RNA–Protein interactions for RNA: ENSMUST00000103059.1

Col9a3-201, Transcript of Collagen, type IX, alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a3, Length 2,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3-201ENSMUST00000103059 Igkv3-10A0A0G2JGN0 119 aa8.64□□□□□ -1.03
Col9a3-201ENSMUST00000103059 Sprr2jO70561 109 aa8.64□□□□□ -1.03
Col9a3-201ENSMUST00000103059 Igkv1-122A0A140T8M9 119 aa8.63□□□□□ -1.03
Col9a3-201ENSMUST00000103059 Igkv3-2A0A075B5P0 119 aa8.63□□□□□ -1.03
Col9a3-201ENSMUST00000103059 Smim29Q8R043 75 aa8.62□□□□□ -1.03
Col9a3-201ENSMUST00000103059 Dnah6E9Q0B6 4144 aa8.62□□□□□ -1.03
Col9a3-201ENSMUST00000103059 Igsf10Q3V1M1 2594 aa8.6□□□□□ -1.03
Col9a3-201ENSMUST00000103059 Defb12Q8K4N3 78 aa8.6□□□□□ -1.03
Col9a3-201ENSMUST00000103059 Defb10Q8R2I8 73 aa8.58□□□□□ -1.04
Col9a3-201ENSMUST00000103059 A0A286YE02 88 aa8.57□□□□□ -1.04
Col9a3-201ENSMUST00000103059 C130032M10RikQ8C888 123 aa8.57□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Fam168bQ80XQ8 194 aa8.56□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Stab2Q8R4U0 2559 aa8.55□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Pkd1l1Q8R526 2615 aa8.55□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Coa5Q99M07 74 aa8.55□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Igkv8-19A0A0G2JFN8 121 aa8.54□□□□□ -1.04
Col9a3-201ENSMUST00000103059 TgO08710 2766 aa8.54□□□□□ -1.04
Col9a3-201ENSMUST00000103059 4933415A04RikQ9D443 101 aa8.54□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Megf8P60882 2789 aa8.53□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Csmd3Q80T79 3707 aa8.53□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Gm7276Q3TYW4 209 aa8.53□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Sox16Q62247 57 aa8.53□□□□□ -1.04
Col9a3-201ENSMUST00000103059 Cox6a2P43023 97 aa8.52□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Mrpl34Q99N91 92 aa8.52□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Atox1O08997 68 aaKnown RBP8.52□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Muc6Q80T03 2850 aa8.51□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Gm9508A0A1W2P7W0 230 aa8.51□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Obox2E9PXV9 151 aa8.5□□□□□ -1.05
Col9a3-201ENSMUST00000103059 HrnrQ8VHD8 2496 aa8.49□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Gm11627A6PWP4 55 aa8.49□□□□□ -1.05
Col9a3-201ENSMUST00000103059 P84750 121 aa8.49□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Dmac1Q9CQ00 111 aa8.48□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Spata3Q9D9T6 193 aa8.48□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Sprr1aQ62266 144 aa8.48□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Wfdc6bF6ULY1 148 aa8.48□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Dnah17Q69Z23 4481 aa8.47□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Gm44790A0A0N4SV91 103 aa8.47□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Defb40Q70KL2 73 aa8.47□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Igkv3-12A0A140T8P0 119 aa8.46□□□□□ -1.05
Col9a3-201ENSMUST00000103059 Igkv3-4A0A140T8Q4 119 aa8.45□□□□□ -1.06
Col9a3-201ENSMUST00000103059 Dnah1E9Q8T7 4250 aa8.44□□□□□ -1.06
Col9a3-201ENSMUST00000103059 Tenm2Q9WTS5 2764 aa8.44□□□□□ -1.06
Col9a3-201ENSMUST00000103059 Ccdc179J3QM76 67 aa8.43□□□□□ -1.06
Col9a3-201ENSMUST00000103059 Ube2bP63147 152 aa8.43□□□□□ -1.06
Col9a3-201ENSMUST00000103059 9230102O04RikA2ASX7 82 aa8.42□□□□□ -1.06
Col9a3-201ENSMUST00000103059 Phxr4P15974 95 aa8.42□□□□□ -1.06
Col9a3-201ENSMUST00000103059 Prol1E9PYQ4 312 aa8.41□□□□□ -1.06
Col9a3-201ENSMUST00000103059 Gm37013Q8K491 104 aa8.4□□□□□ -1.06
Col9a3-201ENSMUST00000103059 PscaP57096 123 aa8.4□□□□□ -1.06
Col9a3-201ENSMUST00000103059 Gm17521F6QAC8 156 aa8.39□□□□□ -1.07
Col9a3-201ENSMUST00000103059 2310061N02RikQ9D6S9 174 aa8.38□□□□□ -1.07
Col9a3-201ENSMUST00000103059 Vpreb3D3Z6J4 130 aa8.38□□□□□ -1.07
Col9a3-201ENSMUST00000103059 Fam104aA2A6P4 185 aa8.37□□□□□ -1.07
Col9a3-201ENSMUST00000103059 SycnQ8VCK7 134 aa8.37□□□□□ -1.07
Col9a3-201ENSMUST00000103059 Wfdc13Q5DQQ6 81 aa8.36□□□□□ -1.07
Col9a3-201ENSMUST00000103059 B9d2Q3UK10 175 aa8.35□□□□□ -1.07
Col9a3-201ENSMUST00000103059 A0A286YE49 62 aa8.35□□□□□ -1.07
Col9a3-201ENSMUST00000103059 Gm10160F6Y577 67 aa8.35□□□□□ -1.07
Col9a3-201ENSMUST00000103059 Gm17349F7BGH6 99 aa8.34□□□□□ -1.07
Col9a3-201ENSMUST00000103059 Gm10837Q3UTT8 145 aa8.34□□□□□ -1.07
Col9a3-201ENSMUST00000103059 1700074P13RikQ9D9G7 251 aa8.34□□□□□ -1.07
Col9a3-201ENSMUST00000103059 Gm12353A2AGJ4 60 aa8.34□□□□□ -1.07
Col9a3-201ENSMUST00000103059 Gm21886J3QJU9 214 aa8.34□□□□□ -1.07
Col9a3-201ENSMUST00000103059 FasnP19096 2504 aaKnown RBP8.33□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Huwe1Q7TMY8 4377 aaKnown RBP8.32□□□□□ -1.08
Col9a3-201ENSMUST00000103059 1700018G05RikA0A1B0GSI2 66 aa8.32□□□□□ -1.08
Col9a3-201ENSMUST00000103059 U90926O08546 118 aa8.3□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Reg3aO09037 175 aa8.3□□□□□ -1.08
Col9a3-201ENSMUST00000103059 1700042G07RikB1AUF7 90 aa8.3□□□□□ -1.08
Col9a3-201ENSMUST00000103059 AW011738F6S7Q2 159 aa8.3□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Nupr2Q497P3 102 aa8.3□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Ube2aQ9Z255 152 aa8.29□□□□□ -1.08
Col9a3-201ENSMUST00000103059 TnxbO35452 4006 aa8.29□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Zcchc13Q9D548 170 aa8.29□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Dnah11E9Q7N9 4488 aa8.28□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Phf5aP83870 110 aaKnown RBP8.28□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Gm4707V9GXN5 68 aa8.28□□□□□ -1.08
Col9a3-201ENSMUST00000103059 Gm10643Q3URG9 111 aa8.26□□□□□ -1.09
Col9a3-201ENSMUST00000103059 1700012A03RikQ9DAF1 130 aa8.26□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Dnah9B1AR51 4484 aa8.26□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Gm26620Q9CY65 116 aa8.26□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Chtf8P0CG14 533 aa8.25□□□□□ -1.09
Col9a3-201ENSMUST00000103059 PrkdcP97313 4128 aa8.25□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Wfdc10Q3V2J9 124 aa8.24□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Igkv3-3A0A140T8Q0 119 aa8.23□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Dync2h1Q45VK7 4306 aa8.23□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Rpl37aP61514 92 aa8.22□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Plac8Q9JI48 112 aa8.22□□□□□ -1.09
Col9a3-201ENSMUST00000103059 Gm3646F6S692 53 aa8.21□□□□□ -1.1
Col9a3-201ENSMUST00000103059 Igkv3-7A0A0G2JE31 119 aa8.2□□□□□ -1.1
Col9a3-201ENSMUST00000103059 Gm9507D3Z5T3 223 aa8.2□□□□□ -1.1
Col9a3-201ENSMUST00000103059 Gm28230A0A0A0MQ91 144 aa8.19□□□□□ -1.1
Col9a3-201ENSMUST00000103059 SptssbQ925E8 76 aa8.19□□□□□ -1.1
Col9a3-201ENSMUST00000103059 Defb9Q8R2I6 67 aa8.19□□□□□ -1.1
Col9a3-201ENSMUST00000103059 Gm10139O88245 57 aa8.18□□□□□ -1.1
Col9a3-201ENSMUST00000103059 Gm10267M0QWD8 85 aa8.17□□□□□ -1.1
Col9a3-201ENSMUST00000103059 Odf3bQ5M8M2 238 aa8.17□□□□□ -1.1
Col9a3-201ENSMUST00000103059 FcgbpE9Q0B5 2583 aa8.16□□□□□ -1.1
Col9a3-201ENSMUST00000103059 Fras1Q80T14 4010 aa8.15□□□□□ -1.11
Col9a3-201ENSMUST00000103059 PlecQ9QXS1 4691 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 82.7 ms