RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Akap9Q70FJ1 3797 aa8.88□□□□□ -0.99
Usp38-201ENSMUST00000042724 Gm5767A0A0J9YTU8 78 aa8.86□□□□□ -0.99
Usp38-201ENSMUST00000042724 Gm2310J3QNJ2 377 aa8.84□□□□□ -0.99
Usp38-201ENSMUST00000042724 Gm9955Q8CEJ8 102 aa8.84□□□□□ -0.99
Usp38-201ENSMUST00000042724 Krtap10-10A0A1W2P7T6 217 aa8.83□□□□□ -1
Usp38-201ENSMUST00000042724 Zfhx3Q61329 3726 aa8.81□□□□□ -1
Usp38-201ENSMUST00000042724 Mp68P56379 58 aa8.78□□□□□ -1
Usp38-201ENSMUST00000042724 Rps29P62274 56 aa8.76□□□□□ -1.01
Usp38-201ENSMUST00000042724 Sec61bQ9CQS8 96 aaKnown RBP8.75□□□□□ -1.01
Usp38-201ENSMUST00000042724 Gm3880A0A1B0GSB3 72 aa8.72□□□□□ -1.01
Usp38-201ENSMUST00000042724 Helz2E9QAM5 2947 aaKnown RBP8.72□□□□□ -1.01
Usp38-201ENSMUST00000042724 Muc5acE9QAQ8 3455 aa8.71□□□□□ -1.01
Usp38-201ENSMUST00000042724 SmcpP15265 143 aa8.71□□□□□ -1.02
Usp38-201ENSMUST00000042724 Fam229aB2KGE5 128 aa8.69□□□□□ -1.02
Usp38-201ENSMUST00000042724 Gm2696A0A1W2P709 240 aa8.69□□□□□ -1.02
Usp38-201ENSMUST00000042724 Zfhx4Q9JJN2 3550 aa8.68□□□□□ -1.02
Usp38-201ENSMUST00000042724 Spink7Q6IE32 76 aa8.68□□□□□ -1.02
Usp38-201ENSMUST00000042724 OtogO55225 2910 aa8.62□□□□□ -1.03
Usp38-201ENSMUST00000042724 Gm3646F6S692 53 aa8.59□□□□□ -1.03
Usp38-201ENSMUST00000042724 Lama5Q61001 3718 aa8.56□□□□□ -1.04
Usp38-201ENSMUST00000042724 CriptO70333 101 aa8.55□□□□□ -1.04
Usp38-201ENSMUST00000042724 Smg1Q8BKX6 3658 aaKnown RBP8.52□□□□□ -1.05
Usp38-201ENSMUST00000042724 4933415A04RikQ9D443 101 aa8.51□□□□□ -1.05
Usp38-201ENSMUST00000042724 Csmd1Q923L3 3564 aa8.49□□□□□ -1.05
Usp38-201ENSMUST00000042724 Tenm1Q9WTS4 2731 aa8.47□□□□□ -1.05
Usp38-201ENSMUST00000042724 SpenQ62504 3644 aaKnown RBP8.46□□□□□ -1.05
Usp38-201ENSMUST00000042724 Pla2g10Q9QXX3 151 aa8.46□□□□□ -1.05
Usp38-201ENSMUST00000042724 BC029722A0A0N4SW31 51 aa8.45□□□□□ -1.06
Usp38-201ENSMUST00000042724 Rpl37Q9D823 97 aa8.42□□□□□ -1.06
Usp38-201ENSMUST00000042724 Tenm2Q9WTS5 2764 aa8.39□□□□□ -1.07
Usp38-201ENSMUST00000042724 Cox6b2Q80ZN9 88 aa8.39□□□□□ -1.07
Usp38-201ENSMUST00000042724 Fbn1Q61554 2873 aaKnown RBP8.39□□□□□ -1.07
Usp38-201ENSMUST00000042724 Gm884A2A9H6 3643 aa8.38□□□□□ -1.07
Usp38-201ENSMUST00000042724 Gm19426M0QWC7 77 aa8.37□□□□□ -1.07
Usp38-201ENSMUST00000042724 D6Ertd527eA0A0N4SWI3 464 aa8.35□□□□□ -1.07
Usp38-201ENSMUST00000042724 Gm20538F6Z9R1 75 aa8.32□□□□□ -1.08
Usp38-201ENSMUST00000042724 Camk2n1Q6QWF9 78 aa8.31□□□□□ -1.08
Usp38-201ENSMUST00000042724 Gm5965D3Z724 196 aa8.29□□□□□ -1.08
Usp38-201ENSMUST00000042724 Romo1P60603 79 aa8.27□□□□□ -1.09
Usp38-201ENSMUST00000042724 1700042G07RikB1AUF7 90 aa8.26□□□□□ -1.09
Usp38-201ENSMUST00000042724 Gm10382Q3V0T5 144 aa8.2□□□□□ -1.1
Usp38-201ENSMUST00000042724 VwfQ8CIZ8 2813 aa8.2□□□□□ -1.1
Usp38-201ENSMUST00000042724 Ank2Q8C8R3 3898 aa8.11□□□□□ -1.11
Usp38-201ENSMUST00000042724 Svep1A2AVA0 3567 aa8.1□□□□□ -1.11
Usp38-201ENSMUST00000042724 A930033H14RikG5E8X6 103 aa8.04□□□□□ -1.12
Usp38-201ENSMUST00000042724 2310057N15RikQ9D6T8 200 aa8.03□□□□□ -1.12
Usp38-201ENSMUST00000042724 Col7a1Q63870 2944 aa8.01□□□□□ -1.13
Usp38-201ENSMUST00000042724 Gm9918Q8BUR5 174 aa8□□□□□ -1.13
Usp38-201ENSMUST00000042724 Megf8P60882 2789 aa7.98□□□□□ -1.13
Usp38-201ENSMUST00000042724 Cmya5Q70KF4 3739 aa7.96□□□□□ -1.13
Usp38-201ENSMUST00000042724 2310079G19RikQ9D6L6 185 aa7.96□□□□□ -1.14
Usp38-201ENSMUST00000042724 Muc4Q8JZM8 3443 aa7.95□□□□□ -1.14
Usp38-201ENSMUST00000042724 Muc6Q80T03 2850 aa7.91□□□□□ -1.14
Usp38-201ENSMUST00000042724 Gm9736A0A1W2P7N1 277 aa7.88□□□□□ -1.15
Usp38-201ENSMUST00000042724 Gm17416Q30KP4 66 aa7.86□□□□□ -1.15
Usp38-201ENSMUST00000042724 Gm20537G3UYK7 97 aa7.81□□□□□ -1.16
Usp38-201ENSMUST00000042724 Gm21887J3QQ04 176 aa7.77□□□□□ -1.17
Usp38-201ENSMUST00000042724 Krtap19-5O08632 62 aa7.73□□□□□ -1.17
Usp38-201ENSMUST00000042724 Csmd2V9GX34 3611 aa7.73□□□□□ -1.17
Usp38-201ENSMUST00000042724 Gm11939A2A592 99 aa7.71□□□□□ -1.18
Usp38-201ENSMUST00000042724 2210017I01RikA0A0A6YVV1 95 aa7.68□□□□□ -1.18
Usp38-201ENSMUST00000042724 B930094E09RikQ8C4T2 136 aa7.61□□□□□ -1.19
Usp38-201ENSMUST00000042724 Dnah14A0A140LIJ4 4489 aa7.59□□□□□ -1.19
Usp38-201ENSMUST00000042724 LystP97412 3788 aa7.54□□□□□ -1.2
Usp38-201ENSMUST00000042724 Krtap3-2Q9D638 99 aa7.5□□□□□ -1.21
Usp38-201ENSMUST00000042724 Krtap3-3Q9D7P0 99 aa7.5□□□□□ -1.21
Usp38-201ENSMUST00000042724 Gm40193A0A1B0GT39 78 aa7.48□□□□□ -1.21
Usp38-201ENSMUST00000042724 Tnp1P10856 55 aa7.44□□□□□ -1.22
Usp38-201ENSMUST00000042724 Huwe1Q7TMY8 4377 aaKnown RBP7.41□□□□□ -1.22
Usp38-201ENSMUST00000042724 Gm17402F6Z0L5 76 aa7.41□□□□□ -1.22
Usp38-201ENSMUST00000042724 Ndufaf8A2AMZ4 74 aa7.34□□□□□ -1.23
Usp38-201ENSMUST00000042724 Krtap13-1Q8K198 168 aa7.33□□□□□ -1.24
Usp38-201ENSMUST00000042724 CubnQ9JLB4 3623 aa7.31□□□□□ -1.24
Usp38-201ENSMUST00000042724 BsnO88737 3942 aa7.26□□□□□ -1.25
Usp38-201ENSMUST00000042724 Gm10318A0A1W2P728 225 aa7.24□□□□□ -1.25
Usp38-201ENSMUST00000042724 Dnah10D3YYQ8 4591 aa7.24□□□□□ -1.25
Usp38-201ENSMUST00000042724 Dnah5Q8VHE6 4621 aa7.23□□□□□ -1.25
Usp38-201ENSMUST00000042724 Dnah17Q69Z23 4481 aa7.23□□□□□ -1.25
Usp38-201ENSMUST00000042724 Krtap3-1A2A591 98 aa7.22□□□□□ -1.25
Usp38-201ENSMUST00000042724 Crct1Q6PAI5 102 aa7.22□□□□□ -1.25
Usp38-201ENSMUST00000042724 Xirp2Q4U4S6 3784 aa7.21□□□□□ -1.25
Usp38-201ENSMUST00000042724 Vps13dB1ART2 4390 aa7.2□□□□□ -1.26
Usp38-201ENSMUST00000042724 Stard9Q80TF6 4561 aa7.18□□□□□ -1.26
Usp38-201ENSMUST00000042724 PlecQ9QXS1 4691 aaKnown RBP7.17□□□□□ -1.26
Usp38-201ENSMUST00000042724 Gm19668J3QMD1 248 aa7.03□□□□□ -1.28
Usp38-201ENSMUST00000042724 TnxbO35452 4006 aa7.03□□□□□ -1.28
Usp38-201ENSMUST00000042724 Hspg2Q05793 3707 aaKnown RBP7□□□□□ -1.29
Usp38-201ENSMUST00000042724 Prm2P07978 107 aa7□□□□□ -1.29
Usp38-201ENSMUST00000042724 Dync2h1Q45VK7 4306 aa6.95□□□□□ -1.3
Usp38-201ENSMUST00000042724 Dnah11E9Q7N9 4488 aa6.93□□□□□ -1.3
Usp38-201ENSMUST00000042724 Gm9112A2AI92 75 aa6.92□□□□□ -1.3
Usp38-201ENSMUST00000042724 Dnah9B1AR51 4484 aa6.91□□□□□ -1.3
Usp38-201ENSMUST00000042724 Csmd3Q80T79 3707 aa6.87□□□□□ -1.31
Usp38-201ENSMUST00000042724 Dync1h1Q9JHU4 4644 aaKnown RBP6.87□□□□□ -1.31
Usp38-201ENSMUST00000042724 Krtap1-5A2A590 122 aa6.86□□□□□ -1.31
Usp38-201ENSMUST00000042724 Dnah7bL7N1Y0 4068 aa6.85□□□□□ -1.31
Usp38-201ENSMUST00000042724 PrkdcP97313 4128 aa6.84□□□□□ -1.31
Usp38-201ENSMUST00000042724 Ryr1E9PZQ0 5035 aa6.82□□□□□ -1.32
Usp38-201ENSMUST00000042724 ApobE9Q414 4505 aa6.76□□□□□ -1.33
Usp38-201ENSMUST00000042724 Dnah2P0C6F1 4456 aa6.75□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms