RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 Ube2bP63147 152 aa16.37■□□□□ 0.21
Ccdc9-202ENSMUST00000118976 Nbeal2Q6ZQA0 2742 aa16.36■□□□□ 0.21
Ccdc9-202ENSMUST00000118976 Gm28374F6SG70 93 aa16.36■□□□□ 0.21
Ccdc9-202ENSMUST00000118976 PolqQ8CGS6 2544 aa16.35■□□□□ 0.21
Ccdc9-202ENSMUST00000118976 Sox16Q62247 57 aa16.35■□□□□ 0.21
Ccdc9-202ENSMUST00000118976 A0A286YE49 62 aa16.34■□□□□ 0.21
Ccdc9-202ENSMUST00000118976 4933415A04RikQ9D443 101 aa16.34■□□□□ 0.21
Ccdc9-202ENSMUST00000118976 U90926O08546 118 aa16.32■□□□□ 0.2
Ccdc9-202ENSMUST00000118976 Reg3aO09037 175 aa16.28■□□□□ 0.2
Ccdc9-202ENSMUST00000118976 Fam104aA2A6P4 185 aa16.27■□□□□ 0.2
Ccdc9-202ENSMUST00000118976 Zcchc13Q9D548 170 aa16.25■□□□□ 0.19
Ccdc9-202ENSMUST00000118976 1700074P13RikQ9D9G7 251 aa16.25■□□□□ 0.19
Ccdc9-202ENSMUST00000118976 Kmt2aP55200 3966 aa16.24■□□□□ 0.19
Ccdc9-202ENSMUST00000118976 Phxr4P15974 95 aa16.24■□□□□ 0.19
Ccdc9-202ENSMUST00000118976 Odf3bQ5M8M2 238 aa16.21■□□□□ 0.19
Ccdc9-202ENSMUST00000118976 CicQ924A2 2510 aa16.21■□□□□ 0.18
Ccdc9-202ENSMUST00000118976 Gm28230A0A0A0MQ91 144 aa16.17■□□□□ 0.18
Ccdc9-202ENSMUST00000118976 Chchd10Q7TNL9 138 aa16.17■□□□□ 0.18
Ccdc9-202ENSMUST00000118976 Tenm1Q9WTS4 2731 aa16.17■□□□□ 0.18
Ccdc9-202ENSMUST00000118976 B9d2Q3UK10 175 aa16.15■□□□□ 0.18
Ccdc9-202ENSMUST00000118976 Rpl37aP61514 92 aa16.14■□□□□ 0.17
Ccdc9-202ENSMUST00000118976 Dnah3Q8BW94 4083 aa16.14■□□□□ 0.17
Ccdc9-202ENSMUST00000118976 Fbn1Q61554 2873 aaKnown RBP16.12■□□□□ 0.17
Ccdc9-202ENSMUST00000118976 PtprqP0C5E4 2300 aa16.12■□□□□ 0.17
Ccdc9-202ENSMUST00000118976 Gm10139O88245 57 aa16.11■□□□□ 0.17
Ccdc9-202ENSMUST00000118976 Wfdc13Q5DQQ6 81 aa16.11■□□□□ 0.17
Ccdc9-202ENSMUST00000118976 Sec61gP60060 68 aa16.1■□□□□ 0.17
Ccdc9-202ENSMUST00000118976 Notch2O35516 2470 aa16.1■□□□□ 0.17
Ccdc9-202ENSMUST00000118976 Chtf8P0CG14 533 aa16.07■□□□□ 0.16
Ccdc9-202ENSMUST00000118976 Tenm4Q3UHK6 2771 aa16.07■□□□□ 0.16
Ccdc9-202ENSMUST00000118976 Gm2310J3QNJ2 377 aa16.06■□□□□ 0.16
Ccdc9-202ENSMUST00000118976 Gm20604F8WIA3 75 aa16.05■□□□□ 0.16
Ccdc9-202ENSMUST00000118976 Gm7138L7N2C3 230 aa16.03■□□□□ 0.16
Ccdc9-202ENSMUST00000118976 Ube2aQ9Z255 152 aa16.03■□□□□ 0.16
Ccdc9-202ENSMUST00000118976 Gm3238W4VSP7 230 aa16.03■□□□□ 0.16
Ccdc9-202ENSMUST00000118976 AtrQ9JKK8 2635 aa15.95■□□□□ 0.14
Ccdc9-202ENSMUST00000118976 Itpr2Q9Z329 2701 aa15.93■□□□□ 0.14
Ccdc9-202ENSMUST00000118976 Igkv3-7A0A0G2JE31 119 aa15.93■□□□□ 0.14
Ccdc9-202ENSMUST00000118976 SycnQ8VCK7 134 aa15.92■□□□□ 0.14
Ccdc9-202ENSMUST00000118976 Gm10267M0QWD8 85 aa15.91■□□□□ 0.14
Ccdc9-202ENSMUST00000118976 Dnah1E9Q8T7 4250 aa15.9■□□□□ 0.14
Ccdc9-202ENSMUST00000118976 9530053A07RikE9PVG8 2581 aa15.9■□□□□ 0.14
Ccdc9-202ENSMUST00000118976 Notch1Q01705 2531 aa15.89■□□□□ 0.13
Ccdc9-202ENSMUST00000118976 Gm10160F6Y577 67 aa15.87■□□□□ 0.13
Ccdc9-202ENSMUST00000118976 TgO08710 2766 aa15.86■□□□□ 0.13
Ccdc9-202ENSMUST00000118976 Sslp1Q3UN54 99 aa15.86■□□□□ 0.13
Ccdc9-202ENSMUST00000118976 Wfdc10Q3V2J9 124 aa15.85■□□□□ 0.13
Ccdc9-202ENSMUST00000118976 Phf5aP83870 110 aaKnown RBP15.82■□□□□ 0.12
Ccdc9-202ENSMUST00000118976 FlnbQ80X90 2602 aaKnown RBP15.78■□□□□ 0.12
Ccdc9-202ENSMUST00000118976 Dnah7bL7N1Y0 4068 aa15.78■□□□□ 0.12
Ccdc9-202ENSMUST00000118976 Gm10643Q3URG9 111 aa15.77■□□□□ 0.12
Ccdc9-202ENSMUST00000118976 Col6a5A6H584 2640 aa15.75■□□□□ 0.11
Ccdc9-202ENSMUST00000118976 HrnrQ8VHD8 2496 aa15.75■□□□□ 0.11
Ccdc9-202ENSMUST00000118976 Fn1P11276 2477 aaKnown RBP15.73■□□□□ 0.11
Ccdc9-202ENSMUST00000118976 Gm20661K7N787 53 aa15.73■□□□□ 0.11
Ccdc9-202ENSMUST00000118976 Dnah17Q69Z23 4481 aa15.72■□□□□ 0.11
Ccdc9-202ENSMUST00000118976 SptssbQ925E8 76 aa15.71■□□□□ 0.11
Ccdc9-202ENSMUST00000118976 Igkv3-5A0A140T8M6 119 aa15.7■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 Gm10837Q3UTT8 145 aa15.7■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 9230102O04RikA2ASX7 82 aa15.69■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 Igkv3-3A0A140T8Q0 119 aa15.67■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 1700042G07RikB1AUF7 90 aa15.67■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 Gm26620Q9CY65 116 aa15.67■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 Nsd1O88491 2588 aaKnown RBP15.67■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 Wfdc17Q5SSJ1 76 aa15.65■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 Srrm2Q8BTI8 2703 aaKnown RBP15.65■□□□□ 0.1
Ccdc9-202ENSMUST00000118976 Gm3646F6S692 53 aa15.64■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 Defb38Q7TNV7 63 aa15.64■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 2310061N02RikQ9D6S9 174 aa15.64■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 Ndufb1P0DN34 57 aa15.63■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 Gm27235Q3UW50 83 aa15.61■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 Defb10Q8R2I8 73 aa15.6■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 Stab1Q8R4Y4 2571 aa15.6■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 Csmd3Q80T79 3707 aa15.6■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 Defb9Q8R2I6 67 aa15.59■□□□□ 0.09
Ccdc9-202ENSMUST00000118976 Gm36176A0A1W2P8D5 158 aa15.58■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 Q8K1L6 76 aa15.58■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 Spata3Q9D9T6 193 aa15.58■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 6030445D17RikE9Q8F9 148 aa15.57■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 Tenm2Q9WTS5 2764 aa15.57■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 Hivep1Q03172 2688 aa15.55■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 AW011738F6S7Q2 159 aa15.54■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 Gm7137J3QMW1 236 aa15.54■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 Dnah14A0A140LIJ4 4489 aa15.53■□□□□ 0.08
Ccdc9-202ENSMUST00000118976 Dnah11E9Q7N9 4488 aa15.51■□□□□ 0.07
Ccdc9-202ENSMUST00000118976 Ccdc179J3QM76 67 aa15.49■□□□□ 0.07
Ccdc9-202ENSMUST00000118976 Dnah10D3YYQ8 4591 aa15.46■□□□□ 0.07
Ccdc9-202ENSMUST00000118976 Plac8Q9JI48 112 aa15.46■□□□□ 0.07
Ccdc9-202ENSMUST00000118976 Gm10642Q3TWM1 71 aa15.45■□□□□ 0.06
Ccdc9-202ENSMUST00000118976 1700012A03RikQ9DAF1 130 aa15.43■□□□□ 0.06
Ccdc9-202ENSMUST00000118976 VwfQ8CIZ8 2813 aa15.42■□□□□ 0.06
Ccdc9-202ENSMUST00000118976 Limd2Q8BGB5 128 aa15.4■□□□□ 0.06
Ccdc9-202ENSMUST00000118976 Megf8P60882 2789 aa15.4■□□□□ 0.06
Ccdc9-202ENSMUST00000118976 Dnah6E9Q0B6 4144 aa15.36■□□□□ 0.05
Ccdc9-202ENSMUST00000118976 Gm21798J3QNU5 87 aa15.35■□□□□ 0.05
Ccdc9-202ENSMUST00000118976 Nupr2Q497P3 102 aa15.34■□□□□ 0.05
Ccdc9-202ENSMUST00000118976 Uqcr11Q9CPX8 56 aa15.34■□□□□ 0.05
Ccdc9-202ENSMUST00000118976 Gm16253D3Z167 63 aa15.33■□□□□ 0.04
Ccdc9-202ENSMUST00000118976 Cypt14J3QPF7 87 aa15.33■□□□□ 0.04
Ccdc9-202ENSMUST00000118976 Gm10065F6TJM2 114 aa15.31■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms