RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Tenm1Q9WTS4 2731 aa6.44□□□□□ -1.38
Col6a3-202ENSMUST00000097653 SpegQ62407 3262 aa6.42□□□□□ -1.38
Col6a3-202ENSMUST00000097653 Gm19426M0QWC7 77 aa6.41□□□□□ -1.38
Col6a3-202ENSMUST00000097653 DmdP11531 3678 aa6.4□□□□□ -1.38
Col6a3-202ENSMUST00000097653 Gm40193A0A1B0GT39 78 aa6.39□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm7138L7N2C3 230 aa6.38□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm3238W4VSP7 230 aa6.38□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm9112A2AI92 75 aa6.37□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm16253D3Z167 63 aa6.37□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Wdfy3Q6VNB8 3508 aa6.34□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm5767A0A0J9YTU8 78 aa6.33□□□□□ -1.4
Col6a3-202ENSMUST00000097653 Gm7137J3QMW1 236 aa6.31□□□□□ -1.4
Col6a3-202ENSMUST00000097653 Krtap29-1A2A5X4 342 aa6.29□□□□□ -1.4
Col6a3-202ENSMUST00000097653 2310050C09RikG5E8Z3 280 aa6.28□□□□□ -1.4
Col6a3-202ENSMUST00000097653 Helz2E9QAM5 2947 aaKnown RBP6.27□□□□□ -1.41
Col6a3-202ENSMUST00000097653 Tenm3Q9WTS6 2715 aa6.25□□□□□ -1.41
Col6a3-202ENSMUST00000097653 SpenQ62504 3644 aaKnown RBP6.25□□□□□ -1.41
Col6a3-202ENSMUST00000097653 SmcpP15265 143 aa6.23□□□□□ -1.41
Col6a3-202ENSMUST00000097653 RelnQ60841 3461 aa6.22□□□□□ -1.41
Col6a3-202ENSMUST00000097653 Gm17349F7BGH6 99 aa6.21□□□□□ -1.41
Col6a3-202ENSMUST00000097653 Gm9508A0A1W2P7W0 230 aa6.21□□□□□ -1.42
Col6a3-202ENSMUST00000097653 OtogO55225 2910 aa6.2□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Csmd1Q923L3 3564 aa6.2□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Rps29P62274 56 aa6.19□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Smg1Q8BKX6 3658 aaKnown RBP6.18□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Cmya5Q70KF4 3739 aa6.18□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Tnp1P10856 55 aa6.18□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Tenm4Q3UHK6 2771 aa6.16□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Gm36176A0A1W2P8D5 158 aa6.15□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Gm2310J3QNJ2 377 aa6.15□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Lama5Q61001 3718 aa6.12□□□□□ -1.43
Col6a3-202ENSMUST00000097653 Krtap13O88375 197 aa6.11□□□□□ -1.43
Col6a3-202ENSMUST00000097653 Muc5acE9QAQ8 3455 aa6.05□□□□□ -1.44
Col6a3-202ENSMUST00000097653 Gm21887J3QQ04 176 aa6.05□□□□□ -1.44
Col6a3-202ENSMUST00000097653 VwfQ8CIZ8 2813 aa6.02□□□□□ -1.45
Col6a3-202ENSMUST00000097653 Gm884A2A9H6 3643 aa6.01□□□□□ -1.45
Col6a3-202ENSMUST00000097653 Krtap14O08640 167 aa6.01□□□□□ -1.45
Col6a3-202ENSMUST00000097653 Zfhx4Q9JJN2 3550 aa5.97□□□□□ -1.45
Col6a3-202ENSMUST00000097653 Fbn1Q61554 2873 aaKnown RBP5.97□□□□□ -1.45
Col6a3-202ENSMUST00000097653 2310061N02RikQ9D6S9 174 aa5.96□□□□□ -1.46
Col6a3-202ENSMUST00000097653 Tnp2P11378 117 aa5.93□□□□□ -1.46
Col6a3-202ENSMUST00000097653 Megf8P60882 2789 aa5.93□□□□□ -1.46
Col6a3-202ENSMUST00000097653 Ank2Q8C8R3 3898 aa5.93□□□□□ -1.46
Col6a3-202ENSMUST00000097653 Gm9507D3Z5T3 223 aa5.88□□□□□ -1.47
Col6a3-202ENSMUST00000097653 Col7a1Q63870 2944 aa5.88□□□□□ -1.47
Col6a3-202ENSMUST00000097653 D6Ertd527eA0A0N4SWI3 464 aa5.87□□□□□ -1.47
Col6a3-202ENSMUST00000097653 Csmd2V9GX34 3611 aa5.85□□□□□ -1.47
Col6a3-202ENSMUST00000097653 Tenm2Q9WTS5 2764 aa5.82□□□□□ -1.48
Col6a3-202ENSMUST00000097653 Krtap10-4Q08EG8 221 aa5.77□□□□□ -1.49
Col6a3-202ENSMUST00000097653 Gm5965D3Z724 196 aa5.74□□□□□ -1.49
Col6a3-202ENSMUST00000097653 2310057N15RikQ9D6T8 200 aa5.73□□□□□ -1.49
Col6a3-202ENSMUST00000097653 Krtap10-10A0A1W2P7T6 217 aa5.68□□□□□ -1.5
Col6a3-202ENSMUST00000097653 Svep1A2AVA0 3567 aa5.67□□□□□ -1.5
Col6a3-202ENSMUST00000097653 Prm2P07978 107 aa5.67□□□□□ -1.5
Col6a3-202ENSMUST00000097653 Gm20537G3UYK7 97 aa5.64□□□□□ -1.51
Col6a3-202ENSMUST00000097653 B930094E09RikQ8C4T2 136 aa5.63□□□□□ -1.51
Col6a3-202ENSMUST00000097653 Gm17416Q30KP4 66 aa5.61□□□□□ -1.51
Col6a3-202ENSMUST00000097653 Gm17402F6Z0L5 76 aa5.61□□□□□ -1.51
Col6a3-202ENSMUST00000097653 Muc4Q8JZM8 3443 aa5.6□□□□□ -1.51
Col6a3-202ENSMUST00000097653 LystP97412 3788 aa5.58□□□□□ -1.52
Col6a3-202ENSMUST00000097653 Gm2696A0A1W2P709 240 aa5.58□□□□□ -1.52
Col6a3-202ENSMUST00000097653 Muc6Q80T03 2850 aa5.57□□□□□ -1.52
Col6a3-202ENSMUST00000097653 4933428G20RikQ9D3X4 101 aa5.57□□□□□ -1.52
Col6a3-202ENSMUST00000097653 A930033H14RikG5E8X6 103 aa5.54□□□□□ -1.52
Col6a3-202ENSMUST00000097653 2310079G19RikQ9D6L6 185 aa5.5□□□□□ -1.53
Col6a3-202ENSMUST00000097653 Xirp2Q4U4S6 3784 aa5.45□□□□□ -1.54
Col6a3-202ENSMUST00000097653 CubnQ9JLB4 3623 aa5.43□□□□□ -1.54
Col6a3-202ENSMUST00000097653 BsnO88737 3942 aa5.38□□□□□ -1.55
Col6a3-202ENSMUST00000097653 Csmd3Q80T79 3707 aa5.35□□□□□ -1.55
Col6a3-202ENSMUST00000097653 Hspg2Q05793 3707 aaKnown RBP5.28□□□□□ -1.56
Col6a3-202ENSMUST00000097653 Gm9918Q8BUR5 174 aa5.24□□□□□ -1.57
Col6a3-202ENSMUST00000097653 2210017I01RikA0A0A6YVV1 95 aa5.24□□□□□ -1.57
Col6a3-202ENSMUST00000097653 Gm19668J3QMD1 248 aa5.12□□□□□ -1.59
Col6a3-202ENSMUST00000097653 Gm9736A0A1W2P7N1 277 aa5.09□□□□□ -1.59
Col6a3-202ENSMUST00000097653 Gm11939A2A592 99 aa5.01□□□□□ -1.61
Col6a3-202ENSMUST00000097653 Dnah7bL7N1Y0 4068 aa4.95□□□□□ -1.62
Col6a3-202ENSMUST00000097653 Dnah3Q8BW94 4083 aa4.93□□□□□ -1.62
Col6a3-202ENSMUST00000097653 Krtap13-1Q8K198 168 aa4.91□□□□□ -1.62
Col6a3-202ENSMUST00000097653 Krtap3-2Q9D638 99 aa4.89□□□□□ -1.63
Col6a3-202ENSMUST00000097653 Krtap3-3Q9D7P0 99 aa4.89□□□□□ -1.63
Col6a3-202ENSMUST00000097653 Krtap19-5O08632 62 aa4.86□□□□□ -1.63
Col6a3-202ENSMUST00000097653 Vps13bQ80TY5 3993 aa4.84□□□□□ -1.63
Col6a3-202ENSMUST00000097653 Krtap3-1A2A591 98 aa4.84□□□□□ -1.64
Col6a3-202ENSMUST00000097653 Gm10318A0A1W2P728 225 aa4.83□□□□□ -1.64
Col6a3-202ENSMUST00000097653 Kmt2aP55200 3966 aa4.79□□□□□ -1.64
Col6a3-202ENSMUST00000097653 Gm6358A0A087WPH4 74 aa4.77□□□□□ -1.65
Col6a3-202ENSMUST00000097653 Crct1Q6PAI5 102 aa4.77□□□□□ -1.65
Col6a3-202ENSMUST00000097653 PrkdcP97313 4128 aa4.77□□□□□ -1.65
Col6a3-202ENSMUST00000097653 Dnah6E9Q0B6 4144 aa4.67□□□□□ -1.66
Col6a3-202ENSMUST00000097653 TnxbO35452 4006 aa4.65□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Huwe1Q7TMY8 4377 aaKnown RBP4.64□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Sprr2kO70562 68 aa4.64□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Dnah7cA0A087WR13 4024 aa4.64□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Gm18596A0A1W2P860 280 aa4.63□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Krtap8-1O08633 61 aa4.58□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Dnah7aE9Q0T8 4024 aa4.58□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Krtap1-5A2A590 122 aa4.53□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Sprr2a3Q4KL71 83 aa4.53□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Sprr2a1Q9CQK8 83 aa4.53□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Krtap7-1Q9D3I6 87 aa4.53□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 152.9 ms