RNA–Protein interactions for RNA: ENSMUST00000172269.1

Sptbn4-207, Transcript of Spectrin beta chain, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Sptbn4, Length 8,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-207ENSMUST00000172269 Plac8Q9JI48 112 aa11.72□□□□□ -0.53
Sptbn4-207ENSMUST00000172269 Fam229bQ8CF36 80 aa11.7□□□□□ -0.54
Sptbn4-207ENSMUST00000172269 Tnrc18Q80WC3 2878 aa11.69□□□□□ -0.54
Sptbn4-207ENSMUST00000172269 Odf3bQ5M8M2 238 aa11.69□□□□□ -0.54
Sptbn4-207ENSMUST00000172269 Romo1P60603 79 aa11.68□□□□□ -0.54
Sptbn4-207ENSMUST00000172269 Gm3285A0A1W2P7U0 201 aa11.67□□□□□ -0.54
Sptbn4-207ENSMUST00000172269 Smim29Q8R043 75 aa11.64□□□□□ -0.55
Sptbn4-207ENSMUST00000172269 Itpr1P11881 2749 aa11.62□□□□□ -0.55
Sptbn4-207ENSMUST00000172269 Rpl37Q9D823 97 aa11.61□□□□□ -0.55
Sptbn4-207ENSMUST00000172269 Sec61bQ9CQS8 96 aaKnown RBP11.6□□□□□ -0.55
Sptbn4-207ENSMUST00000172269 Prune2Q52KR3 3084 aa11.57□□□□□ -0.56
Sptbn4-207ENSMUST00000172269 Stab2Q8R4U0 2559 aa11.56□□□□□ -0.56
Sptbn4-207ENSMUST00000172269 Cep350E9Q309 3095 aa11.55□□□□□ -0.56
Sptbn4-207ENSMUST00000172269 Gm37013Q8K491 104 aa11.55□□□□□ -0.56
Sptbn4-207ENSMUST00000172269 Gm10320E9PW43 113 aa11.52□□□□□ -0.56
Sptbn4-207ENSMUST00000172269 Itpr2Q9Z329 2701 aa11.51□□□□□ -0.57
Sptbn4-207ENSMUST00000172269 Gm3646F6S692 53 aa11.5□□□□□ -0.57
Sptbn4-207ENSMUST00000172269 Krtap15-1Q9QZU5 150 aa11.48□□□□□ -0.57
Sptbn4-207ENSMUST00000172269 Utp20Q5XG71 2788 aaKnown RBP11.47□□□□□ -0.57
Sptbn4-207ENSMUST00000172269 ApcQ61315 2845 aa11.45□□□□□ -0.58
Sptbn4-207ENSMUST00000172269 BC029722A0A0N4SW31 51 aa11.44□□□□□ -0.58
Sptbn4-207ENSMUST00000172269 Gm10139O88245 57 aa11.44□□□□□ -0.58
Sptbn4-207ENSMUST00000172269 Pkd1l1Q8R526 2615 aa11.42□□□□□ -0.58
Sptbn4-207ENSMUST00000172269 Gm10382Q3V0T5 144 aa11.42□□□□□ -0.58
Sptbn4-207ENSMUST00000172269 Gm3250E9Q1M3 230 aa11.42□□□□□ -0.58
Sptbn4-207ENSMUST00000172269 Gm11565A2A4M7 156 aa11.4□□□□□ -0.58
Sptbn4-207ENSMUST00000172269 Gm16253D3Z167 63 aa11.37□□□□□ -0.59
Sptbn4-207ENSMUST00000172269 Nbeal2Q6ZQA0 2742 aa11.36□□□□□ -0.59
Sptbn4-207ENSMUST00000172269 Gm19426M0QWC7 77 aa11.34□□□□□ -0.59
Sptbn4-207ENSMUST00000172269 Ash1lQ99MY8 2958 aa11.32□□□□□ -0.6
Sptbn4-207ENSMUST00000172269 Tex15F8VPN2 2785 aa11.3□□□□□ -0.6
Sptbn4-207ENSMUST00000172269 1700042G07RikB1AUF7 90 aa11.29□□□□□ -0.6
Sptbn4-207ENSMUST00000172269 Cox6b2Q80ZN9 88 aa11.28□□□□□ -0.6
Sptbn4-207ENSMUST00000172269 Ubr5Q80TP3 2792 aa11.27□□□□□ -0.61
Sptbn4-207ENSMUST00000172269 Lama2Q60675 3118 aaKnown RBP11.27□□□□□ -0.61
Sptbn4-207ENSMUST00000172269 Gm5767A0A0J9YTU8 78 aa11.25□□□□□ -0.61
Sptbn4-207ENSMUST00000172269 Sprr1aQ62266 144 aa11.22□□□□□ -0.61
Sptbn4-207ENSMUST00000172269 Dmxl1Q6PNC0 3013 aa11.21□□□□□ -0.62
Sptbn4-207ENSMUST00000172269 UtrnE9Q6R7 3430 aa11.2□□□□□ -0.62
Sptbn4-207ENSMUST00000172269 MgaA2AWL7 3003 aaKnown RBP11.17□□□□□ -0.62
Sptbn4-207ENSMUST00000172269 Muc2Q80Z19 2680 aa11.14□□□□□ -0.63
Sptbn4-207ENSMUST00000172269 Bod1lE9Q6J5 3032 aa11.14□□□□□ -0.63
Sptbn4-207ENSMUST00000172269 Fbn2Q61555 2907 aa11.12□□□□□ -0.63
Sptbn4-207ENSMUST00000172269 Krtap29-1A2A5X4 342 aa11.1□□□□□ -0.63
Sptbn4-207ENSMUST00000172269 Cystm1Q8K353 104 aa11.1□□□□□ -0.63
Sptbn4-207ENSMUST00000172269 4933415A04RikQ9D443 101 aa11.1□□□□□ -0.63
Sptbn4-207ENSMUST00000172269 Ranbp2Q9ERU9 3053 aaKnown RBP11.1□□□□□ -0.63
Sptbn4-207ENSMUST00000172269 A730071L15RikQ8C4X0 137 aa11.08□□□□□ -0.64
Sptbn4-207ENSMUST00000172269 Chd7A2AJK6 2986 aaKnown RBP11.06□□□□□ -0.64
Sptbn4-207ENSMUST00000172269 2310050C09RikG5E8Z3 280 aa11.04□□□□□ -0.64
Sptbn4-207ENSMUST00000172269 Ndufaf8A2AMZ4 74 aa11.04□□□□□ -0.64
Sptbn4-207ENSMUST00000172269 FrylF8VQ05 3007 aa11.03□□□□□ -0.64
Sptbn4-207ENSMUST00000172269 Rps29P62274 56 aa10.99□□□□□ -0.65
Sptbn4-207ENSMUST00000172269 Srrm2Q8BTI8 2703 aaKnown RBP10.97□□□□□ -0.65
Sptbn4-207ENSMUST00000172269 DspE9Q557 2883 aaKnown RBP10.95□□□□□ -0.66
Sptbn4-207ENSMUST00000172269 Zzef1Q5SSH7 2924 aa10.92□□□□□ -0.66
Sptbn4-207ENSMUST00000172269 KalrnA2CG49 2964 aa10.92□□□□□ -0.66
Sptbn4-207ENSMUST00000172269 Hivep1Q03172 2688 aa10.88□□□□□ -0.67
Sptbn4-207ENSMUST00000172269 TrioQ0KL02 3102 aa10.88□□□□□ -0.67
Sptbn4-207ENSMUST00000172269 Gm40193A0A1B0GT39 78 aa10.88□□□□□ -0.67
Sptbn4-207ENSMUST00000172269 Vps13aQ5H8C4 3166 aa10.87□□□□□ -0.67
Sptbn4-207ENSMUST00000172269 Usp34Q6ZQ93 3582 aa10.85□□□□□ -0.67
Sptbn4-207ENSMUST00000172269 BptfA2A654 3036 aaKnown RBP10.85□□□□□ -0.67
Sptbn4-207ENSMUST00000172269 Gm3233E9Q2H5 230 aa10.82□□□□□ -0.68
Sptbn4-207ENSMUST00000172269 Gm7173A0A0G2JEB6 3132 aa10.81□□□□□ -0.68
Sptbn4-207ENSMUST00000172269 Tnp1P10856 55 aa10.81□□□□□ -0.68
Sptbn4-207ENSMUST00000172269 Myo15bI7HPW8 3033 aa10.79□□□□□ -0.68
Sptbn4-207ENSMUST00000172269 TgO08710 2766 aa10.78□□□□□ -0.68
Sptbn4-207ENSMUST00000172269 FcgbpE9Q0B5 2583 aa10.76□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Igfn1Q3KNY0 2849 aa10.76□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 FryE9Q8I9 3020 aa10.75□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Gm17349F7BGH6 99 aa10.75□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Gm9112A2AI92 75 aa10.74□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Rev3lQ61493 3122 aa10.74□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Cfap54Q8C6S9 3106 aa10.74□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Mki67E9PVX6 3177 aaKnown RBP10.74□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Gm2310J3QNJ2 377 aa10.73□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Lama3Q61789 3330 aa10.72□□□□□ -0.69
Sptbn4-207ENSMUST00000172269 Gm7138L7N2C3 230 aa10.71□□□□□ -0.7
Sptbn4-207ENSMUST00000172269 Gm3238W4VSP7 230 aa10.71□□□□□ -0.7
Sptbn4-207ENSMUST00000172269 Gm21887J3QQ04 176 aa10.69□□□□□ -0.7
Sptbn4-207ENSMUST00000172269 Pdzd2E9Q1M1 2796 aa10.65□□□□□ -0.7
Sptbn4-207ENSMUST00000172269 AtmQ62388 3066 aa10.64□□□□□ -0.71
Sptbn4-207ENSMUST00000172269 SmcpP15265 143 aa10.63□□□□□ -0.71
Sptbn4-207ENSMUST00000172269 Wdfy4E9Q2M9 3149 aa10.59□□□□□ -0.71
Sptbn4-207ENSMUST00000172269 FlncQ8VHX6 2726 aaKnown RBP10.58□□□□□ -0.72
Sptbn4-207ENSMUST00000172269 Gm9508A0A1W2P7W0 230 aa10.57□□□□□ -0.72
Sptbn4-207ENSMUST00000172269 Tenm1Q9WTS4 2731 aa10.55□□□□□ -0.72
Sptbn4-207ENSMUST00000172269 Col12a1Q60847 3120 aa10.55□□□□□ -0.72
Sptbn4-207ENSMUST00000172269 Chd9Q8BYH8 2885 aa10.52□□□□□ -0.73
Sptbn4-207ENSMUST00000172269 Krtap14O08640 167 aa10.51□□□□□ -0.73
Sptbn4-207ENSMUST00000172269 Krtap13O88375 197 aa10.51□□□□□ -0.73
Sptbn4-207ENSMUST00000172269 Nf1Q04690 2841 aa10.5□□□□□ -0.73
Sptbn4-207ENSMUST00000172269 Gm7137J3QMW1 236 aa10.49□□□□□ -0.73
Sptbn4-207ENSMUST00000172269 Lelp1Q9DAE3 120 aa10.49□□□□□ -0.73
Sptbn4-207ENSMUST00000172269 Unc80Q8BLN6 3261 aa10.47□□□□□ -0.73
Sptbn4-207ENSMUST00000172269 NbeaQ9EPN1 2936 aa10.45□□□□□ -0.74
Sptbn4-207ENSMUST00000172269 D6Ertd527eA0A0N4SWI3 464 aa10.43□□□□□ -0.74
Sptbn4-207ENSMUST00000172269 Celsr1O35161 3034 aa10.36□□□□□ -0.75
Sptbn4-207ENSMUST00000172269 HttP42859 3119 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 71.7 ms