RNA–Protein interactions for RNA: ENSMUST00000105840.7

Usp48-205, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp48, Length 5,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-205ENSMUST00000105840 Gm2696A0A1W2P709 240 aa11.55□□□□□ -0.56
Usp48-205ENSMUST00000105840 Gm40193A0A1B0GT39 78 aa11.54□□□□□ -0.56
Usp48-205ENSMUST00000105840 FryE9Q8I9 3020 aa11.53□□□□□ -0.56
Usp48-205ENSMUST00000105840 Itpr2Q9Z329 2701 aa11.53□□□□□ -0.56
Usp48-205ENSMUST00000105840 Zzef1Q5SSH7 2924 aa11.5□□□□□ -0.57
Usp48-205ENSMUST00000105840 Wdfy4E9Q2M9 3149 aa11.48□□□□□ -0.57
Usp48-205ENSMUST00000105840 FcgbpE9Q0B5 2583 aa11.48□□□□□ -0.57
Usp48-205ENSMUST00000105840 Lama1P19137 3084 aa11.47□□□□□ -0.57
Usp48-205ENSMUST00000105840 Brca2P97929 3329 aa11.46□□□□□ -0.57
Usp48-205ENSMUST00000105840 Igfn1Q3KNY0 2849 aa11.42□□□□□ -0.58
Usp48-205ENSMUST00000105840 Zfhx3Q61329 3726 aa11.4□□□□□ -0.58
Usp48-205ENSMUST00000105840 Gm5965D3Z724 196 aa11.4□□□□□ -0.59
Usp48-205ENSMUST00000105840 Tnp1P10856 55 aa11.38□□□□□ -0.59
Usp48-205ENSMUST00000105840 2310079G19RikQ9D6L6 185 aa11.34□□□□□ -0.59
Usp48-205ENSMUST00000105840 A930033H14RikG5E8X6 103 aa11.33□□□□□ -0.6
Usp48-205ENSMUST00000105840 NbeaQ9EPN1 2936 aa11.3□□□□□ -0.6
Usp48-205ENSMUST00000105840 Dmxl2Q8BPN8 3032 aa11.27□□□□□ -0.61
Usp48-205ENSMUST00000105840 Celsr2Q9R0M0 2920 aa11.27□□□□□ -0.61
Usp48-205ENSMUST00000105840 B930094E09RikQ8C4T2 136 aa11.25□□□□□ -0.61
Usp48-205ENSMUST00000105840 2310057N15RikQ9D6T8 200 aa11.19□□□□□ -0.62
Usp48-205ENSMUST00000105840 Dchs2A0A0A6YW72 3346 aa11.18□□□□□ -0.62
Usp48-205ENSMUST00000105840 FlncQ8VHX6 2726 aaKnown RBP11.14□□□□□ -0.63
Usp48-205ENSMUST00000105840 Prm2P07978 107 aa11.12□□□□□ -0.63
Usp48-205ENSMUST00000105840 Col6a3E9PWQ3 3284 aa11.1□□□□□ -0.63
Usp48-205ENSMUST00000105840 Chd9Q8BYH8 2885 aa11.06□□□□□ -0.64
Usp48-205ENSMUST00000105840 Pdzd2E9Q1M1 2796 aa11.05□□□□□ -0.64
Usp48-205ENSMUST00000105840 LrbaQ9ESE1 2856 aa11.02□□□□□ -0.65
Usp48-205ENSMUST00000105840 Trank1Q8BV79 2999 aa11.02□□□□□ -0.65
Usp48-205ENSMUST00000105840 SpegQ62407 3262 aa11□□□□□ -0.65
Usp48-205ENSMUST00000105840 Tenm3Q9WTS6 2715 aa11□□□□□ -0.65
Usp48-205ENSMUST00000105840 Dchs1E9PVD3 3291 aa10.93□□□□□ -0.66
Usp48-205ENSMUST00000105840 VcanQ62059 3357 aa10.9□□□□□ -0.66
Usp48-205ENSMUST00000105840 Nf1Q04690 2841 aa10.87□□□□□ -0.67
Usp48-205ENSMUST00000105840 Helz2E9QAM5 2947 aaKnown RBP10.84□□□□□ -0.67
Usp48-205ENSMUST00000105840 Tenm4Q3UHK6 2771 aa10.82□□□□□ -0.68
Usp48-205ENSMUST00000105840 Gm17416Q30KP4 66 aa10.81□□□□□ -0.68
Usp48-205ENSMUST00000105840 RelnQ60841 3461 aa10.81□□□□□ -0.68
Usp48-205ENSMUST00000105840 Myo15aQ9QZZ4 3511 aa10.79□□□□□ -0.68
Usp48-205ENSMUST00000105840 Wdfy3Q6VNB8 3508 aa10.72□□□□□ -0.69
Usp48-205ENSMUST00000105840 Vps13cQ8BX70 3748 aa10.71□□□□□ -0.69
Usp48-205ENSMUST00000105840 Akap9Q70FJ1 3797 aa10.69□□□□□ -0.7
Usp48-205ENSMUST00000105840 2210017I01RikA0A0A6YVV1 95 aa10.67□□□□□ -0.7
Usp48-205ENSMUST00000105840 Gm9736A0A1W2P7N1 277 aa10.63□□□□□ -0.71
Usp48-205ENSMUST00000105840 Gm17402F6Z0L5 76 aa10.61□□□□□ -0.71
Usp48-205ENSMUST00000105840 Csmd1Q923L3 3564 aa10.58□□□□□ -0.72
Usp48-205ENSMUST00000105840 Tenm1Q9WTS4 2731 aa10.57□□□□□ -0.72
Usp48-205ENSMUST00000105840 Muc5acE9QAQ8 3455 aa10.48□□□□□ -0.73
Usp48-205ENSMUST00000105840 DmdP11531 3678 aa10.47□□□□□ -0.73
Usp48-205ENSMUST00000105840 Tenm2Q9WTS5 2764 aa10.39□□□□□ -0.75
Usp48-205ENSMUST00000105840 Gm11939A2A592 99 aa10.38□□□□□ -0.75
Usp48-205ENSMUST00000105840 Megf8P60882 2789 aa10.25□□□□□ -0.77
Usp48-205ENSMUST00000105840 Gm9918Q8BUR5 174 aa10.24□□□□□ -0.77
Usp48-205ENSMUST00000105840 Smg1Q8BKX6 3658 aaKnown RBP10.21□□□□□ -0.77
Usp48-205ENSMUST00000105840 Krtap3-2Q9D638 99 aa10.2□□□□□ -0.78
Usp48-205ENSMUST00000105840 Krtap3-3Q9D7P0 99 aa10.2□□□□□ -0.78
Usp48-205ENSMUST00000105840 Gm19668J3QMD1 248 aa10.18□□□□□ -0.78
Usp48-205ENSMUST00000105840 OtogO55225 2910 aa10.16□□□□□ -0.78
Usp48-205ENSMUST00000105840 SpenQ62504 3644 aaKnown RBP10.14□□□□□ -0.79
Usp48-205ENSMUST00000105840 Gm10318A0A1W2P728 225 aa10.11□□□□□ -0.79
Usp48-205ENSMUST00000105840 Krtap13-1Q8K198 168 aa10.1□□□□□ -0.79
Usp48-205ENSMUST00000105840 Krtap3-1A2A591 98 aa10.06□□□□□ -0.8
Usp48-205ENSMUST00000105840 Zfhx4Q9JJN2 3550 aa10.03□□□□□ -0.8
Usp48-205ENSMUST00000105840 VwfQ8CIZ8 2813 aa10.01□□□□□ -0.81
Usp48-205ENSMUST00000105840 4933428G20RikQ9D3X4 101 aa9.98□□□□□ -0.81
Usp48-205ENSMUST00000105840 Lama5Q61001 3718 aa9.97□□□□□ -0.81
Usp48-205ENSMUST00000105840 Krtap19-5O08632 62 aa9.91□□□□□ -0.82
Usp48-205ENSMUST00000105840 Crct1Q6PAI5 102 aa9.81□□□□□ -0.84
Usp48-205ENSMUST00000105840 Gm884A2A9H6 3643 aa9.78□□□□□ -0.84
Usp48-205ENSMUST00000105840 Fbn1Q61554 2873 aaKnown RBP9.76□□□□□ -0.85
Usp48-205ENSMUST00000105840 Cmya5Q70KF4 3739 aa9.75□□□□□ -0.85
Usp48-205ENSMUST00000105840 Svep1A2AVA0 3567 aa9.58□□□□□ -0.88
Usp48-205ENSMUST00000105840 Ank2Q8C8R3 3898 aa9.5□□□□□ -0.89
Usp48-205ENSMUST00000105840 Krtap7-1Q9D3I6 87 aa9.5□□□□□ -0.89
Usp48-205ENSMUST00000105840 Col7a1Q63870 2944 aa9.35□□□□□ -0.91
Usp48-205ENSMUST00000105840 Sprr2a3Q4KL71 83 aa9.34□□□□□ -0.91
Usp48-205ENSMUST00000105840 Sprr2a1Q9CQK8 83 aa9.34□□□□□ -0.91
Usp48-205ENSMUST00000105840 Muc4Q8JZM8 3443 aa9.33□□□□□ -0.92
Usp48-205ENSMUST00000105840 Krtap1-5A2A590 122 aa9.25□□□□□ -0.93
Usp48-205ENSMUST00000105840 Csmd2V9GX34 3611 aa9.23□□□□□ -0.93
Usp48-205ENSMUST00000105840 Dnah14A0A140LIJ4 4489 aa9.22□□□□□ -0.93
Usp48-205ENSMUST00000105840 LystP97412 3788 aa9.15□□□□□ -0.94
Usp48-205ENSMUST00000105840 Muc6Q80T03 2850 aa9.11□□□□□ -0.95
Usp48-205ENSMUST00000105840 Dnah10D3YYQ8 4591 aa9.11□□□□□ -0.95
Usp48-205ENSMUST00000105840 Huwe1Q7TMY8 4377 aaKnown RBP9.1□□□□□ -0.95
Usp48-205ENSMUST00000105840 Gm6358A0A087WPH4 74 aa9.07□□□□□ -0.96
Usp48-205ENSMUST00000105840 Gm19402J3QJV4 266 aa9.03□□□□□ -0.96
Usp48-205ENSMUST00000105840 Krtap19-9aF8WH65 55 aa9.01□□□□□ -0.97
Usp48-205ENSMUST00000105840 Dnah5Q8VHE6 4621 aa8.97□□□□□ -0.97
Usp48-205ENSMUST00000105840 Krtap1-4Q3V2D6 188 aa8.96□□□□□ -0.98
Usp48-205ENSMUST00000105840 Krtap19-9bQ99NG9 58 aa8.83□□□□□ -1
Usp48-205ENSMUST00000105840 CubnQ9JLB4 3623 aa8.79□□□□□ -1
Usp48-205ENSMUST00000105840 Stard9Q80TF6 4561 aa8.76□□□□□ -1.01
Usp48-205ENSMUST00000105840 Csmd3Q80T79 3707 aa8.76□□□□□ -1.01
Usp48-205ENSMUST00000105840 Dnah17Q69Z23 4481 aa8.74□□□□□ -1.01
Usp48-205ENSMUST00000105840 Vps13dB1ART2 4390 aa8.72□□□□□ -1.01
Usp48-205ENSMUST00000105840 Krtap8-1O08633 61 aa8.67□□□□□ -1.02
Usp48-205ENSMUST00000105840 Hspg2Q05793 3707 aaKnown RBP8.66□□□□□ -1.02
Usp48-205ENSMUST00000105840 PlecQ9QXS1 4691 aaKnown RBP8.64□□□□□ -1.03
Usp48-205ENSMUST00000105840 Krtap12-1Q9Z287 130 aa8.63□□□□□ -1.03
Usp48-205ENSMUST00000105840 LorP18165 486 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 80.5 ms