RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Vps13aQ5H8C4 3166 aa9.61□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Szt2A2A9C3 3431 aa9.6□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Plac8Q9JI48 112 aa9.6□□□□□ -0.87
Col2a1-201ENSMUST00000023123 CriptO70333 101 aa9.6□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Gm3233E9Q2H5 230 aa9.59□□□□□ -0.87
Col2a1-201ENSMUST00000023123 HrnrQ8VHD8 2496 aa9.59□□□□□ -0.87
Col2a1-201ENSMUST00000023123 Prrc2cQ3TLH4 2846 aaKnown RBP9.58□□□□□ -0.88
Col2a1-201ENSMUST00000023123 Nsd1O88491 2588 aaKnown RBP9.58□□□□□ -0.88
Col2a1-201ENSMUST00000023123 Map1aQ9QYR6 2776 aa9.57□□□□□ -0.88
Col2a1-201ENSMUST00000023123 6030445D17RikE9Q8F9 148 aa9.56□□□□□ -0.88
Col2a1-201ENSMUST00000023123 Kmt2bO08550 2713 aa9.55□□□□□ -0.88
Col2a1-201ENSMUST00000023123 Gm20538F6Z9R1 75 aa9.55□□□□□ -0.88
Col2a1-201ENSMUST00000023123 Notch1Q01705 2531 aa9.54□□□□□ -0.88
Col2a1-201ENSMUST00000023123 Gm9195A0A140LHT4 2805 aa9.53□□□□□ -0.88
Col2a1-201ENSMUST00000023123 Ash1lQ99MY8 2958 aa9.51□□□□□ -0.89
Col2a1-201ENSMUST00000023123 Gm3880A0A1B0GSB3 72 aa9.51□□□□□ -0.89
Col2a1-201ENSMUST00000023123 Gm9955Q8CEJ8 102 aa9.51□□□□□ -0.89
Col2a1-201ENSMUST00000023123 NbdyA0A0N4SUI7 68 aa9.5□□□□□ -0.89
Col2a1-201ENSMUST00000023123 Gm10065F6TJM2 114 aa9.5□□□□□ -0.89
Col2a1-201ENSMUST00000023123 Gm11565A2A4M7 156 aa9.5□□□□□ -0.89
Col2a1-201ENSMUST00000023123 A730071L15RikQ8C4X0 137 aa9.46□□□□□ -0.9
Col2a1-201ENSMUST00000023123 AspmQ8CJ27 3122 aa9.46□□□□□ -0.9
Col2a1-201ENSMUST00000023123 Ranbp2Q9ERU9 3053 aaKnown RBP9.45□□□□□ -0.9
Col2a1-201ENSMUST00000023123 Lrrc37aB1AWG4 3215 aa9.45□□□□□ -0.9
Col2a1-201ENSMUST00000023123 Stab1Q8R4Y4 2571 aa9.44□□□□□ -0.9
Col2a1-201ENSMUST00000023123 Gm10139O88245 57 aa9.44□□□□□ -0.9
Col2a1-201ENSMUST00000023123 Gm3646F6S692 53 aa9.43□□□□□ -0.9
Col2a1-201ENSMUST00000023123 Mast4Q811L6 2618 aa9.38□□□□□ -0.91
Col2a1-201ENSMUST00000023123 Odf3bQ5M8M2 238 aa9.37□□□□□ -0.91
Col2a1-201ENSMUST00000023123 Unc80Q8BLN6 3261 aa9.37□□□□□ -0.91
Col2a1-201ENSMUST00000023123 Gm4491E0CX42 125 aa9.37□□□□□ -0.91
Col2a1-201ENSMUST00000023123 Sprr1aQ62266 144 aa9.36□□□□□ -0.91
Col2a1-201ENSMUST00000023123 NipblQ6KCD5 2798 aaKnown RBP9.36□□□□□ -0.91
Col2a1-201ENSMUST00000023123 Akap13E9Q394 2776 aa9.36□□□□□ -0.91
Col2a1-201ENSMUST00000023123 OxtP35454 125 aa9.34□□□□□ -0.91
Col2a1-201ENSMUST00000023123 Muc2Q80Z19 2680 aa9.34□□□□□ -0.91
Col2a1-201ENSMUST00000023123 Gm37013Q8K491 104 aa9.33□□□□□ -0.92
Col2a1-201ENSMUST00000023123 Ubr5Q80TP3 2792 aa9.32□□□□□ -0.92
Col2a1-201ENSMUST00000023123 Itpr3P70227 2670 aa9.31□□□□□ -0.92
Col2a1-201ENSMUST00000023123 Gm7138L7N2C3 230 aa9.3□□□□□ -0.92
Col2a1-201ENSMUST00000023123 Gm3238W4VSP7 230 aa9.3□□□□□ -0.92
Col2a1-201ENSMUST00000023123 Gm16253D3Z167 63 aa9.28□□□□□ -0.92
Col2a1-201ENSMUST00000023123 Pla2g10Q9QXX3 151 aa9.28□□□□□ -0.92
Col2a1-201ENSMUST00000023123 SmcpP15265 143 aa9.27□□□□□ -0.93
Col2a1-201ENSMUST00000023123 4933415A04RikQ9D443 101 aa9.24□□□□□ -0.93
Col2a1-201ENSMUST00000023123 Gm9821Q8K076 103 aa9.24□□□□□ -0.93
Col2a1-201ENSMUST00000023123 1700042G07RikB1AUF7 90 aa9.24□□□□□ -0.93
Col2a1-201ENSMUST00000023123 Gm7137J3QMW1 236 aa9.23□□□□□ -0.93
Col2a1-201ENSMUST00000023123 Igsf10Q3V1M1 2594 aa9.23□□□□□ -0.93
Col2a1-201ENSMUST00000023123 FrylF8VQ05 3007 aa9.22□□□□□ -0.93
Col2a1-201ENSMUST00000023123 Wdfy4E9Q2M9 3149 aa9.21□□□□□ -0.93
Col2a1-201ENSMUST00000023123 Chd6A3KFM7 2711 aa9.2□□□□□ -0.94
Col2a1-201ENSMUST00000023123 Celsr1O35161 3034 aa9.18□□□□□ -0.94
Col2a1-201ENSMUST00000023123 Lama1P19137 3084 aa9.18□□□□□ -0.94
Col2a1-201ENSMUST00000023123 Spink7Q6IE32 76 aa9.15□□□□□ -0.94
Col2a1-201ENSMUST00000023123 FryE9Q8I9 3020 aa9.15□□□□□ -0.94
Col2a1-201ENSMUST00000023123 BptfA2A654 3036 aaKnown RBP9.15□□□□□ -0.94
Col2a1-201ENSMUST00000023123 Col6a5A6H584 2640 aa9.11□□□□□ -0.95
Col2a1-201ENSMUST00000023123 Col6a3E9PWQ3 3284 aa9.1□□□□□ -0.95
Col2a1-201ENSMUST00000023123 NbeaQ9EPN1 2936 aa9.1□□□□□ -0.95
Col2a1-201ENSMUST00000023123 Frem2Q6NVD0 3160 aa9.09□□□□□ -0.95
Col2a1-201ENSMUST00000023123 Celsr3Q91ZI0 3301 aa9.09□□□□□ -0.95
Col2a1-201ENSMUST00000023123 Dmxl2Q8BPN8 3032 aa9.08□□□□□ -0.96
Col2a1-201ENSMUST00000023123 Rpl37Q9D823 97 aa9.08□□□□□ -0.96
Col2a1-201ENSMUST00000023123 Gm9508A0A1W2P7W0 230 aa9.07□□□□□ -0.96
Col2a1-201ENSMUST00000023123 Nbeal2Q6ZQA0 2742 aa9.07□□□□□ -0.96
Col2a1-201ENSMUST00000023123 Romo1P60603 79 aa9.05□□□□□ -0.96
Col2a1-201ENSMUST00000023123 Brca2P97929 3329 aa9.05□□□□□ -0.96
Col2a1-201ENSMUST00000023123 Tep1P97499 2629 aa9.04□□□□□ -0.96
Col2a1-201ENSMUST00000023123 Hivep1Q03172 2688 aa9.04□□□□□ -0.96
Col2a1-201ENSMUST00000023123 Krtap15-1Q9QZU5 150 aa9.01□□□□□ -0.97
Col2a1-201ENSMUST00000023123 Adgrg4B7ZCC9 3073 aa9□□□□□ -0.97
Col2a1-201ENSMUST00000023123 Gm36176A0A1W2P8D5 158 aa9□□□□□ -0.97
Col2a1-201ENSMUST00000023123 Pkd1l1Q8R526 2615 aa8.99□□□□□ -0.97
Col2a1-201ENSMUST00000023123 Krtap29-1A2A5X4 342 aa8.98□□□□□ -0.97
Col2a1-201ENSMUST00000023123 Utp20Q5XG71 2788 aaKnown RBP8.97□□□□□ -0.97
Col2a1-201ENSMUST00000023123 DspE9Q557 2883 aaKnown RBP8.97□□□□□ -0.97
Col2a1-201ENSMUST00000023123 VcanQ62059 3357 aa8.96□□□□□ -0.97
Col2a1-201ENSMUST00000023123 Gm2310J3QNJ2 377 aa8.95□□□□□ -0.98
Col2a1-201ENSMUST00000023123 Camk2n1Q6QWF9 78 aa8.95□□□□□ -0.98
Col2a1-201ENSMUST00000023123 Gm17349F7BGH6 99 aa8.93□□□□□ -0.98
Col2a1-201ENSMUST00000023123 9530053A07RikE9PVG8 2581 aa8.93□□□□□ -0.98
Col2a1-201ENSMUST00000023123 Stab2Q8R4U0 2559 aa8.93□□□□□ -0.98
Col2a1-201ENSMUST00000023123 Gm10382Q3V0T5 144 aa8.92□□□□□ -0.98
Col2a1-201ENSMUST00000023123 Dchs2A0A0A6YW72 3346 aa8.91□□□□□ -0.98
Col2a1-201ENSMUST00000023123 FlncQ8VHX6 2726 aaKnown RBP8.89□□□□□ -0.99
Col2a1-201ENSMUST00000023123 Gm5767A0A0J9YTU8 78 aa8.86□□□□□ -0.99
Col2a1-201ENSMUST00000023123 Fam229aB2KGE5 128 aa8.83□□□□□ -1
Col2a1-201ENSMUST00000023123 Itpr2Q9Z329 2701 aa8.83□□□□□ -1
Col2a1-201ENSMUST00000023123 2310050C09RikG5E8Z3 280 aa8.83□□□□□ -1
Col2a1-201ENSMUST00000023123 BC029722A0A0N4SW31 51 aa8.81□□□□□ -1
Col2a1-201ENSMUST00000023123 Igfn1Q3KNY0 2849 aa8.79□□□□□ -1
Col2a1-201ENSMUST00000023123 Tex15F8VPN2 2785 aa8.79□□□□□ -1
Col2a1-201ENSMUST00000023123 Cox6b2Q80ZN9 88 aa8.78□□□□□ -1
Col2a1-201ENSMUST00000023123 Sec61bQ9CQS8 96 aaKnown RBP8.75□□□□□ -1.01
Col2a1-201ENSMUST00000023123 Krtap13O88375 197 aa8.74□□□□□ -1.01
Col2a1-201ENSMUST00000023123 Zzef1Q5SSH7 2924 aa8.74□□□□□ -1.01
Col2a1-201ENSMUST00000023123 Dchs1E9PVD3 3291 aa8.74□□□□□ -1.01
Col2a1-201ENSMUST00000023123 Wdfy3Q6VNB8 3508 aa8.71□□□□□ -1.02
Col2a1-201ENSMUST00000023123 Gm19426M0QWC7 77 aa8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 247.1 ms