49□□□□□ -1.69
Chm-202ENSMUST00000113388 Wfdc3Q14AE4 130 aa4.47□□□□□ -1.69
Chm-202ENSMUST00000113388 SycnQ8VCK7 134 aa4.46□□□□□ -1.69
Chm-202ENSMUST00000113388 PrkdcP97313 4128 aa4.46□□□□□ -1.7
Chm-202ENSMUST00000113388 Nupr2Q497P3 102 aa4.45□□□□□ -1.7
Chm-202ENSMUST00000113388 Plac8Q9JI48 112 aa4.44□□□□□ -1.7
Chm-202ENSMUST00000113388 Kmt2aP55200 3966 aa4.44□□□□□ -1.7
Chm-202ENSMUST00000113388 Snhg11Q4G0K9 87 aa4.44□□□□□ -1.7
Chm-202ENSMUST00000113388 4930507D05RikQ8C9C9 103 aa4.44□□□□□ -1.7
Chm-202ENSMUST00000113388 Psors1c2Q80ZC9 134 aa4.44□□□□□ -1.7
Chm-202ENSMUST00000113388 Q8K1L6 76 aa4.42□□□□□ -1.7
Chm-202ENSMUST00000113388 Gm4491E0CX42 125 aa4.42□□□□□ -1.7
Chm-202ENSMUST00000113388 Sprr4Q8CGN8 76 aa4.41□□□□□ -1.7
Chm-202ENSMUST00000113388 Gm11627A6PWP4 55 aa4.4□□□□□ -1.71
Chm-202ENSMUST00000113388 Dnah7bL7N1Y0 4068 aa4.4□□□□□ -1.71
Chm-202ENSMUST00000113388 Fam168bQ80XQ8 194 aa4.39□□□□□ -1.71
Chm-202ENSMUST00000113388 Krtap10-4Q08EG8 221 aa4.39□□□□□ -1.71
Chm-202ENSMUST00000113388 PlecQ9QXS1 4691 aaKnown RBP4.38□□□□□ -1.71
Chm-202ENSMUST00000113388 Ryr3A2AGL3 4863 aa4.38□□□□□ -1.71
Chm-202ENSMUST00000113388 Krtap14O08640 167 aa4.37□□□□□ -1.71
Chm-202ENSMUST00000113388 Ryr1E9PZQ0 5035 aa4.37□□□□□ -1.71
Chm-202ENSMUST00000113388 Gm9918Q8BUR5 174 aa4.37□□□□□ -1.71
Chm-202ENSMUST00000113388 2310050C09RikG5E8Z3 280 aa4.36□□□□□ -1.71
Chm-202ENSMUST00000113388 Dnah17Q69Z23 4481 aa4.35□□□□□ -1.71
Chm-202ENSMUST00000113388 Dnah3Q8BW94 4083 aa4.34□□□□□ -1.71
Chm-202ENSMUST00000113388 Krtap15-1Q9QZU5 150 aa4.32□□□□□ -1.72
Chm-202ENSMUST00000113388 Dnah7aE9Q0T8 4024 aa4.31□□□□□ -1.72
Chm-202ENSMUST00000113388 Stard9Q80TF6 4561 aa4.3□□□□□ -1.72
Chm-202ENSMUST00000113388 Gm10382Q3V0T5 144 aa4.3□□□□□ -1.72
Chm-202ENSMUST00000113388 Defb39Q70KL3 74 aa4.29□□□□□ -1.72
Chm-202ENSMUST00000113388 AW011738F6S7Q2 159 aa4.29□□□□□ -1.72
Chm-202ENSMUST00000113388 Gm9955Q8CEJ8 102 aa4.29□□□□□ -1.72
Chm-202ENSMUST00000113388 2310057N15RikQ9D6T8 200 aa4.28□□□□□ -1.72
Chm-202ENSMUST00000113388 Gm2696A0A1W2P709 240 aa4.28□□□□□ -1.72
Chm-202ENSMUST00000113388 Gm2310J3QNJ2 377 aa4.28□□□□□ -1.72
Chm-202ENSMUST00000113388 HrnrQ8VHD8 2496 aa4.28□□□□□ -1.72
Chm-202ENSMUST00000113388 Gm10642Q3TWM1 71 aa4.26□□□□□ -1.73
Chm-202ENSMUST00000113388 2310061N02RikQ9D6S9 174 aa4.26□□□□□ -1.73
Chm-202ENSMUST00000113388 A0A1Y7VJH8 109 aa4.26□□□□□ -1.73
Chm-202ENSMUST00000113388 Dnah9B1AR51 4484 aa4.24□□□□□ -1.73
Chm-202ENSMUST00000113388 Ryr2E9Q401 4966 aaKnown RBP4.24□□□□□ -1.73
Chm-202ENSMUST00000113388 Dnah11E9Q7N9 4488 aa4.24□□□□□ -1.73
Chm-202ENSMUST00000113388 Dync2h1Q45VK7 4306 aa4.23□□□□□ -1.73
Chm-202ENSMUST00000113388 Camk2n1Q6QWF9 78 aa4.23□□□□□ -1.73
Chm-202ENSMUST00000113388 Dnah7cA0A087WR13 4024 aa4.23□□□□□ -1.73
Chm-202ENSMUST00000113388 Krtap13O88375 197 aa4.23□□□□□ -1.73
Chm-202ENSMUST00000113388 Dnah1E9Q8T7 4250 aa4.22□□□□□ -1.73
Chm-202ENSMUST00000113388 Gm5965D3Z724 196 aa4.22□□□□□ -1.73
Chm-202ENSMUST00000113388 Rpl37Q9D823 97 aa4.22□□□□□ -1.73
Chm-202ENSMUST00000113388 Vps13dB1ART2 4390 aa4.21□□□□□ -1.74
Chm-202ENSMUST00000113388 Dnah5Q8VHE6 4621 aa4.19□□□□□ -1.74
Chm-202ENSMUST00000113388 Krtap28-10A0A1Y7VP58 119 aa4.19□□□□□ -1.74
Chm-202ENSMUST00000113388 Adm2Q7TNK8 150 aa4.19□□□□□ -1.74
Chm-202ENSMUST00000113388 Spaca4Q80ZQ0 127 aa4.18□□□□□ -1.74
Chm-202ENSMUST00000113388 Gpr15lA0A0B4J1N3 78 aa4.17□□□□□ -1.74
Chm-202ENSMUST00000113388 Fam229aB2KGE5 128 aa4.17□□□□□ -1.74
Chm-202ENSMUST00000113388 Gm10139O88245 57 aa4.17□□□□□ -1.74
Chm-202ENSMUST00000113388 1600014C23RikQ9DAX4 101 aa4.14□□□□□ -1.75
Chm-202ENSMUST00000113388 A030003K21RikA0A1Y7VIM3 128 aa4.13□□□□□ -1.75
Chm-202ENSMUST00000113388 Cox6b2Q80ZN9 88 aa4.13□□□□□ -1.75
Chm-202ENSMUST00000113388 Dync1h1Q9JHU4 4644 aaKnown RBP4.13□□□□□ -1.75
Chm-202ENSMUST00000113388 Gm20537G3UYK7 97 aa4.12□□□□□ -1.75
Chm-202ENSMUST00000113388 Anapc11Q9CPX9 84 aa4.12□□□□□ -1.75
Chm-202ENSMUST00000113388 Dnah2P0C6F1 4456 aa4.12□□□□□ -1.75
Chm-202ENSMUST00000113388 SacsQ9JLC8 4582 aa4.11□□□□□ -1.75
Chm-202ENSMUST00000113388 Fat1A0A1L1SQU7 4645 aa4.1□□□□□ -1.75
Chm-202ENSMUST00000113388 Herc2Q4U2R1 4836 aa4.06□□□□□ -1.76
Chm-202ENSMUST00000113388 Pkd1O08852 4293 aa4.06□□□□□ -1.76
Chm-202ENSMUST00000113388 Tnp2P11378 117 aa4.06□□□□□ -1.76
Chm-202ENSMUST00000113388 ApobE9Q414 4505 aa4.05□□□□□ -1.76
Chm-202ENSMUST00000113388 Gm16253D3Z167 63 aa4.05□□□□□ -1.76
Chm-202ENSMUST00000113388 Sprr1aQ62266 144 aa4.03□□□□□ -1.76
Chm-202ENSMUST00000113388 Gm10065F6TJM2 114 aa4.01□□□□□ -1.77
Chm-202ENSMUST00000113388 Kiaa1109A2AAE1 5005 aa4□□□□□ -1.77
Chm-202ENSMUST00000113388 Kmt2cQ8BRH4 4903 aa3.99□□□□□ -1.77
Chm-202ENSMUST00000113388 Gm19426M0QWC7 77 aa3.99□□□□□ -1.77
Chm-202ENSMUST00000113388 D6Ertd527eA0A0N4SWI3 464 aa3.98□□□□□ -1.77
Chm-202ENSMUST00000113388 Pkhd1E9PZ36 4059 aa3.97□□□□□ -1.77
Chm-202ENSMUST00000113388 A030005L19RikA0A1Y7VIU2 113 aa3.96□□□□□ -1.77
Chm-202ENSMUST00000113388 HydinQ80W93 5154 aa3.96□□□□□ -1.77
Chm-202ENSMUST00000113388 Krtap28-13A0A087WQP5 138 aa3.96□□□□□ -1.78
Chm-202ENSMUST00000113388 Gm40193A0A1B0GT39 78 aa3.95□□□□□ -1.78
Chm-202ENSMUST00000113388 Abca13Q5SSE9 5034 aa3.95□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms