RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Phf5aP83870 110 aaKnown RBP7.67□□□□□ -1.18
Vamp1-201ENSMUST00000032487 Krtap11-1E9Q2E9 183 aa7.67□□□□□ -1.18
Vamp1-201ENSMUST00000032487 Megf8P60882 2789 aa7.65□□□□□ -1.18
Vamp1-201ENSMUST00000032487 Igkv4-54A0A0G2JES9 117 aa7.65□□□□□ -1.18
Vamp1-201ENSMUST00000032487 Mrpl34Q99N91 92 aa7.65□□□□□ -1.18
Vamp1-201ENSMUST00000032487 PtprqP0C5E4 2300 aa7.64□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Gm7137J3QMW1 236 aa7.64□□□□□ -1.19
Vamp1-201ENSMUST00000032487 B9d2Q3UK10 175 aa7.64□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Igkv1-122A0A140T8M9 119 aa7.62□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Smim29Q8R043 75 aa7.62□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Gm7138L7N2C3 230 aa7.62□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Cox6a2P43023 97 aa7.62□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Gm3238W4VSP7 230 aa7.62□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Igkv3-9A0A140T8P4 119 aa7.61□□□□□ -1.19
Vamp1-201ENSMUST00000032487 VwfQ8CIZ8 2813 aa7.6□□□□□ -1.19
Vamp1-201ENSMUST00000032487 PrcdQ00LT2 53 aa7.6□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Gm44790A0A0N4SV91 103 aa7.59□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Gm7276Q3TYW4 209 aa7.59□□□□□ -1.19
Vamp1-201ENSMUST00000032487 Gm17577J3QNF7 156 aa7.59□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Defb40Q70KL2 73 aa7.59□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Igkv3-4A0A140T8Q4 119 aa7.58□□□□□ -1.2
Vamp1-201ENSMUST00000032487 SptssbQ925E8 76 aa7.57□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Gm37013Q8K491 104 aa7.57□□□□□ -1.2
Vamp1-201ENSMUST00000032487 A0A286YCN5 57 aa7.56□□□□□ -1.2
Vamp1-201ENSMUST00000032487 1700074P13RikQ9D9G7 251 aa7.54□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Phxr5P08399 672 aa7.54□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Cdk2ap2Q9CPY4 127 aa7.54□□□□□ -1.2
Vamp1-201ENSMUST00000032487 TnxbO35452 4006 aa7.53□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Igkv3-1A0A075B5P1 119 aa7.53□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Igkv3-7A0A0G2JE31 119 aa7.53□□□□□ -1.2
Vamp1-201ENSMUST00000032487 A0A286YE49 62 aa7.53□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Reg3bP35230 175 aa7.53□□□□□ -1.2
Vamp1-201ENSMUST00000032487 Gm9821Q8K076 103 aa7.52□□□□□ -1.21
Vamp1-201ENSMUST00000032487 Defb11Q8R2I7 77 aa7.51□□□□□ -1.21
Vamp1-201ENSMUST00000032487 Chtf8P0CG14 533 aa7.51□□□□□ -1.21
Vamp1-201ENSMUST00000032487 A730009L09RikA0A1B0GS82 72 aa7.48□□□□□ -1.21
Vamp1-201ENSMUST00000032487 Cox7b2Q9D2H1 82 aa7.48□□□□□ -1.21
Vamp1-201ENSMUST00000032487 Wfdc13Q5DQQ6 81 aa7.48□□□□□ -1.21
Vamp1-201ENSMUST00000032487 Zcchc13Q9D548 170 aa7.47□□□□□ -1.21
Vamp1-201ENSMUST00000032487 Gm17521F6QAC8 156 aa7.47□□□□□ -1.21
Vamp1-201ENSMUST00000032487 PscaP57096 123 aa7.47□□□□□ -1.21
Vamp1-201ENSMUST00000032487 Vpreb3D3Z6J4 130 aa7.46□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Igkv3-12A0A140T8P0 119 aa7.45□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Gm21886J3QJU9 214 aa7.45□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Gm16485Q8C4B7 115 aa7.45□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Gm20661K7N787 53 aa7.45□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Gm4707V9GXN5 68 aa7.44□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Reg3aO09037 175 aa7.44□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Dnah10D3YYQ8 4591 aa7.43□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Tenm2Q9WTS5 2764 aa7.43□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Ndufb1P0DN34 57 aa7.43□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Dnah6E9Q0B6 4144 aa7.42□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Camk2n2Q78WH7 79 aa7.42□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Muc6Q80T03 2850 aa7.42□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Notch1Q01705 2531 aa7.42□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Leap2Q91V13 76 aa7.42□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Plac8Q9JI48 112 aa7.42□□□□□ -1.22
Vamp1-201ENSMUST00000032487 1700018G05RikA0A1B0GSI2 66 aa7.41□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Pkd1l1Q8R526 2615 aa7.41□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Gm12353A2AGJ4 60 aa7.41□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Sprr4Q8CGN8 76 aa7.4□□□□□ -1.22
Vamp1-201ENSMUST00000032487 2310034C09RikQ9D746 214 aa7.4□□□□□ -1.22
Vamp1-201ENSMUST00000032487 Rpl37aP61514 92 aa7.38□□□□□ -1.23
Vamp1-201ENSMUST00000032487 FasnP19096 2504 aaKnown RBP7.38□□□□□ -1.23
Vamp1-201ENSMUST00000032487 Gm10267M0QWD8 85 aa7.36□□□□□ -1.23
Vamp1-201ENSMUST00000032487 Gm17349F7BGH6 99 aa7.36□□□□□ -1.23
Vamp1-201ENSMUST00000032487 Ighv8-13A0A075B5Y0 101 aa7.35□□□□□ -1.23
Vamp1-201ENSMUST00000032487 D730001G18RikA0A087WQU7 115 aa7.35□□□□□ -1.23
Vamp1-201ENSMUST00000032487 Dmac1Q9CQ00 111 aa7.35□□□□□ -1.23
Vamp1-201ENSMUST00000032487 P84750 121 aa7.33□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Ndufs5Q99LY9 106 aa7.33□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Prol1E9PYQ4 312 aa7.32□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Gm2310J3QNJ2 377 aa7.32□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Snhg11Q4G0K9 87 aa7.31□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Chchd10Q7TNL9 138 aa7.31□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Obox2E9PXV9 151 aa7.3□□□□□ -1.24
Vamp1-201ENSMUST00000032487 TgO08710 2766 aa7.3□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Dnah14A0A140LIJ4 4489 aa7.29□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Gm12216A0A1W2P827 62 aa7.29□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Defb38Q7TNV7 63 aa7.28□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Krtap10-10A0A1W2P7T6 217 aa7.28□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Sslp1Q3UN54 99 aa7.28□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Cmc4Q61908 68 aa7.28□□□□□ -1.24
Vamp1-201ENSMUST00000032487 Cypt15B1AXS0 87 aa7.27□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Odf3bQ5M8M2 238 aa7.27□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Limd2Q8BGB5 128 aa7.27□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Gm28230A0A0A0MQ91 144 aa7.26□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Prm2P07978 107 aa7.26□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Fam168bQ80XQ8 194 aa7.25□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Kmt2aP55200 3966 aa7.24□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Cypt14J3QPF7 87 aa7.24□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Gm11627A6PWP4 55 aa7.22□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Uqcr11Q9CPX8 56 aa7.22□□□□□ -1.25
Vamp1-201ENSMUST00000032487 Q8BGJ3 129 aa7.2□□□□□ -1.26
Vamp1-201ENSMUST00000032487 Sprr1aQ62266 144 aa7.19□□□□□ -1.26
Vamp1-201ENSMUST00000032487 Nupr2Q497P3 102 aa7.18□□□□□ -1.26
Vamp1-201ENSMUST00000032487 Sec61bQ9CQS8 96 aaKnown RBP7.17□□□□□ -1.26
Vamp1-201ENSMUST00000032487 Csmd3Q80T79 3707 aa7.16□□□□□ -1.26
Vamp1-201ENSMUST00000032487 Gm9508A0A1W2P7W0 230 aa7.14□□□□□ -1.27
Vamp1-201ENSMUST00000032487 1700012A03RikQ9DAF1 130 aa7.14□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 75.3 ms