RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 DmdP11531 3678 aa9.73□□□□□ -0.85
Col17a1-201ENSMUST00000026045 Chd9Q8BYH8 2885 aa9.71□□□□□ -0.85
Col17a1-201ENSMUST00000026045 Camk2n1Q6QWF9 78 aa9.71□□□□□ -0.86
Col17a1-201ENSMUST00000026045 Zfhx3Q61329 3726 aa9.7□□□□□ -0.86
Col17a1-201ENSMUST00000026045 Sec61bQ9CQS8 96 aaKnown RBP9.69□□□□□ -0.86
Col17a1-201ENSMUST00000026045 SpegQ62407 3262 aa9.68□□□□□ -0.86
Col17a1-201ENSMUST00000026045 Gm19426M0QWC7 77 aa9.66□□□□□ -0.86
Col17a1-201ENSMUST00000026045 2310061N02RikQ9D6S9 174 aa9.66□□□□□ -0.86
Col17a1-201ENSMUST00000026045 Vps13cQ8BX70 3748 aa9.65□□□□□ -0.87
Col17a1-201ENSMUST00000026045 Prm2P07978 107 aa9.64□□□□□ -0.87
Col17a1-201ENSMUST00000026045 Krtap13O88375 197 aa9.62□□□□□ -0.87
Col17a1-201ENSMUST00000026045 Krtap10-4Q08EG8 221 aa9.58□□□□□ -0.88
Col17a1-201ENSMUST00000026045 Akap9Q70FJ1 3797 aa9.57□□□□□ -0.88
Col17a1-201ENSMUST00000026045 Nf1Q04690 2841 aa9.57□□□□□ -0.88
Col17a1-201ENSMUST00000026045 Krtap15-1Q9QZU5 150 aa9.56□□□□□ -0.88
Col17a1-201ENSMUST00000026045 2310050C09RikG5E8Z3 280 aa9.56□□□□□ -0.88
Col17a1-201ENSMUST00000026045 Tenm3Q9WTS6 2715 aa9.55□□□□□ -0.88
Col17a1-201ENSMUST00000026045 ApcQ61315 2845 aa9.55□□□□□ -0.88
Col17a1-201ENSMUST00000026045 TgO08710 2766 aa9.54□□□□□ -0.88
Col17a1-201ENSMUST00000026045 LrbaQ9ESE1 2856 aa9.51□□□□□ -0.89
Col17a1-201ENSMUST00000026045 D6Ertd527eA0A0N4SWI3 464 aa9.46□□□□□ -0.89
Col17a1-201ENSMUST00000026045 Pdzd2E9Q1M1 2796 aa9.46□□□□□ -0.89
Col17a1-201ENSMUST00000026045 Srrm2Q8BTI8 2703 aaKnown RBP9.45□□□□□ -0.9
Col17a1-201ENSMUST00000026045 BC029722A0A0N4SW31 51 aa9.44□□□□□ -0.9
Col17a1-201ENSMUST00000026045 Krtap10-10A0A1W2P7T6 217 aa9.41□□□□□ -0.9
Col17a1-201ENSMUST00000026045 Tenm4Q3UHK6 2771 aa9.41□□□□□ -0.9
Col17a1-201ENSMUST00000026045 FcgbpE9Q0B5 2583 aa9.4□□□□□ -0.91
Col17a1-201ENSMUST00000026045 Gm21887J3QQ04 176 aa9.37□□□□□ -0.91
Col17a1-201ENSMUST00000026045 Csmd1Q923L3 3564 aa9.37□□□□□ -0.91
Col17a1-201ENSMUST00000026045 Gm5767A0A0J9YTU8 78 aa9.34□□□□□ -0.91
Col17a1-201ENSMUST00000026045 Tnp2P11378 117 aa9.34□□□□□ -0.91
Col17a1-201ENSMUST00000026045 Gm20537G3UYK7 97 aa9.32□□□□□ -0.92
Col17a1-201ENSMUST00000026045 Muc5acE9QAQ8 3455 aa9.31□□□□□ -0.92
Col17a1-201ENSMUST00000026045 Helz2E9QAM5 2947 aaKnown RBP9.3□□□□□ -0.92
Col17a1-201ENSMUST00000026045 Gm40193A0A1B0GT39 78 aa9.28□□□□□ -0.92
Col17a1-201ENSMUST00000026045 SpenQ62504 3644 aaKnown RBP9.27□□□□□ -0.92
Col17a1-201ENSMUST00000026045 Smg1Q8BKX6 3658 aaKnown RBP9.27□□□□□ -0.93
Col17a1-201ENSMUST00000026045 Gm5965D3Z724 196 aa9.23□□□□□ -0.93
Col17a1-201ENSMUST00000026045 Gm2696A0A1W2P709 240 aa9.2□□□□□ -0.94
Col17a1-201ENSMUST00000026045 Zfhx4Q9JJN2 3550 aa9.2□□□□□ -0.94
Col17a1-201ENSMUST00000026045 Lama5Q61001 3718 aa9.17□□□□□ -0.94
Col17a1-201ENSMUST00000026045 2310057N15RikQ9D6T8 200 aa9.11□□□□□ -0.95
Col17a1-201ENSMUST00000026045 Rps29P62274 56 aa9.09□□□□□ -0.95
Col17a1-201ENSMUST00000026045 Gm884A2A9H6 3643 aa9.08□□□□□ -0.96
Col17a1-201ENSMUST00000026045 OtogO55225 2910 aa9.05□□□□□ -0.96
Col17a1-201ENSMUST00000026045 2310079G19RikQ9D6L6 185 aa8.9□□□□□ -0.98
Col17a1-201ENSMUST00000026045 Tnp1P10856 55 aa8.9□□□□□ -0.98
Col17a1-201ENSMUST00000026045 Tenm1Q9WTS4 2731 aa8.82□□□□□ -1
Col17a1-201ENSMUST00000026045 A930033H14RikG5E8X6 103 aa8.81□□□□□ -1
Col17a1-201ENSMUST00000026045 Svep1A2AVA0 3567 aa8.8□□□□□ -1
Col17a1-201ENSMUST00000026045 B930094E09RikQ8C4T2 136 aa8.79□□□□□ -1
Col17a1-201ENSMUST00000026045 Cmya5Q70KF4 3739 aa8.74□□□□□ -1.01
Col17a1-201ENSMUST00000026045 Tenm2Q9WTS5 2764 aa8.72□□□□□ -1.01
Col17a1-201ENSMUST00000026045 Fbn1Q61554 2873 aaKnown RBP8.72□□□□□ -1.01
Col17a1-201ENSMUST00000026045 Muc4Q8JZM8 3443 aa8.62□□□□□ -1.03
Col17a1-201ENSMUST00000026045 VwfQ8CIZ8 2813 aa8.61□□□□□ -1.03
Col17a1-201ENSMUST00000026045 Ank2Q8C8R3 3898 aa8.46□□□□□ -1.05
Col17a1-201ENSMUST00000026045 Gm9736A0A1W2P7N1 277 aa8.41□□□□□ -1.06
Col17a1-201ENSMUST00000026045 Csmd2V9GX34 3611 aa8.39□□□□□ -1.07
Col17a1-201ENSMUST00000026045 Col7a1Q63870 2944 aa8.37□□□□□ -1.07
Col17a1-201ENSMUST00000026045 Gm9918Q8BUR5 174 aa8.33□□□□□ -1.08
Col17a1-201ENSMUST00000026045 Gm17402F6Z0L5 76 aa8.26□□□□□ -1.09
Col17a1-201ENSMUST00000026045 Megf8P60882 2789 aa8.26□□□□□ -1.09
Col17a1-201ENSMUST00000026045 Gm17416Q30KP4 66 aa8.21□□□□□ -1.09
Col17a1-201ENSMUST00000026045 Muc6Q80T03 2850 aa8.16□□□□□ -1.1
Col17a1-201ENSMUST00000026045 Gm11939A2A592 99 aa8.15□□□□□ -1.1
Col17a1-201ENSMUST00000026045 2210017I01RikA0A0A6YVV1 95 aa8.12□□□□□ -1.11
Col17a1-201ENSMUST00000026045 LystP97412 3788 aa8.03□□□□□ -1.12
Col17a1-201ENSMUST00000026045 Dnah14A0A140LIJ4 4489 aa8.02□□□□□ -1.13
Col17a1-201ENSMUST00000026045 Krtap19-5O08632 62 aa8.01□□□□□ -1.13
Col17a1-201ENSMUST00000026045 CubnQ9JLB4 3623 aa8□□□□□ -1.13
Col17a1-201ENSMUST00000026045 Krtap3-2Q9D638 99 aa7.98□□□□□ -1.13
Col17a1-201ENSMUST00000026045 Krtap3-3Q9D7P0 99 aa7.98□□□□□ -1.13
Col17a1-201ENSMUST00000026045 4933428G20RikQ9D3X4 101 aa7.91□□□□□ -1.14
Col17a1-201ENSMUST00000026045 Gm10318A0A1W2P728 225 aa7.88□□□□□ -1.15
Col17a1-201ENSMUST00000026045 Krtap13-1Q8K198 168 aa7.85□□□□□ -1.15
Col17a1-201ENSMUST00000026045 Huwe1Q7TMY8 4377 aaKnown RBP7.82□□□□□ -1.16
Col17a1-201ENSMUST00000026045 Gm19668J3QMD1 248 aa7.77□□□□□ -1.17
Col17a1-201ENSMUST00000026045 Krtap7-1Q9D3I6 87 aa7.76□□□□□ -1.17
Col17a1-201ENSMUST00000026045 Xirp2Q4U4S6 3784 aa7.76□□□□□ -1.17
Col17a1-201ENSMUST00000026045 BsnO88737 3942 aa7.74□□□□□ -1.17
Col17a1-201ENSMUST00000026045 Krtap3-1A2A591 98 aa7.74□□□□□ -1.17
Col17a1-201ENSMUST00000026045 Crct1Q6PAI5 102 aa7.72□□□□□ -1.17
Col17a1-201ENSMUST00000026045 Dnah10D3YYQ8 4591 aa7.72□□□□□ -1.17
Col17a1-201ENSMUST00000026045 Hspg2Q05793 3707 aaKnown RBP7.64□□□□□ -1.19
Col17a1-201ENSMUST00000026045 Dnah17Q69Z23 4481 aa7.59□□□□□ -1.2
Col17a1-201ENSMUST00000026045 Dnah5Q8VHE6 4621 aa7.58□□□□□ -1.2
Col17a1-201ENSMUST00000026045 Csmd3Q80T79 3707 aa7.57□□□□□ -1.2
Col17a1-201ENSMUST00000026045 Vps13dB1ART2 4390 aa7.45□□□□□ -1.22
Col17a1-201ENSMUST00000026045 PlecQ9QXS1 4691 aaKnown RBP7.43□□□□□ -1.22
Col17a1-201ENSMUST00000026045 Stard9Q80TF6 4561 aa7.41□□□□□ -1.22
Col17a1-201ENSMUST00000026045 Dnah11E9Q7N9 4488 aa7.4□□□□□ -1.22
Col17a1-201ENSMUST00000026045 Dnah7bL7N1Y0 4068 aa7.35□□□□□ -1.23
Col17a1-201ENSMUST00000026045 Dnah9B1AR51 4484 aa7.3□□□□□ -1.24
Col17a1-201ENSMUST00000026045 Sprr2a3Q4KL71 83 aa7.22□□□□□ -1.25
Col17a1-201ENSMUST00000026045 Sprr2a1Q9CQK8 83 aa7.22□□□□□ -1.25
Col17a1-201ENSMUST00000026045 Dync2h1Q45VK7 4306 aa7.2□□□□□ -1.26
Col17a1-201ENSMUST00000026045 Krtap1-5A2A590 122 aa7.19□□□□□ -1.26
Col17a1-201ENSMUST00000026045 TnxbO35452 4006 aa7.16□□□□□ -1.26
Col17a1-201ENSMUST00000026045 ApobE9Q414 4505 aa7.13□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 428.8 ms