RNA–Protein interactions for RNA: ENSMUST00000111566.8

Clip1-205, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clip1, Length 6,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-205ENSMUST00000111566 DspE9Q557 2883 aaKnown RBP10.82□□□□□ -0.68
Clip1-205ENSMUST00000111566 Unc80Q8BLN6 3261 aa10.82□□□□□ -0.68
Clip1-205ENSMUST00000111566 Tenm4Q3UHK6 2771 aa10.8□□□□□ -0.68
Clip1-205ENSMUST00000111566 Frem2Q6NVD0 3160 aa10.79□□□□□ -0.68
Clip1-205ENSMUST00000111566 Zzef1Q5SSH7 2924 aa10.78□□□□□ -0.68
Clip1-205ENSMUST00000111566 TgO08710 2766 aa10.77□□□□□ -0.69
Clip1-205ENSMUST00000111566 Tnp1P10856 55 aa10.76□□□□□ -0.69
Clip1-205ENSMUST00000111566 Gm20537G3UYK7 97 aa10.75□□□□□ -0.69
Clip1-205ENSMUST00000111566 Gm2696A0A1W2P709 240 aa10.74□□□□□ -0.69
Clip1-205ENSMUST00000111566 Gm40193A0A1B0GT39 78 aa10.73□□□□□ -0.69
Clip1-205ENSMUST00000111566 Lama1P19137 3084 aa10.71□□□□□ -0.7
Clip1-205ENSMUST00000111566 Srrm2Q8BTI8 2703 aaKnown RBP10.7□□□□□ -0.7
Clip1-205ENSMUST00000111566 Celsr3Q91ZI0 3301 aa10.68□□□□□ -0.7
Clip1-205ENSMUST00000111566 Celsr2Q9R0M0 2920 aa10.66□□□□□ -0.7
Clip1-205ENSMUST00000111566 Gm5965D3Z724 196 aa10.62□□□□□ -0.71
Clip1-205ENSMUST00000111566 ApcQ61315 2845 aa10.59□□□□□ -0.71
Clip1-205ENSMUST00000111566 2310057N15RikQ9D6T8 200 aa10.57□□□□□ -0.72
Clip1-205ENSMUST00000111566 Dchs2A0A0A6YW72 3346 aa10.57□□□□□ -0.72
Clip1-205ENSMUST00000111566 Chd9Q8BYH8 2885 aa10.56□□□□□ -0.72
Clip1-205ENSMUST00000111566 Tenm3Q9WTS6 2715 aa10.56□□□□□ -0.72
Clip1-205ENSMUST00000111566 Trank1Q8BV79 2999 aa10.54□□□□□ -0.72
Clip1-205ENSMUST00000111566 Brca2P97929 3329 aa10.52□□□□□ -0.73
Clip1-205ENSMUST00000111566 Pdzd2E9Q1M1 2796 aa10.5□□□□□ -0.73
Clip1-205ENSMUST00000111566 Zfhx3Q61329 3726 aa10.46□□□□□ -0.73
Clip1-205ENSMUST00000111566 Nf1Q04690 2841 aa10.46□□□□□ -0.74
Clip1-205ENSMUST00000111566 B930094E09RikQ8C4T2 136 aa10.45□□□□□ -0.74
Clip1-205ENSMUST00000111566 Prm2P07978 107 aa10.41□□□□□ -0.74
Clip1-205ENSMUST00000111566 Col6a3E9PWQ3 3284 aa10.37□□□□□ -0.75
Clip1-205ENSMUST00000111566 2310079G19RikQ9D6L6 185 aa10.3□□□□□ -0.76
Clip1-205ENSMUST00000111566 A930033H14RikG5E8X6 103 aa10.29□□□□□ -0.76
Clip1-205ENSMUST00000111566 VcanQ62059 3357 aa10.28□□□□□ -0.76
Clip1-205ENSMUST00000111566 LrbaQ9ESE1 2856 aa10.22□□□□□ -0.77
Clip1-205ENSMUST00000111566 Dchs1E9PVD3 3291 aa10.1□□□□□ -0.79
Clip1-205ENSMUST00000111566 Tenm1Q9WTS4 2731 aa10.1□□□□□ -0.79
Clip1-205ENSMUST00000111566 Helz2E9QAM5 2947 aaKnown RBP10.07□□□□□ -0.8
Clip1-205ENSMUST00000111566 RelnQ60841 3461 aa10.01□□□□□ -0.81
Clip1-205ENSMUST00000111566 SpegQ62407 3262 aa9.92□□□□□ -0.82
Clip1-205ENSMUST00000111566 Tenm2Q9WTS5 2764 aa9.92□□□□□ -0.82
Clip1-205ENSMUST00000111566 Gm9736A0A1W2P7N1 277 aa9.89□□□□□ -0.83
Clip1-205ENSMUST00000111566 Gm17416Q30KP4 66 aa9.86□□□□□ -0.83
Clip1-205ENSMUST00000111566 Wdfy3Q6VNB8 3508 aa9.83□□□□□ -0.84
Clip1-205ENSMUST00000111566 Gm9918Q8BUR5 174 aa9.79□□□□□ -0.84
Clip1-205ENSMUST00000111566 Myo15aQ9QZZ4 3511 aa9.78□□□□□ -0.84
Clip1-205ENSMUST00000111566 Muc5acE9QAQ8 3455 aa9.77□□□□□ -0.85
Clip1-205ENSMUST00000111566 2210017I01RikA0A0A6YVV1 95 aa9.76□□□□□ -0.85
Clip1-205ENSMUST00000111566 Gm17402F6Z0L5 76 aa9.76□□□□□ -0.85
Clip1-205ENSMUST00000111566 OtogO55225 2910 aa9.73□□□□□ -0.85
Clip1-205ENSMUST00000111566 Akap9Q70FJ1 3797 aa9.7□□□□□ -0.86
Clip1-205ENSMUST00000111566 Vps13cQ8BX70 3748 aa9.68□□□□□ -0.86
Clip1-205ENSMUST00000111566 Gm10318A0A1W2P728 225 aa9.54□□□□□ -0.88
Clip1-205ENSMUST00000111566 VwfQ8CIZ8 2813 aa9.53□□□□□ -0.88
Clip1-205ENSMUST00000111566 DmdP11531 3678 aa9.53□□□□□ -0.88
Clip1-205ENSMUST00000111566 Megf8P60882 2789 aa9.53□□□□□ -0.88
Clip1-205ENSMUST00000111566 Gm19668J3QMD1 248 aa9.52□□□□□ -0.89
Clip1-205ENSMUST00000111566 Fbn1Q61554 2873 aaKnown RBP9.46□□□□□ -0.89
Clip1-205ENSMUST00000111566 4933428G20RikQ9D3X4 101 aa9.43□□□□□ -0.9
Clip1-205ENSMUST00000111566 Gm11939A2A592 99 aa9.37□□□□□ -0.91
Clip1-205ENSMUST00000111566 Csmd1Q923L3 3564 aa9.32□□□□□ -0.92
Clip1-205ENSMUST00000111566 Krtap13-1Q8K198 168 aa9.3□□□□□ -0.92
Clip1-205ENSMUST00000111566 Lama5Q61001 3718 aa9.23□□□□□ -0.93
Clip1-205ENSMUST00000111566 Zfhx4Q9JJN2 3550 aa9.22□□□□□ -0.93
Clip1-205ENSMUST00000111566 Krtap19-5O08632 62 aa9.21□□□□□ -0.94
Clip1-205ENSMUST00000111566 Crct1Q6PAI5 102 aa9.2□□□□□ -0.94
Clip1-205ENSMUST00000111566 Smg1Q8BKX6 3658 aaKnown RBP9.2□□□□□ -0.94
Clip1-205ENSMUST00000111566 Col7a1Q63870 2944 aa9.2□□□□□ -0.94
Clip1-205ENSMUST00000111566 Krtap3-1A2A591 98 aa9.18□□□□□ -0.94
Clip1-205ENSMUST00000111566 Krtap3-2Q9D638 99 aa9.12□□□□□ -0.95
Clip1-205ENSMUST00000111566 Krtap3-3Q9D7P0 99 aa9.12□□□□□ -0.95
Clip1-205ENSMUST00000111566 Muc6Q80T03 2850 aa9.03□□□□□ -0.96
Clip1-205ENSMUST00000111566 SpenQ62504 3644 aaKnown RBP9.01□□□□□ -0.97
Clip1-205ENSMUST00000111566 Ank2Q8C8R3 3898 aa9□□□□□ -0.97
Clip1-205ENSMUST00000111566 Muc4Q8JZM8 3443 aa8.75□□□□□ -1.01
Clip1-205ENSMUST00000111566 Gm884A2A9H6 3643 aa8.75□□□□□ -1.01
Clip1-205ENSMUST00000111566 Gm6358A0A087WPH4 74 aa8.69□□□□□ -1.02
Clip1-205ENSMUST00000111566 Svep1A2AVA0 3567 aa8.64□□□□□ -1.03
Clip1-205ENSMUST00000111566 Cmya5Q70KF4 3739 aa8.63□□□□□ -1.03
Clip1-205ENSMUST00000111566 Krtap7-1Q9D3I6 87 aa8.61□□□□□ -1.03
Clip1-205ENSMUST00000111566 Dnah14A0A140LIJ4 4489 aa8.58□□□□□ -1.04
Clip1-205ENSMUST00000111566 Sprr2a3Q4KL71 83 aa8.52□□□□□ -1.05
Clip1-205ENSMUST00000111566 Sprr2a1Q9CQK8 83 aa8.52□□□□□ -1.05
Clip1-205ENSMUST00000111566 Krtap1-5A2A590 122 aa8.43□□□□□ -1.06
Clip1-205ENSMUST00000111566 Huwe1Q7TMY8 4377 aaKnown RBP8.42□□□□□ -1.06
Clip1-205ENSMUST00000111566 Csmd2V9GX34 3611 aa8.39□□□□□ -1.07
Clip1-205ENSMUST00000111566 Krtap19-9aF8WH65 55 aa8.35□□□□□ -1.07
Clip1-205ENSMUST00000111566 Dnah5Q8VHE6 4621 aa8.34□□□□□ -1.07
Clip1-205ENSMUST00000111566 Stard9Q80TF6 4561 aa8.31□□□□□ -1.08
Clip1-205ENSMUST00000111566 Dnah10D3YYQ8 4591 aa8.31□□□□□ -1.08
Clip1-205ENSMUST00000111566 Vps13dB1ART2 4390 aa8.26□□□□□ -1.09
Clip1-205ENSMUST00000111566 Gm19402J3QJV4 266 aa8.25□□□□□ -1.09
Clip1-205ENSMUST00000111566 PlecQ9QXS1 4691 aaKnown RBP8.23□□□□□ -1.09
Clip1-205ENSMUST00000111566 Krtap1-4Q3V2D6 188 aa8.21□□□□□ -1.09
Clip1-205ENSMUST00000111566 Krtap8-1O08633 61 aa8.2□□□□□ -1.1
Clip1-205ENSMUST00000111566 LystP97412 3788 aa8.17□□□□□ -1.1
Clip1-205ENSMUST00000111566 Krtap19-9bQ99NG9 58 aa8.17□□□□□ -1.1
Clip1-205ENSMUST00000111566 Dnah17Q69Z23 4481 aa8.13□□□□□ -1.11
Clip1-205ENSMUST00000111566 Krtap12-1Q9Z287 130 aa8.04□□□□□ -1.12
Clip1-205ENSMUST00000111566 Gm18596A0A1W2P860 280 aa8.01□□□□□ -1.13
Clip1-205ENSMUST00000111566 LorP18165 486 aa8.01□□□□□ -1.13
Clip1-205ENSMUST00000111566 CubnQ9JLB4 3623 aa7.9□□□□□ -1.14
Clip1-205ENSMUST00000111566 Sprr2kO70562 68 aa7.87□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms