RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Gm37389A0A0A6YW05 95 aa11.73□□□□□ -0.53
Ccdc3-201ENSMUST00000027988 Mrpl34Q99N91 92 aa11.73□□□□□ -0.53
Ccdc3-201ENSMUST00000027988 Vpreb3D3Z6J4 130 aa11.73□□□□□ -0.53
Ccdc3-201ENSMUST00000027988 Defa27F2Z403 93 aa11.7□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Prol1E9PYQ4 312 aa11.7□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Muc6Q80T03 2850 aa11.7□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 1700018G05RikA0A1B0GSI2 66 aa11.69□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Gm17521F6QAC8 156 aa11.68□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Spink8Q09TK9 105 aa11.68□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 BaalcQ8VHV1 145 aa11.68□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Defa28D3Z1V9 94 aa11.67□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Ube2bP63147 152 aa11.67□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Igkv3-4A0A140T8Q4 119 aa11.67□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Gm10401E9Q3K6 71 aa11.67□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Dnah9B1AR51 4484 aa11.66□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Dnah11E9Q7N9 4488 aa11.66□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Igkv8-19A0A0G2JFN8 121 aa11.65□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Wfdc13Q5DQQ6 81 aa11.65□□□□□ -0.54
Ccdc3-201ENSMUST00000027988 Gm10570F6VB42 170 aa11.63□□□□□ -0.55
Ccdc3-201ENSMUST00000027988 2310061N02RikQ9D6S9 174 aa11.63□□□□□ -0.55
Ccdc3-201ENSMUST00000027988 U90926O08546 118 aa11.62□□□□□ -0.55
Ccdc3-201ENSMUST00000027988 Stab2Q8R4U0 2559 aa11.61□□□□□ -0.55
Ccdc3-201ENSMUST00000027988 Serp1Q9Z1W5 66 aa11.6□□□□□ -0.55
Ccdc3-201ENSMUST00000027988 Fam104aA2A6P4 185 aa11.59□□□□□ -0.55
Ccdc3-201ENSMUST00000027988 Odf3bQ5M8M2 238 aa11.59□□□□□ -0.55
Ccdc3-201ENSMUST00000027988 Gm37013Q8K491 104 aa11.59□□□□□ -0.55
Ccdc3-201ENSMUST00000027988 Dync2h1Q45VK7 4306 aa11.58□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 Pet100P0DJE0 76 aa11.57□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 Tenm2Q9WTS5 2764 aa11.57□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 Gm21886J3QJU9 214 aa11.56□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 H2al1aQ5M8Q2 105 aa11.56□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 UqcrqQ9CQ69 82 aa11.56□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 Huwe1Q7TMY8 4377 aaKnown RBP11.55□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 A530084C06RikQ3UTW2 186 aa11.54□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 Defb12Q8K4N3 78 aa11.53□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 FasnP19096 2504 aaKnown RBP11.53□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 Defb10Q8R2I8 73 aa11.53□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 Igsf10Q3V1M1 2594 aa11.53□□□□□ -0.56
Ccdc3-201ENSMUST00000027988 Gm10837Q3UTT8 145 aa11.51□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Dph3Q8K0W9 82 aa11.51□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 SycnQ8VCK7 134 aa11.51□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Reg3aO09037 175 aa11.51□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Phf5aP83870 110 aaKnown RBP11.51□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Gm10139O88245 57 aa11.49□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 B9d2Q3UK10 175 aa11.48□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Rpl37aP61514 92 aa11.47□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Spata3Q9D9T6 193 aa11.47□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Igkv3-10A0A0G2JGN0 119 aa11.46□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Coa6Q8BGD8 79 aa11.46□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Zcchc13Q9D548 170 aa11.46□□□□□ -0.57
Ccdc3-201ENSMUST00000027988 Gm28230A0A0A0MQ91 144 aa11.46□□□□□ -0.58
Ccdc3-201ENSMUST00000027988 Pkd1l1Q8R526 2615 aa11.45□□□□□ -0.58
Ccdc3-201ENSMUST00000027988 Igkv3-7A0A0G2JE31 119 aa11.45□□□□□ -0.58
Ccdc3-201ENSMUST00000027988 Gm12353A2AGJ4 60 aa11.44□□□□□ -0.58
Ccdc3-201ENSMUST00000027988 Spint4Q9D263 159 aa11.43□□□□□ -0.58
Ccdc3-201ENSMUST00000027988 Fras1Q80T14 4010 aa11.4□□□□□ -0.59
Ccdc3-201ENSMUST00000027988 PrkdcP97313 4128 aa11.39□□□□□ -0.59
Ccdc3-201ENSMUST00000027988 TnxbO35452 4006 aa11.39□□□□□ -0.59
Ccdc3-201ENSMUST00000027988 Gm17349F7BGH6 99 aa11.38□□□□□ -0.59
Ccdc3-201ENSMUST00000027988 Ube2aQ9Z255 152 aa11.38□□□□□ -0.59
Ccdc3-201ENSMUST00000027988 Defb9Q8R2I6 67 aa11.36□□□□□ -0.59
Ccdc3-201ENSMUST00000027988 Plac8Q9JI48 112 aa11.34□□□□□ -0.59
Ccdc3-201ENSMUST00000027988 Mrpl55Q9CZ83 127 aa11.34□□□□□ -0.59
Ccdc3-201ENSMUST00000027988 A0A286YE49 62 aa11.33□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Coa5Q99M07 74 aa11.33□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Wfdc10Q3V2J9 124 aa11.32□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 1700074P13RikQ9D9G7 251 aa11.32□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 PlecQ9QXS1 4691 aaKnown RBP11.32□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 6030445D17RikE9Q8F9 148 aa11.32□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Gm9507D3Z5T3 223 aa11.31□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Gm10197F6QEY5 67 aa11.31□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Cdc42se1Q8BHL7 80 aa11.31□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Gm10337F7DEP7 55 aa11.3□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Chchd10Q7TNL9 138 aa11.3□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Nupr2Q497P3 102 aa11.3□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 AI606181Q8C7B9 129 aa11.3□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Dnah5Q8VHE6 4621 aa11.29□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Atox1O08997 68 aaKnown RBP11.27□□□□□ -0.6
Ccdc3-201ENSMUST00000027988 Gm2310J3QNJ2 377 aa11.26□□□□□ -0.61
Ccdc3-201ENSMUST00000027988 AW011738F6S7Q2 159 aa11.26□□□□□ -0.61
Ccdc3-201ENSMUST00000027988 1700012A03RikQ9DAF1 130 aa11.25□□□□□ -0.61
Ccdc3-201ENSMUST00000027988 Gm10642Q3TWM1 71 aa11.25□□□□□ -0.61
Ccdc3-201ENSMUST00000027988 Dnah7cA0A087WR13 4024 aa11.24□□□□□ -0.61
Ccdc3-201ENSMUST00000027988 Igkv3-5A0A140T8M6 119 aa11.21□□□□□ -0.61
Ccdc3-201ENSMUST00000027988 Gm10267M0QWD8 85 aa11.2□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 Gm27235Q3UW50 83 aa11.18□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 Chtf8P0CG14 533 aa11.17□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 Gm9918Q8BUR5 174 aa11.17□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 Gm28374F6SG70 93 aa11.16□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 Anapc11Q9CPX9 84 aa11.16□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 H2al1bA0A087WP11 105 aa11.15□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 H2al1kJ3QP08 105 aa11.15□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 H2al1eQ810S6 105 aa11.15□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 H2al1mQ9DAD9 105 aa11.15□□□□□ -0.62
Ccdc3-201ENSMUST00000027988 Bean1Q9EQG5 255 aa11.13□□□□□ -0.63
Ccdc3-201ENSMUST00000027988 Dnah7aE9Q0T8 4024 aa11.1□□□□□ -0.63
Ccdc3-201ENSMUST00000027988 Krtap29-1A2A5X4 342 aa11.1□□□□□ -0.63
Ccdc3-201ENSMUST00000027988 Defb38Q7TNV7 63 aa11.1□□□□□ -0.63
Ccdc3-201ENSMUST00000027988 Gm10065F6TJM2 114 aa11.09□□□□□ -0.63
Ccdc3-201ENSMUST00000027988 Gm4707V9GXN5 68 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms