RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Vps13cQ8BX70 3748 aa9.37□□□□□ -0.91
Ret-202ENSMUST00000088790 Krtap14O08640 167 aa9.33□□□□□ -0.92
Ret-202ENSMUST00000088790 Gm3880A0A1B0GSB3 72 aa9.3□□□□□ -0.92
Ret-202ENSMUST00000088790 Gm9955Q8CEJ8 102 aa9.3□□□□□ -0.92
Ret-202ENSMUST00000088790 Krtap10-4Q08EG8 221 aa9.29□□□□□ -0.92
Ret-202ENSMUST00000088790 Gm2310J3QNJ2 377 aa9.29□□□□□ -0.92
Ret-202ENSMUST00000088790 Krtap15-1Q9QZU5 150 aa9.28□□□□□ -0.92
Ret-202ENSMUST00000088790 Zfhx3Q61329 3726 aa9.27□□□□□ -0.93
Ret-202ENSMUST00000088790 Gm3646F6S692 53 aa9.23□□□□□ -0.93
Ret-202ENSMUST00000088790 Tnp2P11378 117 aa9.2□□□□□ -0.94
Ret-202ENSMUST00000088790 OtogO55225 2910 aa9.18□□□□□ -0.94
Ret-202ENSMUST00000088790 SpenQ62504 3644 aaKnown RBP9.17□□□□□ -0.94
Ret-202ENSMUST00000088790 Tenm1Q9WTS4 2731 aa9.17□□□□□ -0.94
Ret-202ENSMUST00000088790 Gm5767A0A0J9YTU8 78 aa9.15□□□□□ -0.94
Ret-202ENSMUST00000088790 Csmd1Q923L3 3564 aa9.15□□□□□ -0.94
Ret-202ENSMUST00000088790 Smg1Q8BKX6 3658 aaKnown RBP9.14□□□□□ -0.95
Ret-202ENSMUST00000088790 4933415A04RikQ9D443 101 aa9.14□□□□□ -0.95
Ret-202ENSMUST00000088790 Krtap10-10A0A1W2P7T6 217 aa9.13□□□□□ -0.95
Ret-202ENSMUST00000088790 Zfhx4Q9JJN2 3550 aa9.11□□□□□ -0.95
Ret-202ENSMUST00000088790 CriptO70333 101 aa9.11□□□□□ -0.95
Ret-202ENSMUST00000088790 Spink7Q6IE32 76 aa9.06□□□□□ -0.96
Ret-202ENSMUST00000088790 Lama5Q61001 3718 aa9.05□□□□□ -0.96
Ret-202ENSMUST00000088790 Rps29P62274 56 aa8.99□□□□□ -0.97
Ret-202ENSMUST00000088790 1700042G07RikB1AUF7 90 aa8.94□□□□□ -0.98
Ret-202ENSMUST00000088790 Gm2696A0A1W2P709 240 aa8.94□□□□□ -0.98
Ret-202ENSMUST00000088790 Sec61bQ9CQS8 96 aaKnown RBP8.93□□□□□ -0.98
Ret-202ENSMUST00000088790 Rpl37Q9D823 97 aa8.93□□□□□ -0.98
Ret-202ENSMUST00000088790 Fam229aB2KGE5 128 aa8.92□□□□□ -0.98
Ret-202ENSMUST00000088790 Tenm2Q9WTS5 2764 aa8.86□□□□□ -0.99
Ret-202ENSMUST00000088790 Cox6b2Q80ZN9 88 aa8.85□□□□□ -0.99
Ret-202ENSMUST00000088790 Pla2g10Q9QXX3 151 aa8.83□□□□□ -1
Ret-202ENSMUST00000088790 BC029722A0A0N4SW31 51 aa8.82□□□□□ -1
Ret-202ENSMUST00000088790 D6Ertd527eA0A0N4SWI3 464 aa8.81□□□□□ -1
Ret-202ENSMUST00000088790 VwfQ8CIZ8 2813 aa8.8□□□□□ -1
Ret-202ENSMUST00000088790 Fbn1Q61554 2873 aaKnown RBP8.79□□□□□ -1
Ret-202ENSMUST00000088790 Romo1P60603 79 aa8.79□□□□□ -1
Ret-202ENSMUST00000088790 Gm884A2A9H6 3643 aa8.76□□□□□ -1.01
Ret-202ENSMUST00000088790 Gm10382Q3V0T5 144 aa8.72□□□□□ -1.01
Ret-202ENSMUST00000088790 Gm20538F6Z9R1 75 aa8.7□□□□□ -1.02
Ret-202ENSMUST00000088790 Camk2n1Q6QWF9 78 aa8.69□□□□□ -1.02
Ret-202ENSMUST00000088790 Muc4Q8JZM8 3443 aa8.68□□□□□ -1.02
Ret-202ENSMUST00000088790 Svep1A2AVA0 3567 aa8.67□□□□□ -1.02
Ret-202ENSMUST00000088790 Gm19426M0QWC7 77 aa8.66□□□□□ -1.02
Ret-202ENSMUST00000088790 Col7a1Q63870 2944 aa8.63□□□□□ -1.03
Ret-202ENSMUST00000088790 Gm5965D3Z724 196 aa8.58□□□□□ -1.04
Ret-202ENSMUST00000088790 Cmya5Q70KF4 3739 aa8.54□□□□□ -1.04
Ret-202ENSMUST00000088790 Megf8P60882 2789 aa8.46□□□□□ -1.06
Ret-202ENSMUST00000088790 A930033H14RikG5E8X6 103 aa8.42□□□□□ -1.06
Ret-202ENSMUST00000088790 Muc6Q80T03 2850 aa8.42□□□□□ -1.06
Ret-202ENSMUST00000088790 2310079G19RikQ9D6L6 185 aa8.39□□□□□ -1.07
Ret-202ENSMUST00000088790 Gm20537G3UYK7 97 aa8.31□□□□□ -1.08
Ret-202ENSMUST00000088790 2310057N15RikQ9D6T8 200 aa8.29□□□□□ -1.08
Ret-202ENSMUST00000088790 Ank2Q8C8R3 3898 aa8.27□□□□□ -1.09
Ret-202ENSMUST00000088790 Csmd2V9GX34 3611 aa8.27□□□□□ -1.09
Ret-202ENSMUST00000088790 Gm9918Q8BUR5 174 aa8.18□□□□□ -1.1
Ret-202ENSMUST00000088790 Gm17416Q30KP4 66 aa8.15□□□□□ -1.11
Ret-202ENSMUST00000088790 Gm9736A0A1W2P7N1 277 aa8.14□□□□□ -1.11
Ret-202ENSMUST00000088790 Gm21887J3QQ04 176 aa8.14□□□□□ -1.11
Ret-202ENSMUST00000088790 Gm11939A2A592 99 aa8.05□□□□□ -1.12
Ret-202ENSMUST00000088790 B930094E09RikQ8C4T2 136 aa8.03□□□□□ -1.12
Ret-202ENSMUST00000088790 2210017I01RikA0A0A6YVV1 95 aa7.99□□□□□ -1.13
Ret-202ENSMUST00000088790 CubnQ9JLB4 3623 aa7.99□□□□□ -1.13
Ret-202ENSMUST00000088790 LystP97412 3788 aa7.98□□□□□ -1.13
Ret-202ENSMUST00000088790 Ndufaf8A2AMZ4 74 aa7.97□□□□□ -1.13
Ret-202ENSMUST00000088790 Gm40193A0A1B0GT39 78 aa7.93□□□□□ -1.14
Ret-202ENSMUST00000088790 Krtap19-5O08632 62 aa7.89□□□□□ -1.15
Ret-202ENSMUST00000088790 Krtap3-2Q9D638 99 aa7.88□□□□□ -1.15
Ret-202ENSMUST00000088790 Krtap3-3Q9D7P0 99 aa7.88□□□□□ -1.15
Ret-202ENSMUST00000088790 Dnah14A0A140LIJ4 4489 aa7.86□□□□□ -1.15
Ret-202ENSMUST00000088790 Tnp1P10856 55 aa7.83□□□□□ -1.16
Ret-202ENSMUST00000088790 Gm17402F6Z0L5 76 aa7.72□□□□□ -1.17
Ret-202ENSMUST00000088790 Krtap13-1Q8K198 168 aa7.62□□□□□ -1.19
Ret-202ENSMUST00000088790 Dnah10D3YYQ8 4591 aa7.58□□□□□ -1.2
Ret-202ENSMUST00000088790 Huwe1Q7TMY8 4377 aaKnown RBP7.57□□□□□ -1.2
Ret-202ENSMUST00000088790 Gm9112A2AI92 75 aa7.56□□□□□ -1.2
Ret-202ENSMUST00000088790 Krtap3-1A2A591 98 aa7.56□□□□□ -1.2
Ret-202ENSMUST00000088790 Gm10318A0A1W2P728 225 aa7.55□□□□□ -1.2
Ret-202ENSMUST00000088790 Xirp2Q4U4S6 3784 aa7.54□□□□□ -1.2
Ret-202ENSMUST00000088790 Dnah5Q8VHE6 4621 aa7.52□□□□□ -1.21
Ret-202ENSMUST00000088790 BsnO88737 3942 aa7.49□□□□□ -1.21
Ret-202ENSMUST00000088790 Hspg2Q05793 3707 aaKnown RBP7.47□□□□□ -1.21
Ret-202ENSMUST00000088790 Crct1Q6PAI5 102 aa7.46□□□□□ -1.22
Ret-202ENSMUST00000088790 Csmd3Q80T79 3707 aa7.45□□□□□ -1.22
Ret-202ENSMUST00000088790 PlecQ9QXS1 4691 aaKnown RBP7.4□□□□□ -1.22
Ret-202ENSMUST00000088790 Stard9Q80TF6 4561 aa7.4□□□□□ -1.22
Ret-202ENSMUST00000088790 Dnah17Q69Z23 4481 aa7.38□□□□□ -1.23
Ret-202ENSMUST00000088790 Vps13dB1ART2 4390 aa7.38□□□□□ -1.23
Ret-202ENSMUST00000088790 Gm19668J3QMD1 248 aa7.35□□□□□ -1.23
Ret-202ENSMUST00000088790 Prm2P07978 107 aa7.31□□□□□ -1.24
Ret-202ENSMUST00000088790 Dnah11E9Q7N9 4488 aa7.19□□□□□ -1.26
Ret-202ENSMUST00000088790 Dnah7bL7N1Y0 4068 aa7.17□□□□□ -1.26
Ret-202ENSMUST00000088790 Dnah9B1AR51 4484 aa7.16□□□□□ -1.26
Ret-202ENSMUST00000088790 Ryr1E9PZQ0 5035 aa7.14□□□□□ -1.27
Ret-202ENSMUST00000088790 Krtap1-5A2A590 122 aa7.07□□□□□ -1.28
Ret-202ENSMUST00000088790 TnxbO35452 4006 aa7.05□□□□□ -1.28
Ret-202ENSMUST00000088790 Dync2h1Q45VK7 4306 aa7.03□□□□□ -1.28
Ret-202ENSMUST00000088790 Lrp1bQ9JI18 4599 aa7□□□□□ -1.29
Ret-202ENSMUST00000088790 ApobE9Q414 4505 aa6.98□□□□□ -1.29
Ret-202ENSMUST00000088790 Dync1h1Q9JHU4 4644 aaKnown RBP6.98□□□□□ -1.29
Ret-202ENSMUST00000088790 Sprr2a3Q4KL71 83 aa6.97□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms