RNA–Protein interactions for RNA: ENSMUST00000039782.13

Chd6-201, Transcript of Chromodomain-helicase-DNA-binding protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd6, Length 10,515 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6-201ENSMUST00000039782 Krtap15-1Q9QZU5 150 aa3.67□□□□□ -1.82
Chd6-201ENSMUST00000039782 Lrrc37aB1AWG4 3215 aa3.66□□□□□ -1.82
Chd6-201ENSMUST00000039782 Megf8P60882 2789 aa3.66□□□□□ -1.82
Chd6-201ENSMUST00000039782 VcanQ62059 3357 aa3.65□□□□□ -1.82
Chd6-201ENSMUST00000039782 Gm9112A2AI92 75 aa3.64□□□□□ -1.83
Chd6-201ENSMUST00000039782 Gm19426M0QWC7 77 aa3.63□□□□□ -1.83
Chd6-201ENSMUST00000039782 Cox6b2Q80ZN9 88 aa3.63□□□□□ -1.83
Chd6-201ENSMUST00000039782 Krtap29-1A2A5X4 342 aa3.63□□□□□ -1.83
Chd6-201ENSMUST00000039782 2310050C09RikG5E8Z3 280 aa3.62□□□□□ -1.83
Chd6-201ENSMUST00000039782 Col6a3E9PWQ3 3284 aa3.61□□□□□ -1.83
Chd6-201ENSMUST00000039782 Gm11565A2A4M7 156 aa3.6□□□□□ -1.83
Chd6-201ENSMUST00000039782 Szt2A2A9C3 3431 aa3.59□□□□□ -1.83
Chd6-201ENSMUST00000039782 Krtap13O88375 197 aa3.59□□□□□ -1.83
Chd6-201ENSMUST00000039782 Prm2P07978 107 aa3.59□□□□□ -1.84
Chd6-201ENSMUST00000039782 Fbn1Q61554 2873 aaKnown RBP3.58□□□□□ -1.84
Chd6-201ENSMUST00000039782 DmdP11531 3678 aa3.58□□□□□ -1.84
Chd6-201ENSMUST00000039782 SpegQ62407 3262 aa3.57□□□□□ -1.84
Chd6-201ENSMUST00000039782 Gm5767A0A0J9YTU8 78 aa3.57□□□□□ -1.84
Chd6-201ENSMUST00000039782 VwfQ8CIZ8 2813 aa3.56□□□□□ -1.84
Chd6-201ENSMUST00000039782 D6Ertd527eA0A0N4SWI3 464 aa3.56□□□□□ -1.84
Chd6-201ENSMUST00000039782 Sec61bQ9CQS8 96 aaKnown RBP3.56□□□□□ -1.84
Chd6-201ENSMUST00000039782 BC029722A0A0N4SW31 51 aa3.56□□□□□ -1.84
Chd6-201ENSMUST00000039782 Gm36176A0A1W2P8D5 158 aa3.56□□□□□ -1.84
Chd6-201ENSMUST00000039782 Myo15aQ9QZZ4 3511 aa3.54□□□□□ -1.84
Chd6-201ENSMUST00000039782 OtogO55225 2910 aa3.53□□□□□ -1.85
Chd6-201ENSMUST00000039782 Gm20537G3UYK7 97 aa3.53□□□□□ -1.85
Chd6-201ENSMUST00000039782 Csmd1Q923L3 3564 aa3.52□□□□□ -1.85
Chd6-201ENSMUST00000039782 Gm17349F7BGH6 99 aa3.51□□□□□ -1.85
Chd6-201ENSMUST00000039782 Smg1Q8BKX6 3658 aaKnown RBP3.5□□□□□ -1.85
Chd6-201ENSMUST00000039782 Cmya5Q70KF4 3739 aa3.49□□□□□ -1.85
Chd6-201ENSMUST00000039782 Wdfy3Q6VNB8 3508 aa3.48□□□□□ -1.85
Chd6-201ENSMUST00000039782 Tenm2Q9WTS5 2764 aa3.48□□□□□ -1.85
Chd6-201ENSMUST00000039782 Gm21887J3QQ04 176 aa3.47□□□□□ -1.85
Chd6-201ENSMUST00000039782 Tenm4Q3UHK6 2771 aa3.45□□□□□ -1.86
Chd6-201ENSMUST00000039782 Gm40193A0A1B0GT39 78 aa3.45□□□□□ -1.86
Chd6-201ENSMUST00000039782 Dchs1E9PVD3 3291 aa3.44□□□□□ -1.86
Chd6-201ENSMUST00000039782 Gm9507D3Z5T3 223 aa3.44□□□□□ -1.86
Chd6-201ENSMUST00000039782 Tnp2P11378 117 aa3.43□□□□□ -1.86
Chd6-201ENSMUST00000039782 2310061N02RikQ9D6S9 174 aa3.43□□□□□ -1.86
Chd6-201ENSMUST00000039782 SpenQ62504 3644 aaKnown RBP3.42□□□□□ -1.86
Chd6-201ENSMUST00000039782 Ank2Q8C8R3 3898 aa3.42□□□□□ -1.86
Chd6-201ENSMUST00000039782 Zfhx4Q9JJN2 3550 aa3.41□□□□□ -1.86
Chd6-201ENSMUST00000039782 Rps29P62274 56 aa3.41□□□□□ -1.86
Chd6-201ENSMUST00000039782 RelnQ60841 3461 aa3.4□□□□□ -1.86
Chd6-201ENSMUST00000039782 Gm5965D3Z724 196 aa3.4□□□□□ -1.86
Chd6-201ENSMUST00000039782 Krtap10-4Q08EG8 221 aa3.4□□□□□ -1.87
Chd6-201ENSMUST00000039782 Col7a1Q63870 2944 aa3.37□□□□□ -1.87
Chd6-201ENSMUST00000039782 Lama5Q61001 3718 aa3.37□□□□□ -1.87
Chd6-201ENSMUST00000039782 Tnp1P10856 55 aa3.36□□□□□ -1.87
Chd6-201ENSMUST00000039782 2310057N15RikQ9D6T8 200 aa3.35□□□□□ -1.87
Chd6-201ENSMUST00000039782 Krtap10-10A0A1W2P7T6 217 aa3.35□□□□□ -1.87
Chd6-201ENSMUST00000039782 2310079G19RikQ9D6L6 185 aa3.34□□□□□ -1.87
Chd6-201ENSMUST00000039782 Gm884A2A9H6 3643 aa3.33□□□□□ -1.88
Chd6-201ENSMUST00000039782 B930094E09RikQ8C4T2 136 aa3.33□□□□□ -1.88
Chd6-201ENSMUST00000039782 A930033H14RikG5E8X6 103 aa3.28□□□□□ -1.88
Chd6-201ENSMUST00000039782 Muc5acE9QAQ8 3455 aa3.27□□□□□ -1.89
Chd6-201ENSMUST00000039782 Gm2696A0A1W2P709 240 aa3.25□□□□□ -1.89
Chd6-201ENSMUST00000039782 Csmd2V9GX34 3611 aa3.2□□□□□ -1.9
Chd6-201ENSMUST00000039782 BsnO88737 3942 aa3.19□□□□□ -1.9
Chd6-201ENSMUST00000039782 LystP97412 3788 aa3.18□□□□□ -1.9
Chd6-201ENSMUST00000039782 Muc6Q80T03 2850 aa3.17□□□□□ -1.9
Chd6-201ENSMUST00000039782 Xirp2Q4U4S6 3784 aa3.12□□□□□ -1.91
Chd6-201ENSMUST00000039782 Csmd3Q80T79 3707 aa3.08□□□□□ -1.92
Chd6-201ENSMUST00000039782 Muc4Q8JZM8 3443 aa3.08□□□□□ -1.92
Chd6-201ENSMUST00000039782 Svep1A2AVA0 3567 aa3.08□□□□□ -1.92
Chd6-201ENSMUST00000039782 Gm17402F6Z0L5 76 aa3.07□□□□□ -1.92
Chd6-201ENSMUST00000039782 Gm17416Q30KP4 66 aa3.07□□□□□ -1.92
Chd6-201ENSMUST00000039782 Hspg2Q05793 3707 aaKnown RBP3.04□□□□□ -1.92
Chd6-201ENSMUST00000039782 2210017I01RikA0A0A6YVV1 95 aa3.03□□□□□ -1.92
Chd6-201ENSMUST00000039782 Gm9736A0A1W2P7N1 277 aa3.03□□□□□ -1.92
Chd6-201ENSMUST00000039782 Gm19668J3QMD1 248 aa2.95□□□□□ -1.94
Chd6-201ENSMUST00000039782 Gm11939A2A592 99 aa2.95□□□□□ -1.94
Chd6-201ENSMUST00000039782 Gm9918Q8BUR5 174 aa2.95□□□□□ -1.94
Chd6-201ENSMUST00000039782 CubnQ9JLB4 3623 aa2.95□□□□□ -1.94
Chd6-201ENSMUST00000039782 Krtap3-2Q9D638 99 aa2.94□□□□□ -1.94
Chd6-201ENSMUST00000039782 Krtap3-3Q9D7P0 99 aa2.94□□□□□ -1.94
Chd6-201ENSMUST00000039782 4933428G20RikQ9D3X4 101 aa2.93□□□□□ -1.94
Chd6-201ENSMUST00000039782 Krtap13-1Q8K198 168 aa2.93□□□□□ -1.94
Chd6-201ENSMUST00000039782 Krtap3-1A2A591 98 aa2.9□□□□□ -1.95
Chd6-201ENSMUST00000039782 Gm10318A0A1W2P728 225 aa2.9□□□□□ -1.95
Chd6-201ENSMUST00000039782 Krtap7-1Q9D3I6 87 aa2.88□□□□□ -1.95
Chd6-201ENSMUST00000039782 Dnah3Q8BW94 4083 aa2.88□□□□□ -1.95
Chd6-201ENSMUST00000039782 Vps13bQ80TY5 3993 aa2.87□□□□□ -1.95
Chd6-201ENSMUST00000039782 Dnah7bL7N1Y0 4068 aa2.82□□□□□ -1.96
Chd6-201ENSMUST00000039782 Crct1Q6PAI5 102 aa2.8□□□□□ -1.96
Chd6-201ENSMUST00000039782 Krtap19-5O08632 62 aa2.75□□□□□ -1.97
Chd6-201ENSMUST00000039782 Kmt2aP55200 3966 aa2.72□□□□□ -1.97
Chd6-201ENSMUST00000039782 Dnah7cA0A087WR13 4024 aa2.69□□□□□ -1.98
Chd6-201ENSMUST00000039782 Sprr2a3Q4KL71 83 aa2.69□□□□□ -1.98
Chd6-201ENSMUST00000039782 Sprr2a1Q9CQK8 83 aa2.69□□□□□ -1.98
Chd6-201ENSMUST00000039782 Dnah7aE9Q0T8 4024 aa2.69□□□□□ -1.98
Chd6-201ENSMUST00000039782 Gm19402J3QJV4 266 aa2.65□□□□□ -1.98
Chd6-201ENSMUST00000039782 Krtap1-5A2A590 122 aa2.65□□□□□ -1.99
Chd6-201ENSMUST00000039782 Gm6358A0A087WPH4 74 aa2.63□□□□□ -1.99
Chd6-201ENSMUST00000039782 Dnah6E9Q0B6 4144 aa2.63□□□□□ -1.99
Chd6-201ENSMUST00000039782 Sprr2kO70562 68 aa2.61□□□□□ -1.99
Chd6-201ENSMUST00000039782 PrkdcP97313 4128 aa2.59□□□□□ -1.99
Chd6-201ENSMUST00000039782 Krtap19-9aF8WH65 55 aa2.58□□□□□ -2
Chd6-201ENSMUST00000039782 Krtap19-9bQ99NG9 58 aa2.56□□□□□ -2
Chd6-201ENSMUST00000039782 Krtap1-4Q3V2D6 188 aa2.53□□□□□ -2
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms