RNA–Protein interactions for RNA: ENSMUST00000021288.9

Usp43-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp43, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-201ENSMUST00000021288 2310061N02RikQ9D6S9 174 aa9.27□□□□□ -0.92
Usp43-201ENSMUST00000021288 Gm21798J3QNU5 87 aa9.26□□□□□ -0.93
Usp43-201ENSMUST00000021288 Fbn1Q61554 2873 aaKnown RBP9.25□□□□□ -0.93
Usp43-201ENSMUST00000021288 Uqcr11Q9CPX8 56 aa9.24□□□□□ -0.93
Usp43-201ENSMUST00000021288 Gm26620Q9CY65 116 aa9.23□□□□□ -0.93
Usp43-201ENSMUST00000021288 Krtap10-10A0A1W2P7T6 217 aa9.21□□□□□ -0.94
Usp43-201ENSMUST00000021288 SmcpP15265 143 aa9.2□□□□□ -0.94
Usp43-201ENSMUST00000021288 VwfQ8CIZ8 2813 aa9.2□□□□□ -0.94
Usp43-201ENSMUST00000021288 2310050C09RikG5E8Z3 280 aa9.19□□□□□ -0.94
Usp43-201ENSMUST00000021288 Csmd2V9GX34 3611 aa9.18□□□□□ -0.94
Usp43-201ENSMUST00000021288 Gm12216A0A1W2P827 62 aa9.16□□□□□ -0.94
Usp43-201ENSMUST00000021288 Gm16253D3Z167 63 aa9.16□□□□□ -0.94
Usp43-201ENSMUST00000021288 Gm37013Q8K491 104 aa9.16□□□□□ -0.94
Usp43-201ENSMUST00000021288 Tenm2Q9WTS5 2764 aa9.11□□□□□ -0.95
Usp43-201ENSMUST00000021288 Krtap29-1A2A5X4 342 aa9.1□□□□□ -0.95
Usp43-201ENSMUST00000021288 Rnase13Q5GAM7 153 aa9.1□□□□□ -0.95
Usp43-201ENSMUST00000021288 Krtap14O08640 167 aa9.08□□□□□ -0.96
Usp43-201ENSMUST00000021288 Gm4491E0CX42 125 aa9.05□□□□□ -0.96
Usp43-201ENSMUST00000021288 CubnQ9JLB4 3623 aa9□□□□□ -0.97
Usp43-201ENSMUST00000021288 Gm10643Q3URG9 111 aa9□□□□□ -0.97
Usp43-201ENSMUST00000021288 Gm2696A0A1W2P709 240 aa8.98□□□□□ -0.97
Usp43-201ENSMUST00000021288 Gm3880A0A1B0GSB3 72 aa8.96□□□□□ -0.97
Usp43-201ENSMUST00000021288 Krtap15-1Q9QZU5 150 aa8.94□□□□□ -0.98
Usp43-201ENSMUST00000021288 Gm2310J3QNJ2 377 aa8.93□□□□□ -0.98
Usp43-201ENSMUST00000021288 Muc6Q80T03 2850 aa8.88□□□□□ -0.99
Usp43-201ENSMUST00000021288 Gm3646F6S692 53 aa8.87□□□□□ -0.99
Usp43-201ENSMUST00000021288 Tnp2P11378 117 aa8.8□□□□□ -1
Usp43-201ENSMUST00000021288 Gm9821Q8K076 103 aa8.8□□□□□ -1
Usp43-201ENSMUST00000021288 Megf8P60882 2789 aa8.79□□□□□ -1
Usp43-201ENSMUST00000021288 LystP97412 3788 aa8.78□□□□□ -1
Usp43-201ENSMUST00000021288 CriptO70333 101 aa8.77□□□□□ -1.01
Usp43-201ENSMUST00000021288 4933415A04RikQ9D443 101 aa8.76□□□□□ -1.01
Usp43-201ENSMUST00000021288 Mp68P56379 58 aa8.75□□□□□ -1.01
Usp43-201ENSMUST00000021288 Gm9955Q8CEJ8 102 aa8.67□□□□□ -1.02
Usp43-201ENSMUST00000021288 Gm5767A0A0J9YTU8 78 aa8.66□□□□□ -1.02
Usp43-201ENSMUST00000021288 Spink7Q6IE32 76 aa8.59□□□□□ -1.03
Usp43-201ENSMUST00000021288 1700042G07RikB1AUF7 90 aa8.55□□□□□ -1.04
Usp43-201ENSMUST00000021288 Ank2Q8C8R3 3898 aa8.54□□□□□ -1.04
Usp43-201ENSMUST00000021288 D6Ertd527eA0A0N4SWI3 464 aa8.46□□□□□ -1.06
Usp43-201ENSMUST00000021288 Gm5965D3Z724 196 aa8.41□□□□□ -1.06
Usp43-201ENSMUST00000021288 Rpl37Q9D823 97 aa8.41□□□□□ -1.06
Usp43-201ENSMUST00000021288 Cox6b2Q80ZN9 88 aa8.41□□□□□ -1.06
Usp43-201ENSMUST00000021288 Gm10382Q3V0T5 144 aa8.4□□□□□ -1.07
Usp43-201ENSMUST00000021288 Rps29P62274 56 aa8.31□□□□□ -1.08
Usp43-201ENSMUST00000021288 Fam229aB2KGE5 128 aa8.29□□□□□ -1.08
Usp43-201ENSMUST00000021288 Xirp2Q4U4S6 3784 aa8.29□□□□□ -1.08
Usp43-201ENSMUST00000021288 Sec61bQ9CQS8 96 aaKnown RBP8.29□□□□□ -1.08
Usp43-201ENSMUST00000021288 BC029722A0A0N4SW31 51 aa8.27□□□□□ -1.09
Usp43-201ENSMUST00000021288 Romo1P60603 79 aa8.27□□□□□ -1.09
Usp43-201ENSMUST00000021288 Hspg2Q05793 3707 aaKnown RBP8.25□□□□□ -1.09
Usp43-201ENSMUST00000021288 Pla2g10Q9QXX3 151 aa8.24□□□□□ -1.09
Usp43-201ENSMUST00000021288 Gm9918Q8BUR5 174 aa8.23□□□□□ -1.09
Usp43-201ENSMUST00000021288 Gm9736A0A1W2P7N1 277 aa8.19□□□□□ -1.1
Usp43-201ENSMUST00000021288 Csmd3Q80T79 3707 aa8.18□□□□□ -1.1
Usp43-201ENSMUST00000021288 2310057N15RikQ9D6T8 200 aa8.17□□□□□ -1.1
Usp43-201ENSMUST00000021288 Gm19426M0QWC7 77 aa8.15□□□□□ -1.1
Usp43-201ENSMUST00000021288 Dnah14A0A140LIJ4 4489 aa8.15□□□□□ -1.1
Usp43-201ENSMUST00000021288 Camk2n1Q6QWF9 78 aa8.12□□□□□ -1.11
Usp43-201ENSMUST00000021288 2310079G19RikQ9D6L6 185 aa8.11□□□□□ -1.11
Usp43-201ENSMUST00000021288 BsnO88737 3942 aa8.08□□□□□ -1.12
Usp43-201ENSMUST00000021288 Gm20537G3UYK7 97 aa8.05□□□□□ -1.12
Usp43-201ENSMUST00000021288 A930033H14RikG5E8X6 103 aa8.01□□□□□ -1.13
Usp43-201ENSMUST00000021288 Dnah10D3YYQ8 4591 aa7.91□□□□□ -1.14
Usp43-201ENSMUST00000021288 Gm11939A2A592 99 aa7.85□□□□□ -1.15
Usp43-201ENSMUST00000021288 Gm20538F6Z9R1 75 aa7.79□□□□□ -1.16
Usp43-201ENSMUST00000021288 Gm10318A0A1W2P728 225 aa7.74□□□□□ -1.17
Usp43-201ENSMUST00000021288 Krtap19-5O08632 62 aa7.74□□□□□ -1.17
Usp43-201ENSMUST00000021288 Huwe1Q7TMY8 4377 aaKnown RBP7.73□□□□□ -1.17
Usp43-201ENSMUST00000021288 Krtap3-2Q9D638 99 aa7.69□□□□□ -1.18
Usp43-201ENSMUST00000021288 Krtap3-3Q9D7P0 99 aa7.69□□□□□ -1.18
Usp43-201ENSMUST00000021288 Gm21887J3QQ04 176 aa7.68□□□□□ -1.18
Usp43-201ENSMUST00000021288 Ndufaf8A2AMZ4 74 aa7.64□□□□□ -1.19
Usp43-201ENSMUST00000021288 Gm17416Q30KP4 66 aa7.64□□□□□ -1.19
Usp43-201ENSMUST00000021288 B930094E09RikQ8C4T2 136 aa7.63□□□□□ -1.19
Usp43-201ENSMUST00000021288 Dnah7bL7N1Y0 4068 aa7.63□□□□□ -1.19
Usp43-201ENSMUST00000021288 Dnah5Q8VHE6 4621 aa7.6□□□□□ -1.19
Usp43-201ENSMUST00000021288 2210017I01RikA0A0A6YVV1 95 aa7.57□□□□□ -1.2
Usp43-201ENSMUST00000021288 Crct1Q6PAI5 102 aa7.56□□□□□ -1.2
Usp43-201ENSMUST00000021288 PlecQ9QXS1 4691 aaKnown RBP7.55□□□□□ -1.2
Usp43-201ENSMUST00000021288 Dnah11E9Q7N9 4488 aa7.49□□□□□ -1.21
Usp43-201ENSMUST00000021288 Dnah17Q69Z23 4481 aa7.49□□□□□ -1.21
Usp43-201ENSMUST00000021288 Dnah9B1AR51 4484 aa7.44□□□□□ -1.22
Usp43-201ENSMUST00000021288 Stard9Q80TF6 4561 aa7.42□□□□□ -1.22
Usp43-201ENSMUST00000021288 Krtap13-1Q8K198 168 aa7.4□□□□□ -1.22
Usp43-201ENSMUST00000021288 Vps13dB1ART2 4390 aa7.4□□□□□ -1.22
Usp43-201ENSMUST00000021288 Ryr1E9PZQ0 5035 aa7.36□□□□□ -1.23
Usp43-201ENSMUST00000021288 Krtap3-1A2A591 98 aa7.31□□□□□ -1.24
Usp43-201ENSMUST00000021288 Lrp1bQ9JI18 4599 aa7.29□□□□□ -1.24
Usp43-201ENSMUST00000021288 Kmt2aP55200 3966 aa7.26□□□□□ -1.25
Usp43-201ENSMUST00000021288 Gm40193A0A1B0GT39 78 aa7.26□□□□□ -1.25
Usp43-201ENSMUST00000021288 Tnp1P10856 55 aa7.25□□□□□ -1.25
Usp43-201ENSMUST00000021288 PrkdcP97313 4128 aa7.21□□□□□ -1.25
Usp43-201ENSMUST00000021288 Mycbp2Q7TPH6 4711 aa7.19□□□□□ -1.26
Usp43-201ENSMUST00000021288 Ryr3A2AGL3 4863 aa7.17□□□□□ -1.26
Usp43-201ENSMUST00000021288 Gm9112A2AI92 75 aa7.15□□□□□ -1.26
Usp43-201ENSMUST00000021288 TnxbO35452 4006 aa7.15□□□□□ -1.27
Usp43-201ENSMUST00000021288 ApobE9Q414 4505 aa7.14□□□□□ -1.27
Usp43-201ENSMUST00000021288 HydinQ80W93 5154 aa7.12□□□□□ -1.27
Usp43-201ENSMUST00000021288 Gm17402F6Z0L5 76 aa7.1□□□□□ -1.27
Usp43-201ENSMUST00000021288 Dnah2P0C6F1 4456 aa7.09□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms