RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 2310061N02RikQ9D6S9 174 aa12.55□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 Ube2bP63147 152 aa12.53□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 B9d2Q3UK10 175 aa12.53□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 Dnah7bL7N1Y0 4068 aa12.53□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 Prr15lQ8JZM2 100 aa12.53□□□□□ -0.4
Ccdc34-201ENSMUST00000028580 Zcchc13Q9D548 170 aa12.51□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 Gm44790A0A0N4SV91 103 aa12.5□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 Gm17521F6QAC8 156 aa12.5□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 Q8BT88 171 aa12.5□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 VwfQ8CIZ8 2813 aa12.5□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 Igsf10Q3V1M1 2594 aa12.49□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 TnxbO35452 4006 aa12.49□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 Smlr1J3QMJ4 66 aa12.49□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 Defb40Q70KL2 73 aa12.48□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 Igkv8-19A0A0G2JFN8 121 aa12.47□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 UqcrqQ9CQ69 82 aa12.47□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 SycnQ8VCK7 134 aa12.46□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 Serp1Q9Z1W5 66 aa12.46□□□□□ -0.41
Ccdc34-201ENSMUST00000028580 SnurfQ9WU12 71 aa12.46□□□□□ -0.42
Ccdc34-201ENSMUST00000028580 Gm4707V9GXN5 68 aa12.46□□□□□ -0.42
Ccdc34-201ENSMUST00000028580 Gm10139O88245 57 aa12.45□□□□□ -0.42
Ccdc34-201ENSMUST00000028580 1700018G05RikA0A1B0GSI2 66 aa12.43□□□□□ -0.42
Ccdc34-201ENSMUST00000028580 H2al1aQ5M8Q2 105 aa12.42□□□□□ -0.42
Ccdc34-201ENSMUST00000028580 Brk1Q91VR8 75 aa12.42□□□□□ -0.42
Ccdc34-201ENSMUST00000028580 Pet100P0DJE0 76 aa12.41□□□□□ -0.42
Ccdc34-201ENSMUST00000028580 Gm10837Q3UTT8 145 aa12.39□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Chchd10Q7TNL9 138 aa12.39□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Igkv3-10A0A0G2JGN0 119 aa12.39□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Defa28D3Z1V9 94 aa12.38□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Odf3bQ5M8M2 238 aa12.38□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Spink8Q09TK9 105 aa12.38□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Gm10570F6VB42 170 aa12.37□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 TgO08710 2766 aa12.37□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Gm21886J3QJU9 214 aa12.36□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 AI606181Q8C7B9 129 aa12.36□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Defa27F2Z403 93 aa12.34□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Gm17349F7BGH6 99 aa12.34□□□□□ -0.43
Ccdc34-201ENSMUST00000028580 Wfdc10Q3V2J9 124 aa12.33□□□□□ -0.44
Ccdc34-201ENSMUST00000028580 Csmd3Q80T79 3707 aa12.32□□□□□ -0.44
Ccdc34-201ENSMUST00000028580 Dync2h1Q45VK7 4306 aa12.32□□□□□ -0.44
Ccdc34-201ENSMUST00000028580 Coa6Q8BGD8 79 aa12.31□□□□□ -0.44
Ccdc34-201ENSMUST00000028580 Wfdc13Q5DQQ6 81 aa12.31□□□□□ -0.44
Ccdc34-201ENSMUST00000028580 Gm28230A0A0A0MQ91 144 aa12.3□□□□□ -0.44
Ccdc34-201ENSMUST00000028580 Phf5aP83870 110 aaKnown RBP12.3□□□□□ -0.44
Ccdc34-201ENSMUST00000028580 Gm9508A0A1W2P7W0 230 aa12.28□□□□□ -0.44
Ccdc34-201ENSMUST00000028580 Ube2aQ9Z255 152 aa12.27□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Spint4Q9D263 159 aa12.26□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Gm20604F8WIA3 75 aa12.25□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Reg3aO09037 175 aa12.23□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Nupr2Q497P3 102 aa12.22□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Q8K1L6 76 aa12.22□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Tenm2Q9WTS5 2764 aa12.22□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Igkv3-7A0A0G2JE31 119 aa12.21□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Dph3Q8K0W9 82 aa12.21□□□□□ -0.45
Ccdc34-201ENSMUST00000028580 Defb9Q8R2I6 67 aa12.2□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 A0A286YE49 62 aa12.19□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 1700012A03RikQ9DAF1 130 aa12.19□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 6030445D17RikE9Q8F9 148 aa12.18□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 A530084C06RikQ3UTW2 186 aa12.18□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 Huwe1Q7TMY8 4377 aaKnown RBP12.18□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 Gm10065F6TJM2 114 aa12.18□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 Gm27235Q3UW50 83 aa12.18□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 Atox1O08997 68 aaKnown RBP12.17□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 Megf8P60882 2789 aa12.17□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 Cdc42se1Q8BHL7 80 aa12.15□□□□□ -0.46
Ccdc34-201ENSMUST00000028580 Defb11Q8R2I7 77 aa12.14□□□□□ -0.47
Ccdc34-201ENSMUST00000028580 Gm2310J3QNJ2 377 aa12.13□□□□□ -0.47
Ccdc34-201ENSMUST00000028580 Muc6Q80T03 2850 aa12.12□□□□□ -0.47
Ccdc34-201ENSMUST00000028580 Stab2Q8R4U0 2559 aa12.12□□□□□ -0.47
Ccdc34-201ENSMUST00000028580 Igkv3-5A0A140T8M6 119 aa12.11□□□□□ -0.47
Ccdc34-201ENSMUST00000028580 Krtap29-1A2A5X4 342 aa12.1□□□□□ -0.47
Ccdc34-201ENSMUST00000028580 Rpl37aP61514 92 aa12.1□□□□□ -0.47
Ccdc34-201ENSMUST00000028580 Coa5Q99M07 74 aa12.08□□□□□ -0.48
Ccdc34-201ENSMUST00000028580 Dnah11E9Q7N9 4488 aa12.08□□□□□ -0.48
Ccdc34-201ENSMUST00000028580 Gm10337F7DEP7 55 aa12.07□□□□□ -0.48
Ccdc34-201ENSMUST00000028580 1700074P13RikQ9D9G7 251 aa12.06□□□□□ -0.48
Ccdc34-201ENSMUST00000028580 Dnah9B1AR51 4484 aa12.05□□□□□ -0.48
Ccdc34-201ENSMUST00000028580 Plac8Q9JI48 112 aa12.05□□□□□ -0.48
Ccdc34-201ENSMUST00000028580 Defb12Q8K4N3 78 aa12.03□□□□□ -0.48
Ccdc34-201ENSMUST00000028580 Gm10642Q3TWM1 71 aa12.02□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 Mrpl55Q9CZ83 127 aa11.99□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 H2al1bA0A087WP11 105 aa11.98□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 Gm10197F6QEY5 67 aa11.98□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 H2al1kJ3QP08 105 aa11.98□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 H2al1eQ810S6 105 aa11.98□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 H2al1mQ9DAD9 105 aa11.98□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 Fras1Q80T14 4010 aa11.97□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 FcgbpE9Q0B5 2583 aa11.96□□□□□ -0.49
Ccdc34-201ENSMUST00000028580 NbdyA0A0N4SUI7 68 aa11.95□□□□□ -0.5
Ccdc34-201ENSMUST00000028580 Pkd1l1Q8R526 2615 aa11.94□□□□□ -0.5
Ccdc34-201ENSMUST00000028580 Znf706Q9D115 76 aaKnown RBP11.93□□□□□ -0.5
Ccdc34-201ENSMUST00000028580 HrnrQ8VHD8 2496 aa11.92□□□□□ -0.5
Ccdc34-201ENSMUST00000028580 Cypt14J3QPF7 87 aa11.92□□□□□ -0.5
Ccdc34-201ENSMUST00000028580 Gm28374F6SG70 93 aa11.91□□□□□ -0.5
Ccdc34-201ENSMUST00000028580 Gm9918Q8BUR5 174 aa11.91□□□□□ -0.5
Ccdc34-201ENSMUST00000028580 Gm9507D3Z5T3 223 aa11.9□□□□□ -0.5
Ccdc34-201ENSMUST00000028580 PrkdcP97313 4128 aa11.89□□□□□ -0.51
Ccdc34-201ENSMUST00000028580 Chtf8P0CG14 533 aa11.88□□□□□ -0.51
Ccdc34-201ENSMUST00000028580 PlecQ9QXS1 4691 aaKnown RBP11.88□□□□□ -0.51
Ccdc34-201ENSMUST00000028580 FasnP19096 2504 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 61.5 ms