RNA–Protein interactions for RNA: ENSMUST00000106550.10

Knop1-204, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Knop1, Length 5,524 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-204ENSMUST00000106550 2310057N15RikQ9D6T8 200 aa7.44□□□□□ -1.22
Knop1-204ENSMUST00000106550 FryE9Q8I9 3020 aa7.43□□□□□ -1.22
Knop1-204ENSMUST00000106550 Igfn1Q3KNY0 2849 aa7.43□□□□□ -1.22
Knop1-204ENSMUST00000106550 ApcQ61315 2845 aa7.41□□□□□ -1.22
Knop1-204ENSMUST00000106550 Zfhx3Q61329 3726 aa7.4□□□□□ -1.22
Knop1-204ENSMUST00000106550 Dmxl2Q8BPN8 3032 aa7.4□□□□□ -1.22
Knop1-204ENSMUST00000106550 Zzef1Q5SSH7 2924 aa7.39□□□□□ -1.23
Knop1-204ENSMUST00000106550 FrylF8VQ05 3007 aa7.38□□□□□ -1.23
Knop1-204ENSMUST00000106550 Ndufaf8A2AMZ4 74 aa7.38□□□□□ -1.23
Knop1-204ENSMUST00000106550 Lama1P19137 3084 aa7.36□□□□□ -1.23
Knop1-204ENSMUST00000106550 Tenm4Q3UHK6 2771 aa7.35□□□□□ -1.23
Knop1-204ENSMUST00000106550 Brca2P97929 3329 aa7.34□□□□□ -1.23
Knop1-204ENSMUST00000106550 Gm20537G3UYK7 97 aa7.29□□□□□ -1.24
Knop1-204ENSMUST00000106550 Tnp1P10856 55 aa7.27□□□□□ -1.25
Knop1-204ENSMUST00000106550 DspE9Q557 2883 aaKnown RBP7.26□□□□□ -1.25
Knop1-204ENSMUST00000106550 Dchs2A0A0A6YW72 3346 aa7.25□□□□□ -1.25
Knop1-204ENSMUST00000106550 Gm40193A0A1B0GT39 78 aa7.24□□□□□ -1.25
Knop1-204ENSMUST00000106550 FlncQ8VHX6 2726 aaKnown RBP7.24□□□□□ -1.25
Knop1-204ENSMUST00000106550 A930033H14RikG5E8X6 103 aa7.23□□□□□ -1.25
Knop1-204ENSMUST00000106550 Celsr2Q9R0M0 2920 aa7.21□□□□□ -1.26
Knop1-204ENSMUST00000106550 Tenm3Q9WTS6 2715 aa7.21□□□□□ -1.26
Knop1-204ENSMUST00000106550 Col6a3E9PWQ3 3284 aa7.18□□□□□ -1.26
Knop1-204ENSMUST00000106550 2310079G19RikQ9D6L6 185 aa7.17□□□□□ -1.26
Knop1-204ENSMUST00000106550 B930094E09RikQ8C4T2 136 aa7.16□□□□□ -1.26
Knop1-204ENSMUST00000106550 Pdzd2E9Q1M1 2796 aa7.16□□□□□ -1.26
Knop1-204ENSMUST00000106550 Trank1Q8BV79 2999 aa7.11□□□□□ -1.27
Knop1-204ENSMUST00000106550 Chd9Q8BYH8 2885 aa7.09□□□□□ -1.27
Knop1-204ENSMUST00000106550 Gm9736A0A1W2P7N1 277 aa7.07□□□□□ -1.28
Knop1-204ENSMUST00000106550 Gm9112A2AI92 75 aa7.07□□□□□ -1.28
Knop1-204ENSMUST00000106550 VcanQ62059 3357 aa7.06□□□□□ -1.28
Knop1-204ENSMUST00000106550 Nf1Q04690 2841 aa7.06□□□□□ -1.28
Knop1-204ENSMUST00000106550 Gm17416Q30KP4 66 aa7.04□□□□□ -1.28
Knop1-204ENSMUST00000106550 Vps13cQ8BX70 3748 aa7.04□□□□□ -1.28
Knop1-204ENSMUST00000106550 Dchs1E9PVD3 3291 aa7.01□□□□□ -1.29
Knop1-204ENSMUST00000106550 Wdfy3Q6VNB8 3508 aa7□□□□□ -1.29
Knop1-204ENSMUST00000106550 Myo15aQ9QZZ4 3511 aa6.96□□□□□ -1.29
Knop1-204ENSMUST00000106550 RelnQ60841 3461 aa6.96□□□□□ -1.29
Knop1-204ENSMUST00000106550 LrbaQ9ESE1 2856 aa6.96□□□□□ -1.3
Knop1-204ENSMUST00000106550 Akap9Q70FJ1 3797 aa6.93□□□□□ -1.3
Knop1-204ENSMUST00000106550 SpegQ62407 3262 aa6.93□□□□□ -1.3
Knop1-204ENSMUST00000106550 2210017I01RikA0A0A6YVV1 95 aa6.92□□□□□ -1.3
Knop1-204ENSMUST00000106550 Tenm2Q9WTS5 2764 aa6.88□□□□□ -1.31
Knop1-204ENSMUST00000106550 Tenm1Q9WTS4 2731 aa6.87□□□□□ -1.31
Knop1-204ENSMUST00000106550 DmdP11531 3678 aa6.83□□□□□ -1.32
Knop1-204ENSMUST00000106550 Helz2E9QAM5 2947 aaKnown RBP6.83□□□□□ -1.32
Knop1-204ENSMUST00000106550 Gm17402F6Z0L5 76 aa6.82□□□□□ -1.32
Knop1-204ENSMUST00000106550 Muc5acE9QAQ8 3455 aa6.78□□□□□ -1.32
Knop1-204ENSMUST00000106550 Prm2P07978 107 aa6.74□□□□□ -1.33
Knop1-204ENSMUST00000106550 Gm11939A2A592 99 aa6.73□□□□□ -1.33
Knop1-204ENSMUST00000106550 Gm9918Q8BUR5 174 aa6.72□□□□□ -1.33
Knop1-204ENSMUST00000106550 Gm10318A0A1W2P728 225 aa6.68□□□□□ -1.34
Knop1-204ENSMUST00000106550 Krtap19-5O08632 62 aa6.67□□□□□ -1.34
Knop1-204ENSMUST00000106550 Csmd1Q923L3 3564 aa6.65□□□□□ -1.34
Knop1-204ENSMUST00000106550 OtogO55225 2910 aa6.65□□□□□ -1.35
Knop1-204ENSMUST00000106550 Gm19668J3QMD1 248 aa6.6□□□□□ -1.35
Knop1-204ENSMUST00000106550 Krtap13-1Q8K198 168 aa6.6□□□□□ -1.35
Knop1-204ENSMUST00000106550 Smg1Q8BKX6 3658 aaKnown RBP6.55□□□□□ -1.36
Knop1-204ENSMUST00000106550 Crct1Q6PAI5 102 aa6.54□□□□□ -1.36
Knop1-204ENSMUST00000106550 Lama5Q61001 3718 aa6.54□□□□□ -1.36
Knop1-204ENSMUST00000106550 VwfQ8CIZ8 2813 aa6.52□□□□□ -1.37
Knop1-204ENSMUST00000106550 Megf8P60882 2789 aa6.52□□□□□ -1.37
Knop1-204ENSMUST00000106550 Fbn1Q61554 2873 aaKnown RBP6.51□□□□□ -1.37
Knop1-204ENSMUST00000106550 Krtap3-2Q9D638 99 aa6.5□□□□□ -1.37
Knop1-204ENSMUST00000106550 Krtap3-3Q9D7P0 99 aa6.5□□□□□ -1.37
Knop1-204ENSMUST00000106550 Ank2Q8C8R3 3898 aa6.49□□□□□ -1.37
Knop1-204ENSMUST00000106550 Krtap3-1A2A591 98 aa6.47□□□□□ -1.37
Knop1-204ENSMUST00000106550 Zfhx4Q9JJN2 3550 aa6.41□□□□□ -1.38
Knop1-204ENSMUST00000106550 SpenQ62504 3644 aaKnown RBP6.38□□□□□ -1.39
Knop1-204ENSMUST00000106550 Gm884A2A9H6 3643 aa6.36□□□□□ -1.39
Knop1-204ENSMUST00000106550 4933428G20RikQ9D3X4 101 aa6.34□□□□□ -1.39
Knop1-204ENSMUST00000106550 Cmya5Q70KF4 3739 aa6.22□□□□□ -1.41
Knop1-204ENSMUST00000106550 Huwe1Q7TMY8 4377 aaKnown RBP6.17□□□□□ -1.42
Knop1-204ENSMUST00000106550 Dnah14A0A140LIJ4 4489 aa6.17□□□□□ -1.42
Knop1-204ENSMUST00000106550 Col7a1Q63870 2944 aa6.16□□□□□ -1.42
Knop1-204ENSMUST00000106550 Svep1A2AVA0 3567 aa6.15□□□□□ -1.42
Knop1-204ENSMUST00000106550 Krtap1-5A2A590 122 aa6.06□□□□□ -1.44
Knop1-204ENSMUST00000106550 Muc6Q80T03 2850 aa6.03□□□□□ -1.44
Knop1-204ENSMUST00000106550 Dnah10D3YYQ8 4591 aa6.01□□□□□ -1.45
Knop1-204ENSMUST00000106550 Csmd2V9GX34 3611 aa6□□□□□ -1.45
Knop1-204ENSMUST00000106550 Sprr2a3Q4KL71 83 aa6□□□□□ -1.45
Knop1-204ENSMUST00000106550 Sprr2a1Q9CQK8 83 aa6□□□□□ -1.45
Knop1-204ENSMUST00000106550 Dnah5Q8VHE6 4621 aa5.98□□□□□ -1.45
Knop1-204ENSMUST00000106550 Gm6358A0A087WPH4 74 aa5.96□□□□□ -1.46
Knop1-204ENSMUST00000106550 Krtap19-9aF8WH65 55 aa5.95□□□□□ -1.46
Knop1-204ENSMUST00000106550 Krtap1-4Q3V2D6 188 aa5.89□□□□□ -1.47
Knop1-204ENSMUST00000106550 Vps13dB1ART2 4390 aa5.88□□□□□ -1.47
Knop1-204ENSMUST00000106550 Muc4Q8JZM8 3443 aa5.88□□□□□ -1.47
Knop1-204ENSMUST00000106550 LystP97412 3788 aa5.87□□□□□ -1.47
Knop1-204ENSMUST00000106550 Dnah17Q69Z23 4481 aa5.87□□□□□ -1.47
Knop1-204ENSMUST00000106550 Stard9Q80TF6 4561 aa5.86□□□□□ -1.47
Knop1-204ENSMUST00000106550 LorP18165 486 aa5.84□□□□□ -1.48
Knop1-204ENSMUST00000106550 Gm18596A0A1W2P860 280 aa5.83□□□□□ -1.48
Knop1-204ENSMUST00000106550 Krtap8-1O08633 61 aa5.83□□□□□ -1.48
Knop1-204ENSMUST00000106550 Krtap7-1Q9D3I6 87 aa5.83□□□□□ -1.48
Knop1-204ENSMUST00000106550 PlecQ9QXS1 4691 aaKnown RBP5.83□□□□□ -1.48
Knop1-204ENSMUST00000106550 Krtap19-9bQ99NG9 58 aa5.75□□□□□ -1.49
Knop1-204ENSMUST00000106550 Gm19402J3QJV4 266 aa5.73□□□□□ -1.49
Knop1-204ENSMUST00000106550 Krtap12-1Q9Z287 130 aa5.69□□□□□ -1.5
Knop1-204ENSMUST00000106550 Dnah11E9Q7N9 4488 aa5.65□□□□□ -1.5
Knop1-204ENSMUST00000106550 Dync2h1Q45VK7 4306 aa5.63□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 85.4 ms