RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Cypt15B1AXS0 87 aa6.59□□□□□ -1.35
Rnf40-201ENSMUST00000033088 RetnlbQ99P86 105 aa6.59□□□□□ -1.35
Rnf40-201ENSMUST00000033088 2310034C09RikQ9D746 214 aa6.58□□□□□ -1.36
Rnf40-201ENSMUST00000033088 Gm37013Q8K491 104 aa6.57□□□□□ -1.36
Rnf40-201ENSMUST00000033088 Odf3bQ5M8M2 238 aa6.56□□□□□ -1.36
Rnf40-201ENSMUST00000033088 Uqcr11Q9CPX8 56 aa6.55□□□□□ -1.36
Rnf40-201ENSMUST00000033088 Gm10643Q3URG9 111 aa6.55□□□□□ -1.36
Rnf40-201ENSMUST00000033088 Gm12216A0A1W2P827 62 aa6.53□□□□□ -1.36
Rnf40-201ENSMUST00000033088 OxtP35454 125 aa6.53□□□□□ -1.36
Rnf40-201ENSMUST00000033088 Krtap13O88375 197 aa6.53□□□□□ -1.36
Rnf40-201ENSMUST00000033088 Megf8P60882 2789 aa6.49□□□□□ -1.37
Rnf40-201ENSMUST00000033088 Krtap10-4Q08EG8 221 aa6.47□□□□□ -1.37
Rnf40-201ENSMUST00000033088 4930507D05RikQ8C9C9 103 aa6.47□□□□□ -1.37
Rnf40-201ENSMUST00000033088 Sprr1aQ62266 144 aa6.46□□□□□ -1.37
Rnf40-201ENSMUST00000033088 Gm10139O88245 57 aa6.44□□□□□ -1.38
Rnf40-201ENSMUST00000033088 Gm9507D3Z5T3 223 aa6.44□□□□□ -1.38
Rnf40-201ENSMUST00000033088 Gm17606F6ZL36 78 aa6.43□□□□□ -1.38
Rnf40-201ENSMUST00000033088 Tenm2Q9WTS5 2764 aa6.4□□□□□ -1.38
Rnf40-201ENSMUST00000033088 Mp68P56379 58 aa6.4□□□□□ -1.39
Rnf40-201ENSMUST00000033088 Rnase13Q5GAM7 153 aa6.4□□□□□ -1.39
Rnf40-201ENSMUST00000033088 Muc6Q80T03 2850 aa6.36□□□□□ -1.39
Rnf40-201ENSMUST00000033088 AW011738F6S7Q2 159 aa6.36□□□□□ -1.39
Rnf40-201ENSMUST00000033088 Kmt2aP55200 3966 aa6.35□□□□□ -1.39
Rnf40-201ENSMUST00000033088 Krtap10-10A0A1W2P7T6 217 aa6.32□□□□□ -1.4
Rnf40-201ENSMUST00000033088 Gm17349F7BGH6 99 aa6.31□□□□□ -1.4
Rnf40-201ENSMUST00000033088 Cypt14J3QPF7 87 aa6.31□□□□□ -1.4
Rnf40-201ENSMUST00000033088 Dnah10D3YYQ8 4591 aa6.31□□□□□ -1.4
Rnf40-201ENSMUST00000033088 Dnah6E9Q0B6 4144 aa6.31□□□□□ -1.4
Rnf40-201ENSMUST00000033088 Gm2310J3QNJ2 377 aa6.3□□□□□ -1.4
Rnf40-201ENSMUST00000033088 TnxbO35452 4006 aa6.29□□□□□ -1.4
Rnf40-201ENSMUST00000033088 Csmd3Q80T79 3707 aa6.28□□□□□ -1.4
Rnf40-201ENSMUST00000033088 Dnah14A0A140LIJ4 4489 aa6.28□□□□□ -1.4
Rnf40-201ENSMUST00000033088 Dnah3Q8BW94 4083 aa6.27□□□□□ -1.41
Rnf40-201ENSMUST00000033088 Gm4491E0CX42 125 aa6.26□□□□□ -1.41
Rnf40-201ENSMUST00000033088 NbdyA0A0N4SUI7 68 aa6.26□□□□□ -1.41
Rnf40-201ENSMUST00000033088 Gm16253D3Z167 63 aa6.24□□□□□ -1.41
Rnf40-201ENSMUST00000033088 Defb11Q8R2I7 77 aa6.24□□□□□ -1.41
Rnf40-201ENSMUST00000033088 2310050C09RikG5E8Z3 280 aa6.23□□□□□ -1.41
Rnf40-201ENSMUST00000033088 Gm10065F6TJM2 114 aa6.21□□□□□ -1.42
Rnf40-201ENSMUST00000033088 Pla2g10Q9QXX3 151 aa6.17□□□□□ -1.42
Rnf40-201ENSMUST00000033088 2310061N02RikQ9D6S9 174 aa6.17□□□□□ -1.42
Rnf40-201ENSMUST00000033088 Dnah17Q69Z23 4481 aa6.16□□□□□ -1.42
Rnf40-201ENSMUST00000033088 Krtap14O08640 167 aa6.15□□□□□ -1.43
Rnf40-201ENSMUST00000033088 Dnah7bL7N1Y0 4068 aa6.13□□□□□ -1.43
Rnf40-201ENSMUST00000033088 Gm2696A0A1W2P709 240 aa6.1□□□□□ -1.43
Rnf40-201ENSMUST00000033088 Huwe1Q7TMY8 4377 aaKnown RBP6.09□□□□□ -1.43
Rnf40-201ENSMUST00000033088 Dnah1E9Q8T7 4250 aa6.09□□□□□ -1.43
Rnf40-201ENSMUST00000033088 Krtap29-1A2A5X4 342 aa6.08□□□□□ -1.44
Rnf40-201ENSMUST00000033088 Gm20538F6Z9R1 75 aa6.07□□□□□ -1.44
Rnf40-201ENSMUST00000033088 Krtap15-1Q9QZU5 150 aa6.07□□□□□ -1.44
Rnf40-201ENSMUST00000033088 Dync2h1Q45VK7 4306 aa6.03□□□□□ -1.44
Rnf40-201ENSMUST00000033088 Gm10382Q3V0T5 144 aa6.02□□□□□ -1.45
Rnf40-201ENSMUST00000033088 Gm9955Q8CEJ8 102 aa6.02□□□□□ -1.45
Rnf40-201ENSMUST00000033088 PrkdcP97313 4128 aa6□□□□□ -1.45
Rnf40-201ENSMUST00000033088 Romo1P60603 79 aa5.99□□□□□ -1.45
Rnf40-201ENSMUST00000033088 Gm9918Q8BUR5 174 aa5.97□□□□□ -1.45
Rnf40-201ENSMUST00000033088 D6Ertd527eA0A0N4SWI3 464 aa5.96□□□□□ -1.46
Rnf40-201ENSMUST00000033088 Rpl37Q9D823 97 aa5.96□□□□□ -1.46
Rnf40-201ENSMUST00000033088 Ndufaf8A2AMZ4 74 aa5.95□□□□□ -1.46
Rnf40-201ENSMUST00000033088 Fras1Q80T14 4010 aa5.94□□□□□ -1.46
Rnf40-201ENSMUST00000033088 PlecQ9QXS1 4691 aaKnown RBP5.93□□□□□ -1.46
Rnf40-201ENSMUST00000033088 Gm20537G3UYK7 97 aa5.91□□□□□ -1.46
Rnf40-201ENSMUST00000033088 Dnah11E9Q7N9 4488 aa5.89□□□□□ -1.47
Rnf40-201ENSMUST00000033088 Spink7Q6IE32 76 aa5.88□□□□□ -1.47
Rnf40-201ENSMUST00000033088 Cox6b2Q80ZN9 88 aa5.86□□□□□ -1.47
Rnf40-201ENSMUST00000033088 Dnah9B1AR51 4484 aa5.86□□□□□ -1.47
Rnf40-201ENSMUST00000033088 Tnp2P11378 117 aa5.83□□□□□ -1.48
Rnf40-201ENSMUST00000033088 Prm2P07978 107 aa5.8□□□□□ -1.48
Rnf40-201ENSMUST00000033088 Dnah7aE9Q0T8 4024 aa5.79□□□□□ -1.48
Rnf40-201ENSMUST00000033088 Dnah7cA0A087WR13 4024 aa5.77□□□□□ -1.49
Rnf40-201ENSMUST00000033088 2310079G19RikQ9D6L6 185 aa5.76□□□□□ -1.49
Rnf40-201ENSMUST00000033088 Gm5767A0A0J9YTU8 78 aa5.73□□□□□ -1.49
Rnf40-201ENSMUST00000033088 Gm19426M0QWC7 77 aa5.73□□□□□ -1.49
Rnf40-201ENSMUST00000033088 Gm5965D3Z724 196 aa5.7□□□□□ -1.5
Rnf40-201ENSMUST00000033088 Gm21887J3QQ04 176 aa5.7□□□□□ -1.5
Rnf40-201ENSMUST00000033088 Dnah5Q8VHE6 4621 aa5.69□□□□□ -1.5
Rnf40-201ENSMUST00000033088 Vps13dB1ART2 4390 aa5.69□□□□□ -1.5
Rnf40-201ENSMUST00000033088 Dnah2P0C6F1 4456 aa5.64□□□□□ -1.51
Rnf40-201ENSMUST00000033088 Gm9736A0A1W2P7N1 277 aa5.63□□□□□ -1.51
Rnf40-201ENSMUST00000033088 Gm9112A2AI92 75 aa5.61□□□□□ -1.51
Rnf40-201ENSMUST00000033088 Pkd1O08852 4293 aa5.59□□□□□ -1.51
Rnf40-201ENSMUST00000033088 2310057N15RikQ9D6T8 200 aa5.59□□□□□ -1.51
Rnf40-201ENSMUST00000033088 Fam229aB2KGE5 128 aa5.59□□□□□ -1.52
Rnf40-201ENSMUST00000033088 BC029722A0A0N4SW31 51 aa5.58□□□□□ -1.52
Rnf40-201ENSMUST00000033088 Camk2n1Q6QWF9 78 aa5.57□□□□□ -1.52
Rnf40-201ENSMUST00000033088 ApobE9Q414 4505 aa5.53□□□□□ -1.52
Rnf40-201ENSMUST00000033088 Stard9Q80TF6 4561 aa5.53□□□□□ -1.52
Rnf40-201ENSMUST00000033088 Ryr3A2AGL3 4863 aa5.53□□□□□ -1.52
Rnf40-201ENSMUST00000033088 Dync1h1Q9JHU4 4644 aaKnown RBP5.52□□□□□ -1.53
Rnf40-201ENSMUST00000033088 Gm10318A0A1W2P728 225 aa5.52□□□□□ -1.53
Rnf40-201ENSMUST00000033088 A930033H14RikG5E8X6 103 aa5.51□□□□□ -1.53
Rnf40-201ENSMUST00000033088 Fat1A0A1L1SQU7 4645 aa5.5□□□□□ -1.53
Rnf40-201ENSMUST00000033088 Hectd4E9Q2E4 4418 aa5.47□□□□□ -1.53
Rnf40-201ENSMUST00000033088 Lrp1bQ9JI18 4599 aa5.47□□□□□ -1.53
Rnf40-201ENSMUST00000033088 Pkhd1E9PZ36 4059 aa5.45□□□□□ -1.54
Rnf40-201ENSMUST00000033088 Ryr2E9Q401 4966 aaKnown RBP5.44□□□□□ -1.54
Rnf40-201ENSMUST00000033088 Krtap3-2Q9D638 99 aa5.4□□□□□ -1.55
Rnf40-201ENSMUST00000033088 Krtap3-3Q9D7P0 99 aa5.4□□□□□ -1.55
Rnf40-201ENSMUST00000033088 Gm11939A2A592 99 aa5.37□□□□□ -1.55
Rnf40-201ENSMUST00000033088 B930094E09RikQ8C4T2 136 aa5.36□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 205.5 ms