RNA–Protein interactions for RNA: ENSMUST00000121058.1

Hmgb1-ps5-201, mousemouse

BASIC

Gene Hmgb1-ps5, Length 557 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps5-201ENSMUST00000121058 Rps27lQ6ZWY3 84 aaKnown RBP1.44□□□□□ -2.18
Hmgb1-ps5-201ENSMUST00000121058 Krtap6-2O08884 159 aa1.42□□□□□ -2.18
Hmgb1-ps5-201ENSMUST00000121058 Gm16253D3Z167 63 aa1.41□□□□□ -2.18
Hmgb1-ps5-201ENSMUST00000121058 Cd24P24807 76 aa1.41□□□□□ -2.18
Hmgb1-ps5-201ENSMUST00000121058 Clpsl2Q3UW21 102 aa1.41□□□□□ -2.18
Hmgb1-ps5-201ENSMUST00000121058 Cnot1Q6ZQ08 2375 aaKnown RBP1.41□□□□□ -2.18
Hmgb1-ps5-201ENSMUST00000121058 Rpl39lQ9CQD0 51 aa1.4□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Col6a6Q8C6K9 2265 aa1.39□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Krtap4-16Q91W93 202 aa1.37□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Abca4O35600 2310 aa1.37□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Defb33Q30KN3 62 aa1.36□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Ash1lQ99MY8 2958 aa1.35□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Fbn1Q61554 2873 aaKnown RBP1.35□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Sprr2fO70557 76 aa1.35□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Kntc1Q8C3Y4 2207 aa1.35□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 Prp2P05143 317 aa1.34□□□□□ -2.19
Hmgb1-ps5-201ENSMUST00000121058 ClcP97400 68 aa1.33□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Akap13E9Q394 2776 aa1.33□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Defb25Q30KN8 71 aa1.32□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Minos1Q7TNS2 76 aa1.32□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Krtap19-2Q925I0 141 aa1.32□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 PrcdQ00LT2 53 aa1.31□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Krtap21-1Q925H4 128 aa1.31□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Armcx4E9PWM3 2356 aa1.3□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Gm17606F6ZL36 78 aa1.3□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 1110025L11RikO09048 78 aa1.3□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Smim11aQ99J19 55 aa1.29□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 Spink12Q9D256 87 aa1.29□□□□□ -2.2
Hmgb1-ps5-201ENSMUST00000121058 P0C1Z5 52 aa1.27□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Polr2kQ63871 58 aa1.27□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 FcgbpE9Q0B5 2583 aa1.26□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Spag11Q8K4N2 71 aa1.26□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Gm4707V9GXN5 68 aa1.26□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Myo15bI7HPW8 3033 aa1.26□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Muc2Q80Z19 2680 aa1.25□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Sptbn2Q68FG2 2388 aa1.25□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Sec16aA2AIX1 2377 aa1.24□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Spink7Q6IE32 76 aa1.24□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 2310046K23RikA0A0A6YVW6 87 aa1.23□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Igfn1Q3KNY0 2849 aa1.22□□□□□ -2.21
Hmgb1-ps5-201ENSMUST00000121058 Gm19426M0QWC7 77 aa1.21□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Krtap19-4Q925H7 84 aa1.21□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Wfdc15bQ9JHY4 80 aa1.21□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Sptbn1Q62261 2363 aaKnown RBP1.19□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Hivep2Q3UHF7 2430 aa1.18□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Sprr2kO70562 68 aa1.18□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Tnp1P10856 55 aa1.18□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Rpl39P62892 51 aa1.18□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Abca2P41234 2434 aa1.18□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Zfp462B1AWL2 2495 aaKnown RBP1.17□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 PolqQ8CGS6 2544 aa1.17□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Defb48Q3UW22 87 aa1.17□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Defb50Q6TU36 73 aa1.16□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Gm9999Q8C5Y2 53 aa1.16□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Gm42715A0A087WP63 3095 aaKnown RBP1.15□□□□□ -2.22
Hmgb1-ps5-201ENSMUST00000121058 Defb38Q7TNV7 63 aa1.14□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Chd6A3KFM7 2711 aa1.14□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Helz2E9QAM5 2947 aaKnown RBP1.13□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Abca12E9Q876 2595 aa1.13□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 CicQ924A2 2510 aa1.13□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Wfdc15aQ8BH89 80 aa1.12□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Nop10Q9CQS2 64 aa1.12□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Notch1Q01705 2531 aa1.11□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Prrc2cQ3TLH4 2846 aaKnown RBP1.11□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Gm10999F6Q4M4 69 aa1.11□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Tnrc18Q80WC3 2878 aa1.1□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 BptfA2A654 3036 aaKnown RBP1.1□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 TprF6ZDS4 2431 aaKnown RBP1.09□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Sprr2eO70556 76 aa1.09□□□□□ -2.23
Hmgb1-ps5-201ENSMUST00000121058 Hmcn1D3YXG0 5634 aa1.09□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Fam208bQ5DTT3 2382 aa1.08□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Csmd3Q80T79 3707 aa1.08□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Gm17402F6Z0L5 76 aa1.08□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Gpr98Q8VHN7 6298 aaKnown RBP1.07□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Defb40Q70KL2 73 aa1.07□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Lce3bQ9CQM7 98 aa1.06□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 AtrxQ61687 2476 aaKnown RBP1.05□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Tep1P97499 2629 aa1.04□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Defb30Q30KN4 75 aa1.04□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Gm9195A0A140LHT4 2805 aa1.04□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Ubr5Q80TP3 2792 aa1.03□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 MgaA2AWL7 3003 aaKnown RBP1.03□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Rif1Q6PR54 2419 aaKnown RBP1.03□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 HrnrQ8VHD8 2496 aa1.03□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Gm11627A6PWP4 55 aa1.03□□□□□ -2.24
Hmgb1-ps5-201ENSMUST00000121058 Ep300B2RWS6 2412 aa1.03□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Fat1A0A1L1SQU7 4645 aa1.01□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Tenm4Q3UHK6 2771 aa1.01□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Defb1P56386 69 aa1□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 PcntP48725 2898 aa1□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Rev3lQ61493 3122 aa1□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Zfhx2Q2MHN3 2562 aa1□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Ncor2Q9WU42 2472 aaKnown RBP0.99□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Ankrd11E9Q4F7 2643 aa0.98□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Fn1P11276 2477 aaKnown RBP0.98□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Ttc28Q80XJ3 2450 aa0.98□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 CrebbpP45481 2441 aa0.98□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Ros1Q78DX7 2340 aa0.97□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Sprr2dO70555 85 aa0.97□□□□□ -2.25
Hmgb1-ps5-201ENSMUST00000121058 Sprr2gO70558 76 aa0.97□□□□□ -2.25
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms