RNA–Protein interactions for RNA: ENSMUST00000121058.1

Hmgb1-ps5-201, mousemouse

BASIC

Gene Hmgb1-ps5, Length 557 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps5-201ENSMUST00000121058 Chic1Q8CBW7 227 aa17.08■□□□□ 0.32
Hmgb1-ps5-201ENSMUST00000121058 Mapk8ip2Q9ERE9 830 aa16.66■□□□□ 0.26
Hmgb1-ps5-201ENSMUST00000121058 Phf23Q8BSN5 401 aa15.44■□□□□ 0.06
Hmgb1-ps5-201ENSMUST00000121058 Plppr3Q7TPB0 716 aa14.87□□□□□ -0.03
Hmgb1-ps5-201ENSMUST00000121058 Gab3Q8BSM5 595 aa14.74□□□□□ -0.05
Hmgb1-ps5-201ENSMUST00000121058 Senp3Q9EP97 568 aaKnown RBP14.15□□□□□ -0.14
Hmgb1-ps5-201ENSMUST00000121058 Kcna4Q61423 654 aa13.66□□□□□ -0.22
Hmgb1-ps5-201ENSMUST00000121058 Trap1aP19473 224 aa12.45□□□□□ -0.42
Hmgb1-ps5-201ENSMUST00000121058 Hoxd11P23813 323 aa12.43□□□□□ -0.42
Hmgb1-ps5-201ENSMUST00000121058 Fam163aQ8CAA5 168 aa12.34□□□□□ -0.43
Hmgb1-ps5-201ENSMUST00000121058 Dmrt2Q8BG36 561 aa12.19□□□□□ -0.46
Hmgb1-ps5-201ENSMUST00000121058 Ppargc1bQ8VHJ7 1014 aa12.05□□□□□ -0.48
Hmgb1-ps5-201ENSMUST00000121058 Znf219Q6IQX8 726 aa11.91□□□□□ -0.5
Hmgb1-ps5-201ENSMUST00000121058 Chrna2Q91X60 512 aa11.78□□□□□ -0.52
Hmgb1-ps5-201ENSMUST00000121058 Rsph4aQ8BYM7 716 aa11.68□□□□□ -0.54
Hmgb1-ps5-201ENSMUST00000121058 Slc4a1apE9PX68 744 aa11.64□□□□□ -0.55
Hmgb1-ps5-201ENSMUST00000121058 Atf5O70191 283 aa11.62□□□□□ -0.55
Hmgb1-ps5-201ENSMUST00000121058 Rimbp2Q80U40 1072 aa11.56□□□□□ -0.56
Hmgb1-ps5-201ENSMUST00000121058 Dnajc5bQ9CQ94 199 aa11.44□□□□□ -0.58
Hmgb1-ps5-201ENSMUST00000121058 Ppp4r2Q0VGB7 417 aa11.42□□□□□ -0.58
Hmgb1-ps5-201ENSMUST00000121058 Hs6st3Q9QYK4 470 aa11.38□□□□□ -0.59
Hmgb1-ps5-201ENSMUST00000121058 ArsiQ32KI9 573 aa11.37□□□□□ -0.59
Hmgb1-ps5-201ENSMUST00000121058 Akt1s1Q9D1F4 257 aa11.27□□□□□ -0.61
Hmgb1-ps5-201ENSMUST00000121058 1700123L14RikQ3V2K7 440 aa11.17□□□□□ -0.62
Hmgb1-ps5-201ENSMUST00000121058 Slc34a2Q9DBP0 697 aa11.05□□□□□ -0.64
Hmgb1-ps5-201ENSMUST00000121058 Bach1P97302 739 aa11.04□□□□□ -0.64
Hmgb1-ps5-201ENSMUST00000121058 Sox12Q04890 314 aa10.83□□□□□ -0.68
Hmgb1-ps5-201ENSMUST00000121058 Fam71e1A1L3C1 212 aa10.75□□□□□ -0.69
Hmgb1-ps5-201ENSMUST00000121058 WdpcpQ8C456 722 aa10.73□□□□□ -0.69
Hmgb1-ps5-201ENSMUST00000121058 Cdca7Q9D0M2 382 aa10.64□□□□□ -0.71
Hmgb1-ps5-201ENSMUST00000121058 Nlrp6Q91WS2 869 aa10.62□□□□□ -0.71
Hmgb1-ps5-201ENSMUST00000121058 Ube2uB1AUC4 352 aa10.57□□□□□ -0.72
Hmgb1-ps5-201ENSMUST00000121058 C1qtnf12Q8R2Z0 308 aa10.57□□□□□ -0.72
Hmgb1-ps5-201ENSMUST00000121058 Pde4cQ3UEI1 686 aa10.42□□□□□ -0.74
Hmgb1-ps5-201ENSMUST00000121058 AcrbpQ3V140 540 aa10.42□□□□□ -0.74
Hmgb1-ps5-201ENSMUST00000121058 G430095P16RikE9Q913 147 aa10.35□□□□□ -0.75
Hmgb1-ps5-201ENSMUST00000121058 Ms4a5Q810P8 197 aa10.35□□□□□ -0.75
Hmgb1-ps5-201ENSMUST00000121058 Riok3Q9DBU3 519 aaKnown RBP10.35□□□□□ -0.75
Hmgb1-ps5-201ENSMUST00000121058 Zbtb7aO88939 569 aaKnown RBP10.32□□□□□ -0.76
Hmgb1-ps5-201ENSMUST00000121058 Egfem1Q8C088 590 aa10.32□□□□□ -0.76
Hmgb1-ps5-201ENSMUST00000121058 Ifnlr1Q8CGK5 535 aa10.31□□□□□ -0.76
Hmgb1-ps5-201ENSMUST00000121058 Npm2Q80W85 207 aa10.26□□□□□ -0.77
Hmgb1-ps5-201ENSMUST00000121058 MyclP10166 368 aa10.25□□□□□ -0.77
Hmgb1-ps5-201ENSMUST00000121058 Grwd1Q810D6 446 aaKnown RBP10.24□□□□□ -0.77
Hmgb1-ps5-201ENSMUST00000121058 Znf704Q9ERQ3 566 aa10.22□□□□□ -0.77
Hmgb1-ps5-201ENSMUST00000121058 Prm3Q62100 101 aa10.19□□□□□ -0.78
Hmgb1-ps5-201ENSMUST00000121058 Trim41Q5NCC3 630 aa10.17□□□□□ -0.78
Hmgb1-ps5-201ENSMUST00000121058 Slc4a5E9Q3M5 1116 aa10.16□□□□□ -0.78
Hmgb1-ps5-201ENSMUST00000121058 Abcb7Q61102 752 aaKnown RBP10.15□□□□□ -0.78
Hmgb1-ps5-201ENSMUST00000121058 GapdhsQ64467 440 aa10.13□□□□□ -0.79
Hmgb1-ps5-201ENSMUST00000121058 Tshz2Q68FE9 1030 aa10.13□□□□□ -0.79
Hmgb1-ps5-201ENSMUST00000121058 Rtn4Q99P72 1162 aaKnown RBP10.12□□□□□ -0.79
Hmgb1-ps5-201ENSMUST00000121058 Styxl1Q9DAR2 321 aa10.08□□□□□ -0.8
Hmgb1-ps5-201ENSMUST00000121058 Zbtb12Q9Z150 459 aa10.08□□□□□ -0.8
Hmgb1-ps5-201ENSMUST00000121058 Gtpbp6Q3U6U5 514 aa10.05□□□□□ -0.8
Hmgb1-ps5-201ENSMUST00000121058 Rnf216P58283 853 aa10.04□□□□□ -0.8
Hmgb1-ps5-201ENSMUST00000121058 Nkx1-1G3UXB3 402 aa9.97□□□□□ -0.81
Hmgb1-ps5-201ENSMUST00000121058 Fbln2P37889 1221 aa9.9□□□□□ -0.82
Hmgb1-ps5-201ENSMUST00000121058 Npm3Q9CPP0 175 aaKnown RBP9.85□□□□□ -0.83
Hmgb1-ps5-201ENSMUST00000121058 MpndQ3TV65 487 aa9.84□□□□□ -0.83
Hmgb1-ps5-201ENSMUST00000121058 Ehmt2Q9Z148 1263 aaKnown RBP9.82□□□□□ -0.84
Hmgb1-ps5-201ENSMUST00000121058 Tcf3P15806 651 aa9.67□□□□□ -0.86
Hmgb1-ps5-201ENSMUST00000121058 Skida1Q80YR3 822 aa9.66□□□□□ -0.86
Hmgb1-ps5-201ENSMUST00000121058 Ppp1r37Q8BKR5 712 aa9.64□□□□□ -0.87
Hmgb1-ps5-201ENSMUST00000121058 Ecm2Q5FW85 670 aa9.59□□□□□ -0.87
Hmgb1-ps5-201ENSMUST00000121058 Pitpnm1O35954 1243 aa9.54□□□□□ -0.88
Hmgb1-ps5-201ENSMUST00000121058 Kcnn1Q9EQR3 537 aa9.5□□□□□ -0.89
Hmgb1-ps5-201ENSMUST00000121058 Prr29B1ARI9 187 aa9.49□□□□□ -0.89
Hmgb1-ps5-201ENSMUST00000121058 Znf703P0CL69 594 aa9.49□□□□□ -0.89
Hmgb1-ps5-201ENSMUST00000121058 Trim35Q8C006 501 aa9.49□□□□□ -0.89
Hmgb1-ps5-201ENSMUST00000121058 Ildr2B5TVM2 661 aa9.48□□□□□ -0.89
Hmgb1-ps5-201ENSMUST00000121058 Lrrc43Q3V0L5 667 aa9.46□□□□□ -0.9
Hmgb1-ps5-201ENSMUST00000121058 Jarid2Q62315 1234 aa9.45□□□□□ -0.9
Hmgb1-ps5-201ENSMUST00000121058 Prdm10Q3UTQ7 1184 aa9.39□□□□□ -0.91
Hmgb1-ps5-201ENSMUST00000121058 Pip4p2Q9CZX7 257 aa9.39□□□□□ -0.91
Hmgb1-ps5-201ENSMUST00000121058 Kank3Q9Z1P7 791 aa9.38□□□□□ -0.91
Hmgb1-ps5-201ENSMUST00000121058 Cadps2Q8BYR5 1297 aa9.34□□□□□ -0.91
Hmgb1-ps5-201ENSMUST00000121058 Cacnb1Q8R3Z5 597 aa9.34□□□□□ -0.91
Hmgb1-ps5-201ENSMUST00000121058 Nyap1Q6PFX7 833 aa9.29□□□□□ -0.92
Hmgb1-ps5-201ENSMUST00000121058 Clcn6O35454 870 aa9.24□□□□□ -0.93
Hmgb1-ps5-201ENSMUST00000121058 Sra1Q80VJ2 232 aa9.23□□□□□ -0.93
Hmgb1-ps5-201ENSMUST00000121058 MycnP03966 462 aaKnown RBP9.19□□□□□ -0.94
Hmgb1-ps5-201ENSMUST00000121058 Ppp6r1Q7TSI3 856 aa9.19□□□□□ -0.94
Hmgb1-ps5-201ENSMUST00000121058 Hnrnpul2Q00PI9 745 aaKnown RBP9.15□□□□□ -0.94
Hmgb1-ps5-201ENSMUST00000121058 Pde4dQ01063 747 aa9.15□□□□□ -0.94
Hmgb1-ps5-201ENSMUST00000121058 Repin1Q5U4E2 545 aa9.14□□□□□ -0.95
Hmgb1-ps5-201ENSMUST00000121058 Spock2Q9ER58 423 aa9.13□□□□□ -0.95
Hmgb1-ps5-201ENSMUST00000121058 Fam117bQ3U3E2 584 aa9.12□□□□□ -0.95
Hmgb1-ps5-201ENSMUST00000121058 SnphQ80U23 495 aa9.12□□□□□ -0.95
Hmgb1-ps5-201ENSMUST00000121058 Hdac5Q9Z2V6 1113 aa9.11□□□□□ -0.95
Hmgb1-ps5-201ENSMUST00000121058 Dok7Q18PE0 504 aa9.05□□□□□ -0.96
Hmgb1-ps5-201ENSMUST00000121058 Zbtb7bQ64321 544 aa9.03□□□□□ -0.96
Hmgb1-ps5-201ENSMUST00000121058 PygbQ8CI94 843 aaKnown RBP9.03□□□□□ -0.96
Hmgb1-ps5-201ENSMUST00000121058 CrebzfQ91ZR3 358 aa9□□□□□ -0.97
Hmgb1-ps5-201ENSMUST00000121058 Zbtb22Q9Z0G7 638 aa9□□□□□ -0.97
Hmgb1-ps5-201ENSMUST00000121058 Atad2Q8CDM1 1040 aa8.99□□□□□ -0.97
Hmgb1-ps5-201ENSMUST00000121058 Ferd3lQ923Z4 168 aa8.99□□□□□ -0.97
Hmgb1-ps5-201ENSMUST00000121058 Gm13697A2AK42 830 aa8.98□□□□□ -0.97
Hmgb1-ps5-201ENSMUST00000121058 TimelessQ9R1X4 1197 aa8.95□□□□□ -0.98
Hmgb1-ps5-201ENSMUST00000121058 Pdap1Q3UHX2 181 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms