RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Gm8439G3UWA7 96 aa5.19□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Pla2g1bQ9Z0Y2 146 aa5.19□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Itpr2Q9Z329 2701 aa5.19□□□□□ -1.58
Bdnf-211ENSMUST00000176893 LystP97412 3788 aa5.18□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Wfdc13Q5DQQ6 81 aa5.18□□□□□ -1.58
Bdnf-211ENSMUST00000176893 2010109I03RikQ9CQ11 111 aa5.18□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Gm16181B0V2H2 73 aa5.18□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Krtap24-1G3X9A2 248 aa5.18□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Ighv3-1A0A075B5S6 116 aa5.18□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Cdc42se2Q8BGH7 84 aa5.18□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Defb40Q70KL2 73 aa5.17□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Sprr2jO70561 109 aa5.17□□□□□ -1.58
Bdnf-211ENSMUST00000176893 NipblQ6KCD5 2798 aaKnown RBP5.17□□□□□ -1.58
Bdnf-211ENSMUST00000176893 2210017I01RikA0A0A6YVV1 95 aa5.17□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Gm10490F6VBM2 120 aa5.17□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Prh1P05142 261 aa5.15□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Romo1P60603 79 aa5.15□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Q8BGJ3 129 aa5.15□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Gpha2Q925Q5 128 aa5.15□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Svep1A2AVA0 3567 aa5.15□□□□□ -1.58
Bdnf-211ENSMUST00000176893 Rnase1P00683 149 aa5.15□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Gm10509O88255 85 aa5.14□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Mrps21P58059 87 aa5.14□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Gm7276Q3TYW4 209 aa5.14□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Igkv1-88A0A140T8N1 120 aa5.13□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Elof1P60003 83 aa5.13□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Smim29Q8R043 75 aa5.13□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Wfdc12Q9JHY3 85 aa5.13□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Gm20661K7N787 53 aa5.12□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Defb38Q7TNV7 63 aa5.12□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Gm10553J3QPF1 123 aa5.12□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Lelp1Q9DAE3 120 aa5.12□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Cox7bP56393 80 aa5.12□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Cela2aP05208 271 aa5.11□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Col7a1Q63870 2944 aa5.11□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Gm9112A2AI92 75 aa5.11□□□□□ -1.59
Bdnf-211ENSMUST00000176893 A930009A15RikG3UYI6 118 aa5.11□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Usmg5Q78IK2 58 aa5.11□□□□□ -1.59
Bdnf-211ENSMUST00000176893 RetnlbQ99P86 105 aa5.11□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Igkv8-28A0A0G2JE47 121 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Igkv8-19A0A0G2JFN8 121 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Gm7257D3YX25 99 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Gm10267M0QWD8 85 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 A330070K13RikQ8CA53 115 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Msrb1Q9JLC3 116 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Defb50Q6TU36 73 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Pdzd2E9Q1M1 2796 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 OtogO55225 2910 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Gm6217A0A1Y7VJK9 128 aa5.1□□□□□ -1.59
Bdnf-211ENSMUST00000176893 Defb37Q7TMD2 62 aa5.09□□□□□ -1.59
Bdnf-211ENSMUST00000176893 E130116L18RikQ8BMV6 101 aa5.09□□□□□ -1.59
Bdnf-211ENSMUST00000176893 C130032M10RikQ8C888 123 aa5.09□□□□□ -1.59
Bdnf-211ENSMUST00000176893 2310057N15RikQ9D6T8 200 aa5.09□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Igkv3-2A0A075B5P0 119 aa5.08□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Ighv2-7A0A075B5Q8 116 aa5.08□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Q99M08 65 aa5.08□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Wfdc10Q3V2J9 124 aa5.08□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Mrpl34Q99N91 92 aa5.08□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Krtap26-1Q9D7N2 215 aa5.08□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Gm7137J3QMW1 236 aa5.07□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Nop10Q9CQS2 64 aa5.06□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Ndufaf8A2AMZ4 74 aa5.05□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Wfdc15aQ8BH89 80 aa5.05□□□□□ -1.6
Bdnf-211ENSMUST00000176893 A730071L15RikQ8C4X0 137 aa5.05□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Tenm3Q9WTS6 2715 aa5.05□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Igkv3-5A0A140T8M6 119 aa5.05□□□□□ -1.6
Bdnf-211ENSMUST00000176893 Sprr3O09116 238 aa5.02□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Igkv3-9A0A140T8P4 119 aa5.02□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Krtap11-1E9Q2E9 183 aa5.02□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Stab2Q8R4U0 2559 aa5.02□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Cox6a2P43023 97 aa5.01□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Chchd7Q8K2Q5 85 aa5.01□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Gm21886J3QJU9 214 aa5□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Tnp2P11378 117 aa5□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Lypd5Q9D7Z7 256 aa5□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Gm10226O88253 85 aa5□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Gm27235Q3UW50 83 aa5□□□□□ -1.61
Bdnf-211ENSMUST00000176893 Csmd2V9GX34 3611 aa4.96□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Uqcr11Q9CPX8 56 aa4.96□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Megf8P60882 2789 aa4.96□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Gm4707V9GXN5 68 aa4.96□□□□□ -1.62
Bdnf-211ENSMUST00000176893 6030445D17RikE9Q8F9 148 aa4.95□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Srrm2Q8BTI8 2703 aaKnown RBP4.95□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Gm7138L7N2C3 230 aa4.94□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Gm3238W4VSP7 230 aa4.94□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Gm10772F7AIG4 85 aa4.93□□□□□ -1.62
Bdnf-211ENSMUST00000176893 PrcdQ00LT2 53 aa4.93□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Gm36176A0A1W2P8D5 158 aa4.92□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Rpl37aP61514 92 aa4.91□□□□□ -1.62
Bdnf-211ENSMUST00000176893 Camk2n1Q6QWF9 78 aa4.91□□□□□ -1.62
Bdnf-211ENSMUST00000176893 1700018G05RikA0A1B0GSI2 66 aa4.89□□□□□ -1.63
Bdnf-211ENSMUST00000176893 Fbn1Q61554 2873 aaKnown RBP4.89□□□□□ -1.63
Bdnf-211ENSMUST00000176893 Gm43218A0A0G2JGT0 114 aa4.88□□□□□ -1.63
Bdnf-211ENSMUST00000176893 AY074887Q8R5F9 132 aa4.88□□□□□ -1.63
Bdnf-211ENSMUST00000176893 Wfdc17Q5SSJ1 76 aa4.88□□□□□ -1.63
Bdnf-211ENSMUST00000176893 Gm37013Q8K491 104 aa4.87□□□□□ -1.63
Bdnf-211ENSMUST00000176893 PrlhG3UWC3 86 aa4.86□□□□□ -1.63
Bdnf-211ENSMUST00000176893 PscaP57096 123 aa4.86□□□□□ -1.63
Bdnf-211ENSMUST00000176893 Sprr1bQ62267 153 aa4.86□□□□□ -1.63
Bdnf-211ENSMUST00000176893 Tenm1Q9WTS4 2731 aa4.86□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms