RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 HttP42859 3119 aa3.74□□□□□ -1.81
Scn3a-202ENSMUST00000100069 FcgbpE9Q0B5 2583 aa3.74□□□□□ -1.81
Scn3a-202ENSMUST00000100069 TgO08710 2766 aa3.74□□□□□ -1.81
Scn3a-202ENSMUST00000100069 Celsr1O35161 3034 aa3.74□□□□□ -1.81
Scn3a-202ENSMUST00000100069 Igfn1Q3KNY0 2849 aa3.72□□□□□ -1.81
Scn3a-202ENSMUST00000100069 Srrm2Q8BTI8 2703 aaKnown RBP3.72□□□□□ -1.81
Scn3a-202ENSMUST00000100069 AspmQ8CJ27 3122 aa3.68□□□□□ -1.82
Scn3a-202ENSMUST00000100069 Zzef1Q5SSH7 2924 aa3.67□□□□□ -1.82
Scn3a-202ENSMUST00000100069 B930094E09RikQ8C4T2 136 aa3.67□□□□□ -1.82
Scn3a-202ENSMUST00000100069 Gm9507D3Z5T3 223 aa3.66□□□□□ -1.82
Scn3a-202ENSMUST00000100069 Szt2A2A9C3 3431 aa3.66□□□□□ -1.82
Scn3a-202ENSMUST00000100069 Gm17402F6Z0L5 76 aa3.65□□□□□ -1.82
Scn3a-202ENSMUST00000100069 Adgrg4B7ZCC9 3073 aa3.64□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Gm20537G3UYK7 97 aa3.64□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Nf1Q04690 2841 aa3.64□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Vps13cQ8BX70 3748 aa3.63□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Lama1P19137 3084 aa3.63□□□□□ -1.83
Scn3a-202ENSMUST00000100069 A930033H14RikG5E8X6 103 aa3.63□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Wdfy4E9Q2M9 3149 aa3.63□□□□□ -1.83
Scn3a-202ENSMUST00000100069 NbeaQ9EPN1 2936 aa3.63□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Gm17416Q30KP4 66 aa3.62□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Brca2P97929 3329 aa3.61□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Lrrc37aB1AWG4 3215 aa3.6□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Celsr2Q9R0M0 2920 aa3.59□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Pdzd2E9Q1M1 2796 aa3.59□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Dmxl2Q8BPN8 3032 aa3.59□□□□□ -1.83
Scn3a-202ENSMUST00000100069 Trank1Q8BV79 2999 aa3.58□□□□□ -1.84
Scn3a-202ENSMUST00000100069 Tenm1Q9WTS4 2731 aa3.57□□□□□ -1.84
Scn3a-202ENSMUST00000100069 Krtap10-4Q08EG8 221 aa3.57□□□□□ -1.84
Scn3a-202ENSMUST00000100069 Akap9Q70FJ1 3797 aa3.56□□□□□ -1.84
Scn3a-202ENSMUST00000100069 LrbaQ9ESE1 2856 aa3.55□□□□□ -1.84
Scn3a-202ENSMUST00000100069 Dchs2A0A0A6YW72 3346 aa3.55□□□□□ -1.84
Scn3a-202ENSMUST00000100069 Tenm3Q9WTS6 2715 aa3.55□□□□□ -1.84
Scn3a-202ENSMUST00000100069 Chd9Q8BYH8 2885 aa3.55□□□□□ -1.84
Scn3a-202ENSMUST00000100069 Tenm4Q3UHK6 2771 aa3.54□□□□□ -1.84
Scn3a-202ENSMUST00000100069 2310079G19RikQ9D6L6 185 aa3.54□□□□□ -1.84
Scn3a-202ENSMUST00000100069 Krtap10-10A0A1W2P7T6 217 aa3.53□□□□□ -1.84
Scn3a-202ENSMUST00000100069 4933428G20RikQ9D3X4 101 aa3.51□□□□□ -1.85
Scn3a-202ENSMUST00000100069 2210017I01RikA0A0A6YVV1 95 aa3.5□□□□□ -1.85
Scn3a-202ENSMUST00000100069 A0A1Y7VJ07 166 aa3.5□□□□□ -1.85
Scn3a-202ENSMUST00000100069 Col6a3E9PWQ3 3284 aa3.5□□□□□ -1.85
Scn3a-202ENSMUST00000100069 Myo15aQ9QZZ4 3511 aa3.49□□□□□ -1.85
Scn3a-202ENSMUST00000100069 SpegQ62407 3262 aa3.48□□□□□ -1.85
Scn3a-202ENSMUST00000100069 VcanQ62059 3357 aa3.47□□□□□ -1.85
Scn3a-202ENSMUST00000100069 Gm2696A0A1W2P709 240 aa3.47□□□□□ -1.85
Scn3a-202ENSMUST00000100069 DmdP11531 3678 aa3.47□□□□□ -1.85
Scn3a-202ENSMUST00000100069 Wdfy3Q6VNB8 3508 aa3.46□□□□□ -1.86
Scn3a-202ENSMUST00000100069 Megf8P60882 2789 aa3.46□□□□□ -1.86
Scn3a-202ENSMUST00000100069 Dchs1E9PVD3 3291 aa3.44□□□□□ -1.86
Scn3a-202ENSMUST00000100069 Csmd1Q923L3 3564 aa3.44□□□□□ -1.86
Scn3a-202ENSMUST00000100069 Helz2E9QAM5 2947 aaKnown RBP3.43□□□□□ -1.86
Scn3a-202ENSMUST00000100069 A0A1Y7VJH8 109 aa3.39□□□□□ -1.87
Scn3a-202ENSMUST00000100069 RelnQ60841 3461 aa3.39□□□□□ -1.87
Scn3a-202ENSMUST00000100069 SpenQ62504 3644 aaKnown RBP3.39□□□□□ -1.87
Scn3a-202ENSMUST00000100069 A030005K14RikA0A1Y7VNY1 122 aa3.38□□□□□ -1.87
Scn3a-202ENSMUST00000100069 Krtap28-10A0A1Y7VP58 119 aa3.38□□□□□ -1.87
Scn3a-202ENSMUST00000100069 Gm19668J3QMD1 248 aa3.38□□□□□ -1.87
Scn3a-202ENSMUST00000100069 Smg1Q8BKX6 3658 aaKnown RBP3.37□□□□□ -1.87
Scn3a-202ENSMUST00000100069 Krtap28-13A0A087WQP5 138 aa3.37□□□□□ -1.87
Scn3a-202ENSMUST00000100069 Cmya5Q70KF4 3739 aa3.35□□□□□ -1.87
Scn3a-202ENSMUST00000100069 Zfhx4Q9JJN2 3550 aa3.34□□□□□ -1.87
Scn3a-202ENSMUST00000100069 Lama5Q61001 3718 aa3.32□□□□□ -1.88
Scn3a-202ENSMUST00000100069 Gm884A2A9H6 3643 aa3.32□□□□□ -1.88
Scn3a-202ENSMUST00000100069 Gm7544A0A1Y7VJ58 118 aa3.31□□□□□ -1.88
Scn3a-202ENSMUST00000100069 Ank2Q8C8R3 3898 aa3.3□□□□□ -1.88
Scn3a-202ENSMUST00000100069 Muc5acE9QAQ8 3455 aa3.29□□□□□ -1.88
Scn3a-202ENSMUST00000100069 VwfQ8CIZ8 2813 aa3.28□□□□□ -1.88
Scn3a-202ENSMUST00000100069 OtogO55225 2910 aa3.27□□□□□ -1.89
Scn3a-202ENSMUST00000100069 Fbn1Q61554 2873 aaKnown RBP3.24□□□□□ -1.89
Scn3a-202ENSMUST00000100069 Tenm2Q9WTS5 2764 aa3.18□□□□□ -1.9
Scn3a-202ENSMUST00000100069 Gm11939A2A592 99 aa3.18□□□□□ -1.9
Scn3a-202ENSMUST00000100069 Krtap13-1Q8K198 168 aa3.18□□□□□ -1.9
Scn3a-202ENSMUST00000100069 Gm9918Q8BUR5 174 aa3.17□□□□□ -1.9
Scn3a-202ENSMUST00000100069 Gm9736A0A1W2P7N1 277 aa3.16□□□□□ -1.9
Scn3a-202ENSMUST00000100069 Ryr1E9PZQ0 5035 aa3.15□□□□□ -1.91
Scn3a-202ENSMUST00000100069 Krtap3-1A2A591 98 aa3.12□□□□□ -1.91
Scn3a-202ENSMUST00000100069 A030005L19RikA0A1Y7VIU2 113 aa3.12□□□□□ -1.91
Scn3a-202ENSMUST00000100069 Csmd2V9GX34 3611 aa3.11□□□□□ -1.91
Scn3a-202ENSMUST00000100069 Svep1A2AVA0 3567 aa3.11□□□□□ -1.91
Scn3a-202ENSMUST00000100069 Krtap19-5O08632 62 aa3.08□□□□□ -1.92
Scn3a-202ENSMUST00000100069 LystP97412 3788 aa3.07□□□□□ -1.92
Scn3a-202ENSMUST00000100069 Krtap3-2Q9D638 99 aa3.06□□□□□ -1.92
Scn3a-202ENSMUST00000100069 Krtap3-3Q9D7P0 99 aa3.06□□□□□ -1.92
Scn3a-202ENSMUST00000100069 Col7a1Q63870 2944 aa3.04□□□□□ -1.92
Scn3a-202ENSMUST00000100069 A030014E15RikA0A1Y7VJV2 120 aa3.04□□□□□ -1.92
Scn3a-202ENSMUST00000100069 Xirp2Q4U4S6 3784 aa3□□□□□ -1.93
Scn3a-202ENSMUST00000100069 Muc6Q80T03 2850 aa3□□□□□ -1.93
Scn3a-202ENSMUST00000100069 Muc4Q8JZM8 3443 aa2.98□□□□□ -1.93
Scn3a-202ENSMUST00000100069 Krtap1-5A2A590 122 aa2.98□□□□□ -1.93
Scn3a-202ENSMUST00000100069 Krtap19-9aF8WH65 55 aa2.98□□□□□ -1.93
Scn3a-202ENSMUST00000100069 Sprr2a3Q4KL71 83 aa2.98□□□□□ -1.93
Scn3a-202ENSMUST00000100069 Sprr2a1Q9CQK8 83 aa2.98□□□□□ -1.93
Scn3a-202ENSMUST00000100069 BsnO88737 3942 aa2.96□□□□□ -1.94
Scn3a-202ENSMUST00000100069 Csmd3Q80T79 3707 aa2.95□□□□□ -1.94
Scn3a-202ENSMUST00000100069 Krtap7-1Q9D3I6 87 aa2.95□□□□□ -1.94
Scn3a-202ENSMUST00000100069 Krtap8-1O08633 61 aa2.95□□□□□ -1.94
Scn3a-202ENSMUST00000100069 Gm6358A0A087WPH4 74 aa2.94□□□□□ -1.94
Scn3a-202ENSMUST00000100069 Krtap19-9bQ99NG9 58 aa2.93□□□□□ -1.94
Scn3a-202ENSMUST00000100069 Gm10318A0A1W2P728 225 aa2.93□□□□□ -1.94
Scn3a-202ENSMUST00000100069 Crct1Q6PAI5 102 aa2.93□□□□□ -1.94
Retrieved 100 of 22,080 RNA–protein pairs in 124.2 ms