RNA–Protein interactions for RNA: ENSMUST00000037117.5

Gtf3c4-201, Transcript of General transcription factor 3C polypeptide 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gtf3c4, Length 6,941 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-201ENSMUST00000037117 Sprr1aQ62266 144 aa6.72□□□□□ -1.33
Gtf3c4-201ENSMUST00000037117 DspE9Q557 2883 aaKnown RBP6.71□□□□□ -1.34
Gtf3c4-201ENSMUST00000037117 Krtap14O08640 167 aa6.7□□□□□ -1.34
Gtf3c4-201ENSMUST00000037117 Itpr2Q9Z329 2701 aa6.68□□□□□ -1.34
Gtf3c4-201ENSMUST00000037117 Igfn1Q3KNY0 2849 aa6.67□□□□□ -1.34
Gtf3c4-201ENSMUST00000037117 A730071L15RikQ8C4X0 137 aa6.67□□□□□ -1.34
Gtf3c4-201ENSMUST00000037117 Gm10318A0A1W2P728 225 aa6.65□□□□□ -1.34
Gtf3c4-201ENSMUST00000037117 Gm2310J3QNJ2 377 aa6.65□□□□□ -1.35
Gtf3c4-201ENSMUST00000037117 Tnp1P10856 55 aa6.64□□□□□ -1.35
Gtf3c4-201ENSMUST00000037117 FlncQ8VHX6 2726 aaKnown RBP6.63□□□□□ -1.35
Gtf3c4-201ENSMUST00000037117 Dchs1E9PVD3 3291 aa6.62□□□□□ -1.35
Gtf3c4-201ENSMUST00000037117 Tex15F8VPN2 2785 aa6.62□□□□□ -1.35
Gtf3c4-201ENSMUST00000037117 Wdfy3Q6VNB8 3508 aa6.6□□□□□ -1.35
Gtf3c4-201ENSMUST00000037117 Zzef1Q5SSH7 2924 aa6.6□□□□□ -1.35
Gtf3c4-201ENSMUST00000037117 Tenm4Q3UHK6 2771 aa6.58□□□□□ -1.36
Gtf3c4-201ENSMUST00000037117 SpegQ62407 3262 aa6.55□□□□□ -1.36
Gtf3c4-201ENSMUST00000037117 RelnQ60841 3461 aa6.52□□□□□ -1.37
Gtf3c4-201ENSMUST00000037117 Trank1Q8BV79 2999 aa6.51□□□□□ -1.37
Gtf3c4-201ENSMUST00000037117 Celsr2Q9R0M0 2920 aa6.51□□□□□ -1.37
Gtf3c4-201ENSMUST00000037117 Cox6b2Q80ZN9 88 aa6.5□□□□□ -1.37
Gtf3c4-201ENSMUST00000037117 Chd9Q8BYH8 2885 aa6.49□□□□□ -1.37
Gtf3c4-201ENSMUST00000037117 Prm2P07978 107 aa6.48□□□□□ -1.37
Gtf3c4-201ENSMUST00000037117 A930033H14RikG5E8X6 103 aa6.48□□□□□ -1.37
Gtf3c4-201ENSMUST00000037117 2310061N02RikQ9D6S9 174 aa6.45□□□□□ -1.38
Gtf3c4-201ENSMUST00000037117 FcgbpE9Q0B5 2583 aa6.44□□□□□ -1.38
Gtf3c4-201ENSMUST00000037117 4933428G20RikQ9D3X4 101 aa6.44□□□□□ -1.38
Gtf3c4-201ENSMUST00000037117 Tenm3Q9WTS6 2715 aa6.41□□□□□ -1.38
Gtf3c4-201ENSMUST00000037117 DmdP11531 3678 aa6.41□□□□□ -1.38
Gtf3c4-201ENSMUST00000037117 Gm9736A0A1W2P7N1 277 aa6.4□□□□□ -1.38
Gtf3c4-201ENSMUST00000037117 Nf1Q04690 2841 aa6.38□□□□□ -1.39
Gtf3c4-201ENSMUST00000037117 LrbaQ9ESE1 2856 aa6.36□□□□□ -1.39
Gtf3c4-201ENSMUST00000037117 ApcQ61315 2845 aa6.34□□□□□ -1.39
Gtf3c4-201ENSMUST00000037117 Vps13cQ8BX70 3748 aa6.34□□□□□ -1.39
Gtf3c4-201ENSMUST00000037117 Akap9Q70FJ1 3797 aa6.33□□□□□ -1.4
Gtf3c4-201ENSMUST00000037117 Pdzd2E9Q1M1 2796 aa6.33□□□□□ -1.4
Gtf3c4-201ENSMUST00000037117 D6Ertd527eA0A0N4SWI3 464 aa6.33□□□□□ -1.4
Gtf3c4-201ENSMUST00000037117 Srrm2Q8BTI8 2703 aaKnown RBP6.32□□□□□ -1.4
Gtf3c4-201ENSMUST00000037117 Crct1Q6PAI5 102 aa6.32□□□□□ -1.4
Gtf3c4-201ENSMUST00000037117 SmcpP15265 143 aa6.28□□□□□ -1.4
Gtf3c4-201ENSMUST00000037117 Muc5acE9QAQ8 3455 aa6.27□□□□□ -1.41
Gtf3c4-201ENSMUST00000037117 TgO08710 2766 aa6.26□□□□□ -1.41
Gtf3c4-201ENSMUST00000037117 Rps29P62274 56 aa6.17□□□□□ -1.42
Gtf3c4-201ENSMUST00000037117 Gm6358A0A087WPH4 74 aa6.15□□□□□ -1.42
Gtf3c4-201ENSMUST00000037117 Helz2E9QAM5 2947 aaKnown RBP6.13□□□□□ -1.43
Gtf3c4-201ENSMUST00000037117 Gm20537G3UYK7 97 aa6.12□□□□□ -1.43
Gtf3c4-201ENSMUST00000037117 Zfhx4Q9JJN2 3550 aa6.11□□□□□ -1.43
Gtf3c4-201ENSMUST00000037117 Lama5Q61001 3718 aa6.1□□□□□ -1.43
Gtf3c4-201ENSMUST00000037117 OtogO55225 2910 aa6.08□□□□□ -1.44
Gtf3c4-201ENSMUST00000037117 Smg1Q8BKX6 3658 aaKnown RBP6.07□□□□□ -1.44
Gtf3c4-201ENSMUST00000037117 Tenm1Q9WTS4 2731 aa6.06□□□□□ -1.44
Gtf3c4-201ENSMUST00000037117 B930094E09RikQ8C4T2 136 aa6.05□□□□□ -1.44
Gtf3c4-201ENSMUST00000037117 Gm40193A0A1B0GT39 78 aa6.02□□□□□ -1.45
Gtf3c4-201ENSMUST00000037117 Csmd1Q923L3 3564 aa6.02□□□□□ -1.45
Gtf3c4-201ENSMUST00000037117 Sprr2kO70562 68 aa6.02□□□□□ -1.45
Gtf3c4-201ENSMUST00000037117 Tenm2Q9WTS5 2764 aa6□□□□□ -1.45
Gtf3c4-201ENSMUST00000037117 SpenQ62504 3644 aaKnown RBP5.98□□□□□ -1.45
Gtf3c4-201ENSMUST00000037117 Fbn1Q61554 2873 aaKnown RBP5.92□□□□□ -1.46
Gtf3c4-201ENSMUST00000037117 Gm884A2A9H6 3643 aa5.88□□□□□ -1.47
Gtf3c4-201ENSMUST00000037117 VwfQ8CIZ8 2813 aa5.86□□□□□ -1.47
Gtf3c4-201ENSMUST00000037117 Svep1A2AVA0 3567 aa5.8□□□□□ -1.48
Gtf3c4-201ENSMUST00000037117 Col7a1Q63870 2944 aa5.78□□□□□ -1.48
Gtf3c4-201ENSMUST00000037117 Megf8P60882 2789 aa5.77□□□□□ -1.49
Gtf3c4-201ENSMUST00000037117 Gm19668J3QMD1 248 aa5.75□□□□□ -1.49
Gtf3c4-201ENSMUST00000037117 2210017I01RikA0A0A6YVV1 95 aa5.74□□□□□ -1.49
Gtf3c4-201ENSMUST00000037117 2310079G19RikQ9D6L6 185 aa5.69□□□□□ -1.5
Gtf3c4-201ENSMUST00000037117 Muc4Q8JZM8 3443 aa5.66□□□□□ -1.5
Gtf3c4-201ENSMUST00000037117 Cmya5Q70KF4 3739 aa5.66□□□□□ -1.5
Gtf3c4-201ENSMUST00000037117 Csmd2V9GX34 3611 aa5.65□□□□□ -1.51
Gtf3c4-201ENSMUST00000037117 Ank2Q8C8R3 3898 aa5.64□□□□□ -1.51
Gtf3c4-201ENSMUST00000037117 Sprr2gO70558 76 aa5.6□□□□□ -1.51
Gtf3c4-201ENSMUST00000037117 Muc6Q80T03 2850 aa5.59□□□□□ -1.51
Gtf3c4-201ENSMUST00000037117 Gm18596A0A1W2P860 280 aa5.59□□□□□ -1.52
Gtf3c4-201ENSMUST00000037117 Gm19402J3QJV4 266 aa5.5□□□□□ -1.53
Gtf3c4-201ENSMUST00000037117 Krtap8-1O08633 61 aa5.5□□□□□ -1.53
Gtf3c4-201ENSMUST00000037117 Krtap13-1Q8K198 168 aa5.48□□□□□ -1.53
Gtf3c4-201ENSMUST00000037117 Krtap19-5O08632 62 aa5.46□□□□□ -1.54
Gtf3c4-201ENSMUST00000037117 Gm17416Q30KP4 66 aa5.4□□□□□ -1.54
Gtf3c4-201ENSMUST00000037117 Dnah14A0A140LIJ4 4489 aa5.37□□□□□ -1.55
Gtf3c4-201ENSMUST00000037117 Krtap7-1Q9D3I6 87 aa5.34□□□□□ -1.55
Gtf3c4-201ENSMUST00000037117 LorP18165 486 aa5.34□□□□□ -1.55
Gtf3c4-201ENSMUST00000037117 Gm11939A2A592 99 aa5.34□□□□□ -1.56
Gtf3c4-201ENSMUST00000037117 LystP97412 3788 aa5.31□□□□□ -1.56
Gtf3c4-201ENSMUST00000037117 CubnQ9JLB4 3623 aa5.31□□□□□ -1.56
Gtf3c4-201ENSMUST00000037117 Huwe1Q7TMY8 4377 aaKnown RBP5.25□□□□□ -1.57
Gtf3c4-201ENSMUST00000037117 Csmd3Q80T79 3707 aa5.25□□□□□ -1.57
Gtf3c4-201ENSMUST00000037117 2310046K23RikA0A0A6YVW6 87 aa5.25□□□□□ -1.57
Gtf3c4-201ENSMUST00000037117 Gm17402F6Z0L5 76 aa5.23□□□□□ -1.57
Gtf3c4-201ENSMUST00000037117 Dnah10D3YYQ8 4591 aa5.14□□□□□ -1.59
Gtf3c4-201ENSMUST00000037117 BsnO88737 3942 aa5.1□□□□□ -1.59
Gtf3c4-201ENSMUST00000037117 Krtap3-2Q9D638 99 aa5.1□□□□□ -1.59
Gtf3c4-201ENSMUST00000037117 Krtap3-3Q9D7P0 99 aa5.1□□□□□ -1.59
Gtf3c4-201ENSMUST00000037117 Dnah5Q8VHE6 4621 aa5.1□□□□□ -1.59
Gtf3c4-201ENSMUST00000037117 Xirp2Q4U4S6 3784 aa5.06□□□□□ -1.6
Gtf3c4-201ENSMUST00000037117 PlecQ9QXS1 4691 aaKnown RBP5.04□□□□□ -1.6
Gtf3c4-201ENSMUST00000037117 Gm38119A0A0A6YX29 146 aa5.03□□□□□ -1.6
Gtf3c4-201ENSMUST00000037117 Hspg2Q05793 3707 aaKnown RBP5.02□□□□□ -1.61
Gtf3c4-201ENSMUST00000037117 Stard9Q80TF6 4561 aa5□□□□□ -1.61
Gtf3c4-201ENSMUST00000037117 Krtap19-9aF8WH65 55 aa5□□□□□ -1.61
Gtf3c4-201ENSMUST00000037117 Vps13dB1ART2 4390 aa4.99□□□□□ -1.61
Gtf3c4-201ENSMUST00000037117 Krtap3-1A2A591 98 aa4.99□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms